Gene annotation
Transcriptome id Sobic.003G405200.1
Synonym Sb03g044060
Functional annotation regulatory protein, putative, expressed
UniProt A0A1W0W150
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF759
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os01g69200.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a039294 , Zm00025a026259
Brachypodium KQK11244 , KQK11243 , KQK11254
Barley HORVU1Hr1G092200.3 , HORVU1Hr1G092200.4 , HORVU1Hr1G092200.5 , HORVU1Hr1G092200.2 , HORVU3Hr1G094250.8 , HORVU1Hr1G092200.1 , HORVU3Hr1G094250.5 , HORVU3Hr1G094250.4 , HORVU3Hr1G094250.6 , HORVU3Hr1G094250.1 , HORVU3Hr1G094250.3 , HORVU3Hr1G094250.2 , HORVU3Hr1G094320.5 , HORVU3Hr1G094320.4 , HORVU3Hr1G094320.7 , HORVU3Hr1G094320.6 , HORVU3Hr1G094320.1 , HORVU3Hr1G094320.3 , HORVU3Hr1G094320.2
Wheat TraesCS3B02G466300 , TraesCS3D02G424300 , TraesCS1D02G328100 , TraesCS3A02G428700 , TraesCS5D02G536200 , TraesCS3B02G465400 , TraesCS3A02G428200 , TraesCS3B02G465900 , TraesCS3D02G423600 , TraesCS3A02G427400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
2 Sobic.006G050800 expressed protein -
3 Sobic.004G301600 integral membrane protein, putative, expressed -
4 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.004G180700 expressed protein -
6 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
7 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
8 Sobic.010G196000 DNA binding protein, putative, expressed -
9 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
10 Sobic.009G109000 expressed protein -
11 Sobic.003G136200 Cupin domain containing protein, expressed -
12 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.005G067500 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
14 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.001G242100 expressed protein -
16 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
17 Sobic.002G105300 SCP-like extracellular protein, expressed -
18 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
19 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
20 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G405200 Sobic003G405200 Sobic006G202600 Sobic006G202600 Sobic003G405200--Sobic006G202600 Sobic006G050800 Sobic006G050800 Sobic003G405200--Sobic006G050800 Sobic004G301600 Sobic004G301600 Sobic003G405200--Sobic004G301600 Sobic002G301900 Sobic002G301900 Sobic003G405200--Sobic002G301900 Sobic004G180700 Sobic004G180700 Sobic003G405200--Sobic004G180700 Sobic010G045500 Sobic010G045500 Sobic003G405200--Sobic010G045500 Sobic006G170600 Sobic006G170600 Sobic003G405200--Sobic006G170600 Sobic010G196000 Sobic010G196000 Sobic003G405200--Sobic010G196000 Sobic005G163800 Sobic005G163800 Sobic003G405200--Sobic005G163800 Sobic006G202600--Sobic004G180700 Sobic006G202600--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic006G202600--Sobic004G295100 Sobic006G202600--Sobic006G170600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G202600--Sobic006G050800 Sobic001G508532 Sobic001G508532 Sobic006G202600--Sobic001G508532 Sobic007G090469 Sobic007G090469 Sobic006G202600--Sobic007G090469 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic001G330300 Sobic001G330300 Sobic006G050800--Sobic001G330300 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic004G301600--Sobic004G180700 Sobic004G301600--Sobic006G170600 Sobic004G301600--Sobic006G202600 Sobic004G301600--Sobic006G050800 Sobic004G301600--Sobic002G301900 Sobic002G105300 Sobic002G105300 Sobic004G301600--Sobic002G105300 Sobic004G301600--Sobic007G090469 Sobic004G301600--Sobic010G196000 Sobic004G301600--Sobic004G295100 Sobic001G242100 Sobic001G242100 Sobic002G301900--Sobic001G242100 Sobic002G301900--Sobic010G045500 Sobic001G502000 Sobic001G502000 Sobic002G301900--Sobic001G502000 Sobic002G301900--Sobic006G170600 Sobic003G400900 Sobic003G400900 Sobic002G301900--Sobic003G400900 Sobic005G222500 Sobic005G222500 Sobic002G301900--Sobic005G222500 Sobic004G299600 Sobic004G299600 Sobic002G301900--Sobic004G299600 Sobic002G183700 Sobic002G183700 Sobic002G301900--Sobic002G183700 Sobic002G301900--Sobic004G180700 Sobic004G180700--Sobic004G301600 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic004G180700--Sobic010G196000 Sobic004G180700--Sobic004G295100 Sobic004G180700--Sobic002G301900 Sobic004G180700--Sobic005G163800 Sobic010G045500--Sobic001G242100 Sobic010G045500--Sobic002G301900 Sobic006G234466 Sobic006G234466 Sobic010G045500--Sobic006G234466 Sobic010G045500--Sobic004G180700 Sobic005G215400 Sobic005G215400 Sobic010G045500--Sobic005G215400 Sobic004G322800 Sobic004G322800 Sobic010G045500--Sobic004G322800 Sobic010G270700 Sobic010G270700 Sobic010G045500--Sobic010G270700 Sobic010G045500--Sobic004G301600 Sobic008G128200 Sobic008G128200 Sobic010G045500--Sobic008G128200 Sobic006G150100 Sobic006G150100 Sobic006G170600--Sobic006G150100 Sobic002G003700 Sobic002G003700 Sobic006G170600--Sobic002G003700 Sobic006G170600--Sobic006G202600 Sobic006G170600--Sobic004G301600 Sobic006G170600--Sobic004G180700 Sobic006G225500 Sobic006G225500 Sobic006G170600--Sobic006G225500 Sobic006G170600--Sobic003G400900 Sobic002G329200 Sobic002G329200 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic010G196000--Sobic004G295100 Sobic010G196000--Sobic006G202600 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic010G196000--Sobic002G105300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic005G067500 Sobic005G067500 Sobic010G196000--Sobic005G067500 Sobic002G412600 Sobic002G412600 Sobic005G163800--Sobic002G412600 Sobic005G163800--Sobic004G180700 Sobic001G293000 Sobic001G293000 Sobic005G163800--Sobic001G293000 Sobic002G090900 Sobic002G090900 Sobic005G163800--Sobic002G090900 Sobic005G163800--Sobic006G202600 Sobic005G163800--Sobic004G301600 Sobic005G163800--Sobic006G170600 Sobic010G146300 Sobic010G146300 Sobic005G163800--Sobic010G146300 Sobic002G122400 Sobic002G122400 Sobic005G163800--Sobic002G122400
Octagon: transcription factors


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