Gene annotation
Transcriptome id Sobic.008G174650.5,Sobic.008G174650.2,Sobic.008G174650.6,Sobic.008G174650.1,Sobic.008G174650.8,Sobic.008G174650.3,Sobic.008G174650.7,Sobic.008G174650.4
Synonym -
Functional annotation -
UniProt A0A1Z5R770 , A0A1Z5R7A8 , A0A1Z5R797
Pfam PF02045
Panther DB PTHR12632 PTHR12632:SF9
NCBI CDD -
KEGG Orthology K08064; NFYA, nuclear transcription factor Y, alpha
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G05690 : nuclear factor Y, subunit A2
RAP-DB (Rice) LOC_Os12g42400.1,LOC_Os12g42400.2,LOC_Os12g42400.3 : nuclear transcription factor Y subunit, putative, expressed
MaizeGDB (Corn) Zm00025a004727
Brachypodium KQJ85742
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G171700 U-box domain-containing protein, putative, expressed -
2 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
3 Sobic.001G487500 expressed protein -
4 Sobic.001G190100 serine/threonine-protein kinase receptor precursor, putative, expressed -
5 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
6 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
7 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
8 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
9 Sobic.010G064000 expressed protein -
10 Sobic.003G399700 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.007G147600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
12 Sobic.007G058400 Superior methylation activity against resveratrol compared with that of sbOMT3(PubMedID : 25033820)@O-methyltransferase, putative, expressed -
13 Sobic.007G006300 expressed protein -
14 Sobic.004G097100 F-box family protein, putative, expressed -
15 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
16 Sobic.010G135100 expressed protein -
17 Sobic.001G195200 cytochrome P450, putative, expressed -
18 Sobic.009G189501 - -
19 Sobic.003G427800 Cupin domain containing protein, expressed -
20 Sobic.001G397300 Up-reguralion under heat(PubMedID : 24916767)@expressed protein -


Gene co-expression network
sample Sobic008G174650 Sobic008G174650 Sobic004G171700 Sobic004G171700 Sobic008G174650--Sobic004G171700 Sobic002G234400 Sobic002G234400 Sobic008G174650--Sobic002G234400 Sobic001G487500 Sobic001G487500 Sobic008G174650--Sobic001G487500 Sobic001G190100 Sobic001G190100 Sobic008G174650--Sobic001G190100 Sobic004G229400 Sobic004G229400 Sobic008G174650--Sobic004G229400 Sobic006G187900 Sobic006G187900 Sobic008G174650--Sobic006G187900 Sobic004G229500 Sobic004G229500 Sobic008G174650--Sobic004G229500 Sobic009G183900 Sobic009G183900 Sobic008G174650--Sobic009G183900 Sobic010G064000 Sobic010G064000 Sobic008G174650--Sobic010G064000 Sobic004G171700--Sobic010G064000 Sobic004G171700--Sobic004G229400 Sobic004G171700--Sobic008G174650 Sobic004G171700--Sobic006G187900 Sobic004G171700--Sobic002G234400 Sobic004G097100 Sobic004G097100 Sobic004G171700--Sobic004G097100 Sobic004G171700--Sobic009G183900 Sobic003G144800 Sobic003G144800 Sobic004G171700--Sobic003G144800 Sobic003G427800 Sobic003G427800 Sobic004G171700--Sobic003G427800 Sobic002G234400--Sobic009G183900 Sobic004G108200 Sobic004G108200 Sobic002G234400--Sobic004G108200 Sobic002G250000 Sobic002G250000 Sobic002G234400--Sobic002G250000 Sobic002G234400--Sobic004G229400 