Gene annotation
Transcriptome id Sobic.008G189700.1
Synonym Sb08g023020
Functional annotation nodulin, putative, expressed
UniProt C5YT15
Pfam PF06813
Panther DB PTHR21576 PTHR21576:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39210 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os12g44070.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a045264 , Zm00025a015948 , Zm00025a016051 , Zm00025a024846 , Zm00025a007605 , Zm00025a008596
Brachypodium KQJ86716 , KQK12657 , PNT76871 , KQJ96963 , KQK20512
Barley HORVU3Hr1G086040.3 , HORVU3Hr1G086040.2 , HORVU3Hr1G086040.1 , HORVU3Hr1G086040.7 , HORVU3Hr1G086040.6 , HORVU3Hr1G086040.5 , HORVU3Hr1G086040.4 , HORVU1Hr1G019710.1 , HORVU5Hr1G106960.8 , HORVU5Hr1G106960.5 , HORVU5Hr1G106960.4 , HORVU5Hr1G106960.7 , HORVU5Hr1G106960.6 , HORVU5Hr1G106960.1 , HORVU5Hr1G106960.3 , HORVU5Hr1G106960.2 , HORVU7Hr1G110840.5 , HORVU7Hr1G110840.4 , HORVU7Hr1G110840.3 , HORVU7Hr1G110840.2 , HORVU7Hr1G110840.1 , HORVU5Hr1G000630.5
Wheat TraesCS5A02G003400 , TraesCS5D02G004600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G296100 DUF623 domain containing protein, expressed -
2 Sobic.006G096000 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.003G070500 expressed protein -
4 Sobic.008G169300 remorin family protein, putative, expressed -
5 Sobic.009G243600 GATA zinc finger domain containing protein, expressed -
6 Sobic.004G260600 Fatty acid desaturase 2 (omega-6 fatty acid desaturase) FAD2 (Os)(PubMedID : 27208977)@fatty acid desaturase, putative, expressed K10256: omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase)
7 Sobic.002G123500 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
8 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
9 Sobic.002G361600 ZOS7-10 - C2H2 zinc finger protein, expressed -
10 Sobic.007G204300 exostosin, putative, expressed K02369: alpha-1,4-N-acetylglucosaminyltransferase EXTL2
11 Sobic.003G128700 flavin monooxygenase, putative, expressed -
12 Sobic.005G002700 sorgoleone-producing in root hair(PubmedID : 15361534)@fatty acid desaturase, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
13 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
14 Sobic.003G414800 DUF567 domain containing protein, putative, expressed -
15 Sobic.008G137300 RALFL43 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
16 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
17 Sobic.003G405200 regulatory protein, putative, expressed -
18 Sobic.003G019400 expressed protein -
19 Sobic.002G356500 expressed protein -
20 Sobic.006G132800 expressed protein -


Gene co-expression network
sample Sobic008G189700 Sobic008G189700 Sobic003G296100 Sobic003G296100 Sobic008G189700--Sobic003G296100 Sobic006G096000 Sobic006G096000 Sobic008G189700--Sobic006G096000 Sobic003G070500 Sobic003G070500 Sobic008G189700--Sobic003G070500 Sobic008G169300 Sobic008G169300 Sobic008G189700--Sobic008G169300 Sobic009G243600 Sobic009G243600 Sobic008G189700--Sobic009G243600 Sobic004G260600 Sobic004G260600 Sobic008G189700--Sobic004G260600 Sobic002G123500 Sobic002G123500 Sobic008G189700--Sobic002G123500 Sobic003G300900 Sobic003G300900 Sobic008G189700--Sobic003G300900 Sobic002G361600 Sobic002G361600 Sobic008G189700--Sobic002G361600 Sobic001G385900 Sobic001G385900 Sobic003G296100--Sobic001G385900 Sobic008G170500 Sobic008G170500 Sobic003G296100--Sobic008G170500 Sobic010G134900 Sobic010G134900 Sobic003G296100--Sobic010G134900 Sobic003G296100--Sobic003G300900 Sobic003G296100--Sobic008G189700 Sobic002G374650 Sobic002G374650 Sobic003G296100--Sobic002G374650 Sobic003G128900 Sobic003G128900 Sobic003G296100--Sobic003G128900 Sobic003G296100--Sobic008G169300 Sobic003G128700 Sobic003G128700 Sobic003G296100--Sobic003G128700 Sobic003G426600 Sobic003G426600 Sobic006G096000--Sobic003G426600 Sobic006G234466 