Gene annotation
Transcriptome id Sobic.008G155900.1
Synonym Sb08g020470
Functional annotation ankyrin-1, putative, expressed
UniProt C5YRD2
Pfam PF00515 PF13414 PF12796
Panther DB PTHR22904 PTHR22904:SF351
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os12g40770.1 : ankyrin-1, putative, expressed
MaizeGDB (Corn) Zm00025a004591
Brachypodium PNT62622 , PNT62623 , PNT62621 , KQJ86511
Barley HORVU5Hr1G026640.4 , HORVU5Hr1G026640.3 , HORVU5Hr1G026640.2
Wheat TraesCS5B02G065700 , TraesCS5A02G098200 , TraesCS5A02G098200 , TraesCS5D02G110200 , TraesCS5B02G103400 , TraesCS5B02G103400 , TraesCS5D02G069900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
3 Sobic.002G248300 polygalacturonase inhibitor 1 precursor, putative, expressed -
4 Sobic.001G128200 RNA recognition motif containing protein, putative, expressed -
5 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
6 Sobic.001G472200 pumilio-family RNA binding repeat containing protein, expressed K17943: pumilio RNA-binding family
7 Sobic.004G102200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
8 Sobic.005G006500 - -
9 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.005G164000 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
11 Sobic.009G153400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
12 Sobic.009G174100 receptor-like protein kinase 2 precursor, putative, expressed -
13 Sobic.007G017100 - -
14 Sobic.004G017500 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.010G231600 cytochrome P450, putative, expressed -
16 Sobic.003G140100 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.001G207600 white-brown complex homolog protein 11, putative, expressed -
18 Sobic.002G129800 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
19 Sobic.004G324500 expressed protein -
20 Sobic.009G146000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic008G155900 Sobic008G155900 Sobic003G298700 Sobic003G298700 Sobic008G155900--Sobic003G298700 Sobic008G008100 Sobic008G008100 Sobic008G155900--Sobic008G008100 Sobic002G248300 Sobic002G248300 Sobic008G155900--Sobic002G248300 Sobic001G128200 Sobic001G128200 Sobic008G155900--Sobic001G128200 Sobic006G005900 Sobic006G005900 Sobic008G155900--Sobic006G005900 Sobic001G472200 Sobic001G472200 Sobic008G155900--Sobic001G472200 Sobic004G102200 Sobic004G102200 Sobic008G155900--Sobic004G102200 Sobic005G006500 Sobic005G006500 Sobic008G155900--Sobic005G006500 Sobic004G274600 Sobic004G274600 Sobic008G155900--Sobic004G274600 Sobic003G298700--Sobic004G102200 Sobic003G298700--Sobic004G274600 Sobic004G211700 Sobic004G211700 Sobic003G298700--Sobic004G211700 Sobic010G014700 Sobic010G014700 Sobic003G298700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G298700--Sobic002G363300 Sobic002G312300 Sobic002G312300 Sobic003G298700--Sobic002G312300 Sobic006G270500 Sobic006G270500 Sobic003G298700--Sobic006G270500 Sobic003G027100 Sobic003G027100 Sobic003G298700--Sobic003G027100 Sobic003G298700--Sobic008G008100 Sobic008G008100--Sobic004G274600 Sobic008G008100--Sobic002G363300 Sobic008G008100--Sobic004G211700 Sobic003G010700 Sobic003G010700 Sobic008G008100--Sobic003G010700 Sobic001G286700 Sobic001G286700 Sobic008G008100--Sobic001G286700 Sobic009G023900 Sobic009G023900 Sobic008G008100--Sobic009G023900 Sobic003G356600 Sobic003G356600 Sobic008G008100--Sobic003G356600 Sobic005G009600 