Gene annotation
Transcriptome id Sobic.008G149200.6,Sobic.008G149200.4,Sobic.008G149200.3,Sobic.008G149200.5,Sobic.008G149200.7,Sobic.008G149200.2
Synonym Sb08g019910
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
vegetative storage protein, putative, expressed
UniProt A0A1Z5R6T3 , C5YQX3
Pfam PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF549
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68930 : pentatricopeptide (PPR) repeat-containing protein
RAP-DB (Rice) LOC_Os05g06150.1 : vegetative storage protein, putative, expressed
MaizeGDB (Corn) Zm00025a004491
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
2 Sobic.010G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.001G347100 tetratricopeptide-like helical, putative, expressed -
4 Sobic.008G165200 OsFBX358 - F-box domain containing protein, expressed -
5 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
6 Sobic.008G041000 expressed protein -
7 Sobic.009G063500 OsWAK75 - OsWAK receptor-like protein kinase, expressed -
8 Sobic.006G085900 pentatricopeptide, putative, expressed -
9 Sobic.001G149100 vegetative storage protein, putative, expressed -
10 Sobic.003G142400 pentatricopeptide, putative, expressed -
11 Sobic.004G241000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
12 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.007G038700 zinc finger, C3HC4 type domain containing protein, expressed K11985: TRAIP, TRAF-interacting protein
14 Sobic.001G122200 zinc finger protein, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
15 Sobic.003G299200 pentatricopeptide, putative, expressed -
16 Sobic.008G009300 pentatricopeptide, putative, expressed -
17 Sobic.010G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.008G031200 pentatricopeptide, putative, expressed -
19 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1


Gene co-expression network
sample Sobic008G149200 Sobic008G149200 Sobic002G084400 Sobic002G084400 Sobic008G149200--Sobic002G084400 Sobic010G232700 Sobic010G232700 Sobic008G149200--Sobic010G232700 Sobic001G347100 Sobic001G347100 Sobic008G149200--Sobic001G347100 Sobic008G165200 Sobic008G165200 Sobic008G149200--Sobic008G165200 Sobic008G163400 Sobic008G163400 Sobic008G149200--Sobic008G163400 Sobic008G041000 Sobic008G041000 Sobic008G149200--Sobic008G041000 Sobic009G063500 Sobic009G063500 Sobic008G149200--Sobic009G063500 Sobic006G085900 Sobic006G085900 Sobic008G149200--Sobic006G085900 Sobic001G149100 Sobic001G149100 Sobic008G149200--Sobic001G149100 Sobic002G084400--Sobic010G232700 Sobic002G084400--Sobic008G041000 Sobic002G084400--Sobic006G085900 Sobic002G251800 Sobic002G251800 Sobic002G084400--Sobic002G251800 Sobic005G028300 Sobic005G028300 Sobic002G084400--Sobic005G028300 Sobic006G069100 Sobic006G069100 Sobic002G084400--Sobic006G069100 Sobic008G031200 Sobic008G031200 Sobic002G084400--Sobic008G031200 Sobic008G171500 Sobic008G171500 Sobic002G084400--Sobic008G171500 Sobic003G067201 Sobic003G067201 Sobic002G084400--Sobic003G067201 Sobic010G232700--Sobic002G084400 Sobic010G232700--Sobic008G041000 Sobic010G232700--Sobic006G085900 Sobic010G232700--Sobic008G171500 Sobic003G203100 Sobic003G203100 Sobic010G232700--Sobic003G203100 Sobic004G241000 Sobic004G241000 Sobic010G232700--Sobic004G241000 Sobic010G232700--Sobic006G069100 Sobic010G232700--Sobic005G028300 