Gene annotation
Transcriptome id Sobic.003G296100.1
Synonym ATOFP2, Sb03g034650, OFP2
Functional annotation DUF623 domain containing protein, expressed
UniProt C5XK42
Pfam PF04844
Panther DB PTHR33057 PTHR33057:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30400 : ovate family protein 2
RAP-DB (Rice) LOC_Os01g54570.1 : DUF623 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027585 , Zm00025a044236
Brachypodium PNT70917 , KQK09737
Barley HORVU1Hr1G076490.1 , HORVU3Hr1G071640.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G385900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@stress responsive protein, putative, expressed -
2 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.010G134900 DNA binding protein, putative, expressed -
4 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
5 Sobic.008G189700 nodulin, putative, expressed -
6 Sobic.002G374650 -(PubMedID : 26976818) K11517: (S)-2-hydroxy-acid oxidase
7 Sobic.003G128900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.008G169300 remorin family protein, putative, expressed -
9 Sobic.003G128700 flavin monooxygenase, putative, expressed -
10 Sobic.004G263700 expressed protein -
11 Sobic.010G190300 lipid phosphatase protein, putative, expressed -
12 Sobic.003G419300 xylanase inhibitor, putative, expressed -
13 Sobic.010G155100 NAC domain containing protein, putative, expressed -
14 Sobic.001G078700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
15 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
16 Sobic.002G091000 - -
17 Sobic.003G019400 expressed protein -
18 Sobic.006G031400 expressed protein -
19 Sobic.002G379000 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
20 Sobic.001G396700 glycosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G296100 Sobic003G296100 Sobic001G385900 Sobic001G385900 Sobic003G296100--Sobic001G385900 Sobic008G170500 Sobic008G170500 Sobic003G296100--Sobic008G170500 Sobic010G134900 Sobic010G134900 Sobic003G296100--Sobic010G134900 Sobic003G300900 Sobic003G300900 Sobic003G296100--Sobic003G300900 Sobic008G189700 Sobic008G189700 Sobic003G296100--Sobic008G189700 Sobic002G374650 Sobic002G374650 Sobic003G296100--Sobic002G374650 Sobic003G128900 Sobic003G128900 Sobic003G296100--Sobic003G128900 Sobic008G169300 Sobic008G169300 Sobic003G296100--Sobic008G169300 Sobic003G128700 Sobic003G128700 Sobic003G296100--Sobic003G128700 Sobic001G205800 Sobic001G205800 Sobic001G385900--Sobic001G205800 Sobic001G385900--Sobic008G170500 Sobic010G164400 Sobic010G164400 Sobic001G385900--Sobic010G164400 Sobic001G385900--Sobic002G374650 Sobic010G221800 Sobic010G221800 Sobic001G385900--Sobic010G221800 Sobic004G108100 Sobic004G108100 Sobic001G385900--Sobic004G108100 Sobic001G385900--Sobic003G300900 Sobic002G389100 Sobic002G389100 Sobic001G385900--Sobic002G389100 Sobic002G416500 Sobic002G416500 Sobic001G385900--Sobic002G416500 Sobic008G170500--Sobic003G300900 Sobic006G245500 Sobic006G245500 Sobic008G170500--Sobic006G245500 Sobic008G135500 Sobic008G135500 Sobic008G170500--Sobic008G135500 Sobic008G170500--Sobic001G205800 Sobic010G090100 Sobic010G090100 Sobic008G170500--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic008G170500--Sobic001G197800 Sobic008G170500--Sobic003G128700 Sobic008G170500--Sobic001G385900 