Sobic003G148300 Sobic003G148300 Sobic002G234400--Sobic003G148300 Sobic001G195200 Sobic001G195200 Sobic002G234400--Sobic001G195200 Sobic002G234400--Sobic001G487500 Sobic006G198700 Sobic006G198700 Sobic002G234400--Sobic006G198700 Sobic004G086400 Sobic004G086400 Sobic002G234400--Sobic004G086400 Sobic001G487500--Sobic002G234400 Sobic003G060100 Sobic003G060100 Sobic001G487500--Sobic003G060100 Sobic001G487500--Sobic009G183900 Sobic007G006300 Sobic007G006300 Sobic001G487500--Sobic007G006300 Sobic001G487500--Sobic003G148300 Sobic001G487500--Sobic004G108200 Sobic001G487500--Sobic001G195200 Sobic001G487500--Sobic002G250000 Sobic002G327201 Sobic002G327201 Sobic001G487500--Sobic002G327201 Sobic009G189501 Sobic009G189501 Sobic001G190100--Sobic009G189501 Sobic001G190100--Sobic007G006300 Sobic001G397300 Sobic001G397300 Sobic001G190100--Sobic001G397300 Sobic001G105900 Sobic001G105900 Sobic001G190100--Sobic001G105900 Sobic001G190100--Sobic002G234400 Sobic001G391500 Sobic001G391500 Sobic001G190100--Sobic001G391500 Sobic001G190100--Sobic002G250000 Sobic003G260300 Sobic003G260300 Sobic001G190100--Sobic003G260300 Sobic002G339000 Sobic002G339000 Sobic001G190100--Sobic002G339000 Sobic004G229400--Sobic009G183900 Sobic004G229400--Sobic002G234400 Sobic009G205500 Sobic009G205500 Sobic004G229400--Sobic009G205500 Sobic007G058400 Sobic007G058400 Sobic004G229400--Sobic007G058400 Sobic004G229400--Sobic003G427800 Sobic004G229400--Sobic004G229500 Sobic004G229400--Sobic010G064000 Sobic008G158732 Sobic008G158732 Sobic004G229400--Sobic008G158732 Sobic005G013500 Sobic005G013500 Sobic004G229400--Sobic005G013500 Sobic006G187900--Sobic004G097100 Sobic006G187900--Sobic004G229500 Sobic006G187900--Sobic005G013500 Sobic004G246600 Sobic004G246600 Sobic006G187900--Sobic004G246600 Sobic002G269100 Sobic002G269100 Sobic006G187900--Sobic002G269100 Sobic001G035100 Sobic001G035100 Sobic006G187900--Sobic001G035100 Sobic006G187900--Sobic009G183900 Sobic004G295600 Sobic004G295600 Sobic006G187900--Sobic004G295600 Sobic002G184300 Sobic002G184300 Sobic006G187900--Sobic002G184300 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G229500--Sobic004G097100 Sobic004G229500--Sobic003G427800 Sobic009G032000 Sobic009G032000 Sobic004G229500--Sobic009G032000 Sobic004G308900 Sobic004G308900 Sobic004G229500--Sobic004G308900 Sobic004G229500--Sobic009G183900 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic009G183900--Sobic002G234400 Sobic009G183900--Sobic005G013500 Sobic009G183900--Sobic004G229400 Sobic009G144700 Sobic009G144700 Sobic009G183900--Sobic009G144700 Sobic009G183900--Sobic004G108200 Sobic009G183900--Sobic009G205500 Sobic009G183900--Sobic004G097100 Sobic009G183900--Sobic004G229500 Sobic002G388900 Sobic002G388900 Sobic009G183900--Sobic002G388900 Sobic010G064000--Sobic003G427800 Sobic010G064000--Sobic004G229400 Sobic010G064000--Sobic004G171700 Sobic001G471200 Sobic001G471200 Sobic010G064000--Sobic001G471200 Sobic003G228900 Sobic003G228900 Sobic010G064000--Sobic003G228900 Sobic010G064000--Sobic002G234400 Sobic007G017500 Sobic007G017500 Sobic010G064000--Sobic007G017500 Sobic010G064000--Sobic004G097100 Sobic010G064000--Sobic007G058400
Octagon: transcription factors


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