Sobic005G009600 Sobic008G008100--Sobic005G009600 Sobic002G312200 Sobic002G312200 Sobic008G008100--Sobic002G312200 Sobic002G248300--Sobic005G006500 Sobic002G129800 Sobic002G129800 Sobic002G248300--Sobic002G129800 Sobic005G164000 Sobic005G164000 Sobic002G248300--Sobic005G164000 Sobic003G090650 Sobic003G090650 Sobic002G248300--Sobic003G090650 Sobic002G353100 Sobic002G353100 Sobic002G248300--Sobic002G353100 Sobic006G005800 Sobic006G005800 Sobic002G248300--Sobic006G005800 Sobic004G309700 Sobic004G309700 Sobic002G248300--Sobic004G309700 Sobic003G140100 Sobic003G140100 Sobic002G248300--Sobic003G140100 Sobic005G110900 Sobic005G110900 Sobic002G248300--Sobic005G110900 Sobic003G007200 Sobic003G007200 Sobic001G128200--Sobic003G007200 Sobic001G128200--Sobic008G155900 Sobic007G017100 Sobic007G017100 Sobic001G128200--Sobic007G017100 Sobic003G343200 Sobic003G343200 Sobic001G128200--Sobic003G343200 Sobic001G534400 Sobic001G534400 Sobic001G128200--Sobic001G534400 Sobic006G020000 Sobic006G020000 Sobic001G128200--Sobic006G020000 Sobic010G024000 Sobic010G024000 Sobic001G128200--Sobic010G024000 Sobic001G033300 Sobic001G033300 Sobic001G128200--Sobic001G033300 Sobic002G052800 Sobic002G052800 Sobic001G128200--Sobic002G052800 Sobic006G005900--Sobic006G005800 Sobic006G005900--Sobic009G023900 Sobic006G005900--Sobic003G090650 Sobic006G005900--Sobic005G110900 Sobic006G005900--Sobic002G353100 Sobic004G324500 Sobic004G324500 Sobic006G005900--Sobic004G324500 Sobic001G447800 Sobic001G447800 Sobic006G005900--Sobic001G447800 Sobic003G382400 Sobic003G382400 Sobic006G005900--Sobic003G382400 Sobic005G218000 Sobic005G218000 Sobic006G005900--Sobic005G218000 Sobic008G013400 Sobic008G013400 Sobic001G472200--Sobic008G013400 Sobic008G154900 Sobic008G154900 Sobic001G472200--Sobic008G154900 Sobic001G472200--Sobic008G155900 Sobic001G472200--Sobic006G005800 Sobic001G472200--Sobic003G090650 Sobic001G472200--Sobic004G309700 Sobic002G039900 Sobic002G039900 Sobic001G472200--Sobic002G039900 Sobic004G215400 Sobic004G215400 Sobic001G472200--Sobic004G215400 Sobic001G472200--Sobic002G248300 Sobic004G102200--Sobic003G298700 Sobic004G102200--Sobic004G274600 Sobic004G102200--Sobic006G270500 Sobic007G165800 Sobic007G165800 Sobic004G102200--Sobic007G165800 Sobic001G199400 Sobic001G199400 Sobic004G102200--Sobic001G199400 Sobic004G102200--Sobic008G008100 Sobic002G186800 Sobic002G186800 Sobic004G102200--Sobic002G186800 Sobic009G175100 Sobic009G175100 Sobic004G102200--Sobic009G175100 Sobic003G070600 Sobic003G070600 Sobic004G102200--Sobic003G070600 Sobic005G006500--Sobic002G248300 Sobic005G006500--Sobic005G164000 Sobic005G006500--Sobic002G129800 Sobic005G006500--Sobic002G353100 Sobic005G006500--Sobic003G090650 Sobic005G006500--Sobic003G140100 Sobic004G346500 Sobic004G346500 Sobic005G006500--Sobic004G346500 Sobic005G006500--Sobic006G005800 Sobic001G266100 Sobic001G266100 Sobic005G006500--Sobic001G266100 Sobic004G274600--Sobic007G165800 Sobic004G274600--Sobic004G211700 Sobic001G434100 Sobic001G434100 Sobic004G274600--Sobic001G434100 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic008G097700 Sobic008G097700 Sobic004G274600--Sobic008G097700 Sobic004G274600--Sobic008G008100 Sobic004G274600--Sobic003G027100 Sobic004G274600--Sobic003G298700
Octagon: transcription factors


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