Sobic003G019400 Sobic003G019400 Sobic008G170500--Sobic003G019400 Sobic001G261400 Sobic001G261400 Sobic010G134900--Sobic001G261400 Sobic004G214300 Sobic004G214300 Sobic010G134900--Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic010G134900--Sobic009G102400 Sobic006G124200 Sobic006G124200 Sobic010G134900--Sobic006G124200 Sobic003G419300 Sobic003G419300 Sobic010G134900--Sobic003G419300 Sobic010G155100 Sobic010G155100 Sobic010G134900--Sobic010G155100 Sobic002G239700 Sobic002G239700 Sobic010G134900--Sobic002G239700 Sobic004G112200 Sobic004G112200 Sobic010G134900--Sobic004G112200 Sobic003G419400 Sobic003G419400 Sobic010G134900--Sobic003G419400 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic003G300900--Sobic008G135500 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic003G300900--Sobic006G245500 Sobic003G300900--Sobic010G090100 Sobic008G189700--Sobic003G296100 Sobic006G096000 Sobic006G096000 Sobic008G189700--Sobic006G096000 Sobic003G070500 Sobic003G070500 Sobic008G189700--Sobic003G070500 Sobic008G189700--Sobic008G169300 Sobic009G243600 Sobic009G243600 Sobic008G189700--Sobic009G243600 Sobic004G260600 Sobic004G260600 Sobic008G189700--Sobic004G260600 Sobic002G123500 Sobic002G123500 Sobic008G189700--Sobic002G123500 Sobic008G189700--Sobic003G300900 Sobic002G361600 Sobic002G361600 Sobic008G189700--Sobic002G361600 Sobic008G034700 Sobic008G034700 Sobic002G374650--Sobic008G034700 Sobic002G374650--Sobic004G112200 Sobic001G026300 Sobic001G026300 Sobic002G374650--Sobic001G026300 Sobic005G041300 Sobic005G041300 Sobic002G374650--Sobic005G041300 Sobic006G183900 Sobic006G183900 Sobic002G374650--Sobic006G183900 Sobic003G324600 Sobic003G324600 Sobic002G374650--Sobic003G324600 Sobic006G205500 Sobic006G205500 Sobic002G374650--Sobic006G205500 Sobic002G374650--Sobic010G155100 Sobic010G170300 Sobic010G170300 Sobic002G374650--Sobic010G170300 Sobic003G052900 Sobic003G052900 Sobic003G128900--Sobic003G052900 Sobic003G128900--Sobic002G374650 Sobic001G295800 Sobic001G295800 Sobic003G128900--Sobic001G295800 Sobic008G099100 Sobic008G099100 Sobic003G128900--Sobic008G099100 Sobic007G165400 Sobic007G165400 Sobic003G128900--Sobic007G165400 Sobic008G027700 Sobic008G027700 Sobic003G128900--Sobic008G027700 Sobic001G476300 Sobic001G476300 Sobic003G128900--Sobic001G476300 Sobic003G128900--Sobic008G034700 Sobic010G131400 Sobic010G131400 Sobic003G128900--Sobic010G131400 Sobic010G199500 Sobic010G199500 Sobic008G169300--Sobic010G199500 Sobic008G169300--Sobic003G324600 Sobic009G058600 Sobic009G058600 Sobic008G169300--Sobic009G058600 Sobic008G169300--Sobic003G419300 Sobic008G169300--Sobic003G019400 Sobic008G169300--Sobic004G112200 Sobic002G250300 Sobic002G250300 Sobic008G169300--Sobic002G250300 Sobic008G169300--Sobic004G214300 Sobic008G169300--Sobic002G239700 Sobic003G128700--Sobic003G300900 Sobic003G128700--Sobic006G245500 Sobic003G128700--Sobic008G170500 Sobic003G386800 Sobic003G386800 Sobic003G128700--Sobic003G386800 Sobic001G397100 Sobic001G397100 Sobic003G128700--Sobic001G397100 Sobic003G128700--Sobic008G135500 Sobic003G128700--Sobic010G090100 Sobic002G242300 Sobic002G242300 Sobic003G128700--Sobic002G242300 Sobic008G034300 Sobic008G034300 Sobic003G128700--Sobic008G034300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.