Sobic004G256900 Sobic004G256900 Sobic010G232700--Sobic004G256900 Sobic001G347100--Sobic001G149100 Sobic001G391101 Sobic001G391101 Sobic001G347100--Sobic001G391101 Sobic001G081300 Sobic001G081300 Sobic001G347100--Sobic001G081300 Sobic009G238700 Sobic009G238700 Sobic001G347100--Sobic009G238700 Sobic007G179600 Sobic007G179600 Sobic001G347100--Sobic007G179600 Sobic003G299200 Sobic003G299200 Sobic001G347100--Sobic003G299200 Sobic001G347100--Sobic004G241000 Sobic001G347100--Sobic006G069100 Sobic009G155400 Sobic009G155400 Sobic001G347100--Sobic009G155400 Sobic001G212600 Sobic001G212600 Sobic008G165200--Sobic001G212600 Sobic007G031300 Sobic007G031300 Sobic008G165200--Sobic007G031300 Sobic010G020900 Sobic010G020900 Sobic008G165200--Sobic010G020900 Sobic008G169400 Sobic008G169400 Sobic008G165200--Sobic008G169400 Sobic003G153900 Sobic003G153900 Sobic008G165200--Sobic003G153900 Sobic001G296800 Sobic001G296800 Sobic008G165200--Sobic001G296800 Sobic009G024900 Sobic009G024900 Sobic008G165200--Sobic009G024900 Sobic001G079900 Sobic001G079900 Sobic008G165200--Sobic001G079900 Sobic003G351900 Sobic003G351900 Sobic008G165200--Sobic003G351900 Sobic003G239000 Sobic003G239000 Sobic008G163400--Sobic003G239000 Sobic008G163400--Sobic004G241000 Sobic008G163400--Sobic009G155400 Sobic009G116400 Sobic009G116400 Sobic008G163400--Sobic009G116400 Sobic008G163400--Sobic004G256900 Sobic006G262800 Sobic006G262800 Sobic008G163400--Sobic006G262800 Sobic001G122200 Sobic001G122200 Sobic008G163400--Sobic001G122200 Sobic002G267600 Sobic002G267600 Sobic008G163400--Sobic002G267600 Sobic008G163400--Sobic001G149100 Sobic008G041000--Sobic002G084400 Sobic008G041000--Sobic010G232700 Sobic008G041000--Sobic006G085900 Sobic008G041000--Sobic003G203100 Sobic008G041000--Sobic005G028300 Sobic008G041000--Sobic002G251800 Sobic002G389200 Sobic002G389200 Sobic008G041000--Sobic002G389200 Sobic009G134400 Sobic009G134400 Sobic008G041000--Sobic009G134400 Sobic008G041000--Sobic006G069100 Sobic001G242300 Sobic001G242300 Sobic009G063500--Sobic001G242300 Sobic008G082800 Sobic008G082800 Sobic009G063500--Sobic008G082800 Sobic009G063500--Sobic008G031200 Sobic009G063500--Sobic006G085900 Sobic009G063500--Sobic008G169400 Sobic006G262700 Sobic006G262700 Sobic009G063500--Sobic006G262700 Sobic003G397100 Sobic003G397100 Sobic009G063500--Sobic003G397100 Sobic009G063500--Sobic004G241000 Sobic010G143600 Sobic010G143600 Sobic009G063500--Sobic010G143600 Sobic006G085900--Sobic004G241000 Sobic010G068900 Sobic010G068900 Sobic006G085900--Sobic010G068900 Sobic006G085900--Sobic009G155400 Sobic006G085900--Sobic006G069100 Sobic002G172500 Sobic002G172500 Sobic006G085900--Sobic002G172500 Sobic008G099900 Sobic008G099900 Sobic006G085900--Sobic008G099900 Sobic006G085900--Sobic002G084400 Sobic001G436600 Sobic001G436600 Sobic006G085900--Sobic001G436600 Sobic005G210700 Sobic005G210700 Sobic006G085900--Sobic005G210700 Sobic001G149100--Sobic001G347100 Sobic001G149100--Sobic003G299200 Sobic010G252700 Sobic010G252700 Sobic001G149100--Sobic010G252700 Sobic008G179000 Sobic008G179000 Sobic001G149100--Sobic008G179000 Sobic001G149100--Sobic004G241000 Sobic001G149100--Sobic008G163400 Sobic001G149100--Sobic003G239000 Sobic001G149100--Sobic006G069100 Sobic001G149100--Sobic002G267600
Octagon: transcription factors


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