Gene annotation
Transcriptome id Sobic.008G150800.1
Synonym AtRLP45, Sb08g020030, RLP45
Functional annotation Cf-4A protein, putative, expressed
UniProt A0A1B6PDT8
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G53240 : receptor like protein 45
RAP-DB (Rice) LOC_Os04g55440.1 : Cf-4A protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G009900 pantoate--beta-alanine ligase, putative, expressed K01918: pantoate--beta-alanine ligase
2 Sobic.002G004700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
3 Sobic.002G163100 expressed protein -
4 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
5 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
6 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
7 Sobic.003G227300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY11, expressed -
8 Sobic.006G039700 expressed protein -
9 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.005G043000 heat shock protein-related, putative, expressed -
11 Sobic.002G310600 chalcone synthase, putative, expressed K17212: bisdemethoxycurcumin synthase
12 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
13 Sobic.004G273100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@jmjC domain containing protein, expressed -
14 Sobic.001G248500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
15 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
16 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
18 Sobic.002G201600 methyltransferase, putative, expressed -
19 Sobic.010G072000 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.001G335600 RNA-binding protein-like, putative, expressed -


Gene co-expression network
sample Sobic008G150800 Sobic008G150800 Sobic001G009900 Sobic001G009900 Sobic008G150800--Sobic001G009900 Sobic002G004700 Sobic002G004700 Sobic008G150800--Sobic002G004700 Sobic002G163100 Sobic002G163100 Sobic008G150800--Sobic002G163100 Sobic005G213200 Sobic005G213200 Sobic008G150800--Sobic005G213200 Sobic001G100700 Sobic001G100700 Sobic008G150800--Sobic001G100700 Sobic010G071900 Sobic010G071900 Sobic008G150800--Sobic010G071900 Sobic003G227300 Sobic003G227300 Sobic008G150800--Sobic003G227300 Sobic006G039700 Sobic006G039700 Sobic008G150800--Sobic006G039700 Sobic009G106800 Sobic009G106800 Sobic008G150800--Sobic009G106800 Sobic001G009900--Sobic001G100700 Sobic001G009900--Sobic005G213200 Sobic001G444400 Sobic001G444400 Sobic001G009900--Sobic001G444400 Sobic001G009900--Sobic006G039700 Sobic001G009900--Sobic003G227300 Sobic001G009900--Sobic009G106800 Sobic001G009900--Sobic008G150800 Sobic009G120000 Sobic009G120000 Sobic001G009900--Sobic009G120000 Sobic006G199100 Sobic006G199100 Sobic001G009900--Sobic006G199100 Sobic007G067600 Sobic007G067600 Sobic002G004700--Sobic007G067600 Sobic003G426300 Sobic003G426300 Sobic002G004700--Sobic003G426300 Sobic003G164800 Sobic003G164800 Sobic002G004700--Sobic003G164800 Sobic003G430600 Sobic003G430600 Sobic002G004700--Sobic003G430600 Sobic005G101800 Sobic005G101800 Sobic002G004700--Sobic005G101800 Sobic007G066932 Sobic007G066932 Sobic002G004700--Sobic007G066932 Sobic009G072900 Sobic009G072900 Sobic002G004700--Sobic009G072900 Sobic008G030100 Sobic008G030100 Sobic002G004700--Sobic008G030100 Sobic002G018500 Sobic002G018500 Sobic002G004700--Sobic002G018500 Sobic010G072100 Sobic010G072100 Sobic002G163100--Sobic010G072100 Sobic003G437100 Sobic003G437100 Sobic002G163100--Sobic003G437100 Sobic003G426000 Sobic003G426000 Sobic002G163100--Sobic003G426000 Sobic005G156600 Sobic005G156600 Sobic002G163100--Sobic005G156600 Sobic010G102200 Sobic010G102200 Sobic002G163100--Sobic010G102200 Sobic002G163100--Sobic003G426300 Sobic004G304300 Sobic004G304300 Sobic002G163100--Sobic004G304300 Sobic002G163100--Sobic003G430600 Sobic002G310600 Sobic002G310600 Sobic002G163100--Sobic002G310600 Sobic005G213200--Sobic001G100700 Sobic001G243600 Sobic001G243600 Sobic005G213200--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic005G213200--Sobic001G243500 Sobic005G213200--Sobic009G120000 Sobic005G213200--Sobic009G106800 Sobic005G213200--Sobic001G444400 Sobic004G273400 Sobic004G273400 Sobic005G213200--Sobic004G273400 Sobic005G213200--Sobic010G071900 Sobic010G209900 Sobic010G209900 Sobic005G213200--Sobic010G209900 Sobic001G100700--Sobic005G213200 Sobic001G100700--Sobic001G243500 Sobic001G100700--Sobic001G444400 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic001G100700--Sobic009G120000 Sobic001G100700--Sobic004G273400 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic010G071900--Sobic005G213200 Sobic010G185500 Sobic010G185500 Sobic010G071900--Sobic010G185500 Sobic010G071900--Sobic001G100700 Sobic010G071900--Sobic009G120000 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic005G084600 Sobic005G084600 Sobic010G071900--Sobic005G084600 Sobic001G119100 Sobic001G119100 Sobic003G227300--Sobic001G119100 Sobic002G183200 Sobic002G183200 Sobic003G227300--Sobic002G183200 Sobic001G025300 Sobic001G025300 Sobic003G227300--Sobic001G025300 Sobic007G145600 Sobic007G145600 Sobic003G227300--Sobic007G145600 Sobic001G339700 Sobic001G339700 Sobic003G227300--Sobic001G339700 Sobic004G071650 Sobic004G071650 Sobic003G227300--Sobic004G071650 Sobic001G331301 Sobic001G331301 Sobic003G227300--Sobic001G331301 Sobic003G227300--Sobic009G120000 Sobic005G045900 Sobic005G045900 Sobic003G227300--Sobic005G045900 Sobic001G400700 Sobic001G400700 Sobic006G039700--Sobic001G400700 Sobic004G245800 Sobic004G245800 Sobic006G039700--Sobic004G245800 Sobic001G400800 Sobic001G400800 Sobic006G039700--Sobic001G400800 Sobic006G039700--Sobic001G444400 Sobic006G039700--Sobic001G100700 Sobic006G039700--Sobic002G183200 Sobic001G401300 Sobic001G401300 Sobic006G039700--Sobic001G401300 Sobic006G039700--Sobic005G101800 Sobic006G039700--Sobic009G106800 Sobic009G106800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic009G106800--Sobic010G084400 Sobic009G196400 Sobic009G196400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic004G111800 Sobic004G111800 Sobic009G106800--Sobic004G111800 Sobic009G106800--Sobic005G213200 Sobic009G106800--Sobic001G243600 Sobic003G252800 Sobic003G252800 Sobic009G106800--Sobic003G252800 Sobic006G153100 Sobic006G153100 Sobic009G106800--Sobic006G153100
Octagon: transcription factors


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