Sobic006G234466 Sobic006G096000--Sobic006G234466 Sobic009G171500 Sobic009G171500 Sobic006G096000--Sobic009G171500 Sobic008G022000 Sobic008G022000 Sobic006G096000--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic006G096000--Sobic002G012300 Sobic010G045500 Sobic010G045500 Sobic006G096000--Sobic010G045500 Sobic002G012500 Sobic002G012500 Sobic006G096000--Sobic002G012500 Sobic010G196000 Sobic010G196000 Sobic006G096000--Sobic010G196000 Sobic008G127933 Sobic008G127933 Sobic006G096000--Sobic008G127933 Sobic003G070500--Sobic002G123500 Sobic006G227500 Sobic006G227500 Sobic003G070500--Sobic006G227500 Sobic009G221500 Sobic009G221500 Sobic003G070500--Sobic009G221500 Sobic001G430100 Sobic001G430100 Sobic003G070500--Sobic001G430100 Sobic001G062500 Sobic001G062500 Sobic003G070500--Sobic001G062500 Sobic007G050200 Sobic007G050200 Sobic003G070500--Sobic007G050200 Sobic004G323300 Sobic004G323300 Sobic003G070500--Sobic004G323300 Sobic004G209400 Sobic004G209400 Sobic003G070500--Sobic004G209400 Sobic007G090469 Sobic007G090469 Sobic003G070500--Sobic007G090469 Sobic010G199500 Sobic010G199500 Sobic008G169300--Sobic010G199500 Sobic003G324600 Sobic003G324600 Sobic008G169300--Sobic003G324600 Sobic009G058600 Sobic009G058600 Sobic008G169300--Sobic009G058600 Sobic003G419300 Sobic003G419300 Sobic008G169300--Sobic003G419300 Sobic003G019400 Sobic003G019400 Sobic008G169300--Sobic003G019400 Sobic004G112200 Sobic004G112200 Sobic008G169300--Sobic004G112200 Sobic002G250300 Sobic002G250300 Sobic008G169300--Sobic002G250300 Sobic004G214300 Sobic004G214300 Sobic008G169300--Sobic004G214300 Sobic002G239700 Sobic002G239700 Sobic008G169300--Sobic002G239700 Sobic009G243600--Sobic010G199500 Sobic009G243600--Sobic002G250300 Sobic009G243600--Sobic009G058600 Sobic009G243600--Sobic003G419300 Sobic009G243600--Sobic008G169300 Sobic009G243600--Sobic003G070500 Sobic009G243600--Sobic003G019400 Sobic004G029450 Sobic004G029450 Sobic009G243600--Sobic004G029450 Sobic007G059400 Sobic007G059400 Sobic009G243600--Sobic007G059400 Sobic002G044600 Sobic002G044600 Sobic004G260600--Sobic002G044600 Sobic004G260600--Sobic006G096000 Sobic008G036800 Sobic008G036800 Sobic004G260600--Sobic008G036800 Sobic004G260600--Sobic002G012300 Sobic008G158600 Sobic008G158600 Sobic004G260600--Sobic008G158600 Sobic008G158501 Sobic008G158501 Sobic004G260600--Sobic008G158501 Sobic004G260600--Sobic003G426600 Sobic004G292600 Sobic004G292600 Sobic004G260600--Sobic004G292600 Sobic004G165100 Sobic004G165100 Sobic004G260600--Sobic004G165100 Sobic002G123500--Sobic001G430100 Sobic003G405300 Sobic003G405300 Sobic002G123500--Sobic003G405300 Sobic003G311800 Sobic003G311800 Sobic002G123500--Sobic003G311800 Sobic003G399700 Sobic003G399700 Sobic002G123500--Sobic003G399700 Sobic002G123500--Sobic003G070500 Sobic006G157900 Sobic006G157900 Sobic002G123500--Sobic006G157900 Sobic006G274933 Sobic006G274933 Sobic002G123500--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic002G123500--Sobic002G183700 Sobic006G235200 Sobic006G235200 Sobic002G123500--Sobic006G235200 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic010G090100 Sobic010G090100 Sobic003G300900--Sobic010G090100 Sobic004G349237 Sobic004G349237 Sobic002G361600--Sobic004G349237 Sobic003G265150 Sobic003G265150 Sobic002G361600--Sobic003G265150 Sobic002G421501 Sobic002G421501 Sobic002G361600--Sobic002G421501 Sobic003G414900 Sobic003G414900 Sobic002G361600--Sobic003G414900 Sobic001G097800 Sobic001G097800 Sobic002G361600--Sobic001G097800 Sobic004G034100 Sobic004G034100 Sobic002G361600--Sobic004G034100 Sobic002G311300 Sobic002G311300 Sobic002G361600--Sobic002G311300 Sobic002G242100 Sobic002G242100 Sobic002G361600--Sobic002G242100 Sobic006G130700 Sobic006G130700 Sobic002G361600--Sobic006G130700
Octagon: transcription factors


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