Gene annotation
Transcriptome id Sobic.008G137100.1
Synonym
Functional annotation RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt A0A1B6PDL0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g38340.1 : RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
2 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
4 Sobic.006G083700 expressed protein -
5 Sobic.010G053900 RING-H2 finger protein, putative, expressed -
6 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
7 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
8 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
11 Sobic.008G059800 expressed protein -
12 Sobic.002G276600 endoglucanase, putative, expressed -
13 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
14 Sobic.001G195000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
15 Sobic.004G284200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G316000 protein kinase domain containing protein, expressed -
17 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.008G137000 RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
19 Sobic.003G236701 - -
20 Sobic.001G344500 sucrose synthase(PubMedID : 26616172)@sucrose synthase, putative, expressed K00695: sucrose synthase


Gene co-expression network
sample Sobic008G137100 Sobic008G137100 Sobic001G468300 Sobic001G468300 Sobic008G137100--Sobic001G468300 Sobic008G112200 Sobic008G112200 Sobic008G137100--Sobic008G112200 Sobic009G226900 Sobic009G226900 Sobic008G137100--Sobic009G226900 Sobic006G083700 Sobic006G083700 Sobic008G137100--Sobic006G083700 Sobic010G053900 Sobic010G053900 Sobic008G137100--Sobic010G053900 Sobic010G199700 Sobic010G199700 Sobic008G137100--Sobic010G199700 Sobic005G087200 Sobic005G087200 Sobic008G137100--Sobic005G087200 Sobic004G168700 Sobic004G168700 Sobic008G137100--Sobic004G168700 Sobic009G211800 Sobic009G211800 Sobic008G137100--Sobic009G211800 Sobic003G236701 Sobic003G236701 Sobic001G468300--Sobic003G236701 Sobic009G048000 Sobic009G048000 Sobic001G468300--Sobic009G048000 Sobic006G066500 Sobic006G066500 Sobic001G468300--Sobic006G066500 Sobic001G468300--Sobic010G199700 Sobic009G241600 Sobic009G241600 Sobic001G468300--Sobic009G241600 Sobic002G332300 Sobic002G332300 Sobic001G468300--Sobic002G332300 Sobic003G112200 Sobic003G112200 Sobic001G468300--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic001G468300--Sobic006G226200 Sobic008G059800 Sobic008G059800 Sobic001G468300--Sobic008G059800 Sobic008G112200--Sobic010G199700 Sobic008G112200--Sobic009G241600 Sobic008G112200--Sobic008G059800 Sobic001G066900 Sobic001G066900 Sobic008G112200--Sobic001G066900 Sobic008G112200--Sobic003G236701 Sobic009G153800 Sobic009G153800 Sobic008G112200--Sobic009G153800 Sobic008G112200--Sobic001G468300 Sobic002G164600 Sobic002G164600 Sobic008G112200--Sobic002G164600 Sobic008G112200--Sobic009G226900 Sobic003G062000 Sobic003G062000 Sobic009G226900--Sobic003G062000 Sobic001G224300 Sobic001G224300 Sobic009G226900--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic009G226900--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic006G036400 Sobic006G036400 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000 Sobic001G201000 Sobic001G201000 Sobic006G083700--Sobic001G201000 Sobic001G285200 Sobic001G285200 Sobic006G083700--Sobic001G285200 Sobic001G437500 Sobic001G437500 Sobic006G083700--Sobic001G437500 Sobic003G135400 Sobic003G135400 Sobic006G083700--Sobic003G135400 Sobic005G055600 Sobic005G055600 Sobic006G083700--Sobic005G055600 Sobic004G243800 Sobic004G243800 Sobic006G083700--Sobic004G243800 Sobic001G196000 Sobic001G196000 Sobic006G083700--Sobic001G196000 Sobic009G206500 Sobic009G206500 Sobic006G083700--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic006G083700--Sobic004G274800 Sobic001G023500 Sobic001G023500 Sobic010G053900--Sobic001G023500 Sobic006G202800 Sobic006G202800 Sobic010G053900--Sobic006G202800 Sobic005G076400 Sobic005G076400 Sobic010G053900--Sobic005G076400 Sobic004G028900 Sobic004G028900 Sobic010G053900--Sobic004G028900 Sobic001G037400 Sobic001G037400 Sobic010G053900--Sobic001G037400 Sobic010G053900--Sobic001G285200 Sobic001G154300 Sobic001G154300 Sobic010G053900--Sobic001G154300 Sobic008G039800 Sobic008G039800 Sobic010G053900--Sobic008G039800 Sobic006G267500 Sobic006G267500 Sobic010G053900--Sobic006G267500 Sobic010G199700--Sobic009G241600 Sobic010G199700--Sobic008G112200 Sobic007G027200 Sobic007G027200 Sobic010G199700--Sobic007G027200 Sobic010G199700--Sobic008G059800 Sobic003G153400 Sobic003G153400 Sobic010G199700--Sobic003G153400 Sobic010G199700--Sobic001G468300 Sobic010G199700--Sobic003G236701 Sobic006G166800 Sobic006G166800 Sobic010G199700--Sobic006G166800 Sobic010G199700--Sobic009G153800 Sobic005G087200--Sobic003G387500 Sobic005G087200--Sobic009G226900 Sobic005G087200--Sobic002G164600 Sobic005G087200--Sobic003G236701 Sobic005G087200--Sobic003G112200 Sobic001G336700 Sobic001G336700 Sobic005G087200--Sobic001G336700 Sobic005G087200--Sobic001G406700 Sobic005G087200--Sobic009G241600 Sobic005G087200--Sobic008G112200 Sobic010G086800 Sobic010G086800 Sobic004G168700--Sobic010G086800 Sobic009G032600 Sobic009G032600 Sobic004G168700--Sobic009G032600 Sobic009G232200 Sobic009G232200 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic004G168700--Sobic009G211800 Sobic002G072200 Sobic002G072200 Sobic004G168700--Sobic002G072200 Sobic004G168700--Sobic004G243800 Sobic004G168700--Sobic009G226900 Sobic003G108000 Sobic003G108000 Sobic004G168700--Sobic003G108000 Sobic009G211800--Sobic004G243800 Sobic009G211800--Sobic008G039800 Sobic003G277200 Sobic003G277200 Sobic009G211800--Sobic003G277200 Sobic009G211800--Sobic001G037400 Sobic002G045200 Sobic002G045200 Sobic009G211800--Sobic002G045200 Sobic009G211800--Sobic004G168700 Sobic009G211800--Sobic001G201000 Sobic007G107950 Sobic007G107950 Sobic009G211800--Sobic007G107950 Sobic010G211800 Sobic010G211800 Sobic009G211800--Sobic010G211800
Octagon: transcription factors


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