Gene annotation
Transcriptome id Sobic.004G284200.1
Synonym Sb04g032030
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y1A0
Pfam -
Panther DB PTHR33676
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g45225.1 : expressed protein
MaizeGDB (Corn) Zm00025a032301
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
2 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
3 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.010G112800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
6 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
7 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.007G043800 expressed protein -
9 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
10 Sobic.002G103200 - -
11 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
12 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
13 Sobic.008G137100 RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
14 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
15 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.003G430000 eukaryotic aspartyl protease domain containing protein, expressed -
17 Sobic.001G336700 "Involved in secondary cell wall formation. Reduced mechanical strength in culms and leaves, thinner cell walls, reduced cellulose content, increased lignin content, in the mutant. The highest gene expression level in culms. The highest expression levels in vascular bundles and in sub-epidermal regions, where developing sclerenchyma cells are located."(PubMedID : 30590744)@COBRA-like protein precursor, putative, expressed -
18 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.003G236701 - -
20 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic004G284200 Sobic004G284200 Sobic007G027200 Sobic007G027200 Sobic004G284200--Sobic007G027200 Sobic009G241600 Sobic009G241600 Sobic004G284200--Sobic009G241600 Sobic006G166800 Sobic006G166800 Sobic004G284200--Sobic006G166800 Sobic003G153400 Sobic003G153400 Sobic004G284200--Sobic003G153400 Sobic010G112800 Sobic010G112800 Sobic004G284200--Sobic010G112800 Sobic001G468300 Sobic001G468300 Sobic004G284200--Sobic001G468300 Sobic003G352800 Sobic003G352800 Sobic004G284200--Sobic003G352800 Sobic007G043800 Sobic007G043800 Sobic004G284200--Sobic007G043800 Sobic001G510200 Sobic001G510200 Sobic004G284200--Sobic001G510200 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic002G394700 Sobic002G394700 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic010G199700 Sobic010G199700 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic009G162800 Sobic009G162800 Sobic007G027200--Sobic009G162800 Sobic007G027200--Sobic007G043800 Sobic003G236701 Sobic003G236701 Sobic009G241600--Sobic003G236701 Sobic009G241600--Sobic007G027200 Sobic006G066500 Sobic006G066500 Sobic009G241600--Sobic006G066500 Sobic008G059800 Sobic008G059800 Sobic009G241600--Sobic008G059800 Sobic002G164600 Sobic002G164600 Sobic009G241600--Sobic002G164600 Sobic009G241600--Sobic010G199700 Sobic008G112200 Sobic008G112200 Sobic009G241600--Sobic008G112200 Sobic003G112200 Sobic003G112200 Sobic009G241600--Sobic003G112200 Sobic009G241600--Sobic006G166800 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic010G196400 Sobic010G196400 Sobic006G166800--Sobic010G196400 Sobic006G166800--Sobic007G043800 Sobic006G166800--Sobic009G241600 Sobic003G153400--Sobic006G166800 Sobic003G153400--Sobic007G027200 Sobic008G173200 Sobic008G173200 Sobic003G153400--Sobic008G173200 Sobic003G153400--Sobic010G199700 Sobic009G151000 Sobic009G151000 Sobic003G153400--Sobic009G151000 Sobic003G153400--Sobic010G196400 Sobic003G153400--Sobic009G162800 Sobic003G153400--Sobic007G043800 Sobic003G153400--Sobic010G112800 Sobic010G112800--Sobic003G153400 Sobic007G001900 Sobic007G001900 Sobic010G112800--Sobic007G001900 Sobic001G336700 Sobic001G336700 Sobic010G112800--Sobic001G336700 Sobic010G112800--Sobic009G241600 Sobic009G226900 Sobic009G226900 Sobic010G112800--Sobic009G226900 Sobic010G112800--Sobic006G166800 Sobic010G112800--Sobic003G352800 Sobic010G112800--Sobic007G027200 Sobic005G087200 Sobic005G087200 Sobic010G112800--Sobic005G087200 Sobic001G468300--Sobic003G236701 Sobic009G048000 Sobic009G048000 Sobic001G468300--Sobic009G048000 Sobic001G468300--Sobic006G066500 Sobic001G468300--Sobic010G199700 Sobic001G468300--Sobic009G241600 Sobic002G332300 Sobic002G332300 Sobic001G468300--Sobic002G332300 Sobic001G468300--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic001G468300--Sobic006G226200 Sobic001G468300--Sobic008G059800 Sobic003G352800--Sobic006G166800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic002G003200 Sobic002G003200 Sobic003G352800--Sobic002G003200 Sobic003G352800--Sobic009G241600 Sobic003G352800--Sobic008G059800 Sobic009G153800 Sobic009G153800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic003G352800--Sobic010G196400 Sobic007G043800--Sobic002G394700 Sobic006G125600 Sobic006G125600 Sobic007G043800--Sobic006G125600 Sobic007G095000 Sobic007G095000 Sobic007G043800--Sobic007G095000 Sobic003G071300 Sobic003G071300 Sobic007G043800--Sobic003G071300 Sobic010G108200 Sobic010G108200 Sobic007G043800--Sobic010G108200 Sobic005G135400 Sobic005G135400 Sobic007G043800--Sobic005G135400 Sobic010G124500 Sobic010G124500 Sobic007G043800--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic007G043800--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic007G043800--Sobic005G135800 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic001G510200--Sobic002G394700 Sobic001G221400 Sobic001G221400 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic002G039400 Sobic002G039400 Sobic001G510200--Sobic002G039400 Sobic001G510200--Sobic006G125600 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200
Octagon: transcription factors


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