Gene annotation
Transcriptome id Sobic.009G057200.2,Sobic.009G057200.1
Synonym ATG6, ATSCX, ACX4
Functional annotation acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed
UniProt A0A1B6P6Z1 , A0A1Z5R247
Pfam PF02770 PF02771 PF00441 PF02771 PF02770 PF00441
Panther DB PTHR10909 PTHR10909:SF331
NCBI CDD -
KEGG Orthology K00232; E1.3.3.6, ACOX1, acyl-CoA oxidase
Gene Ontology GO:0016627; oxidoreductase activity, acting on the CH-CH group of donors GO:0008152metabolic process GO:0003995acyl-CoA dehydrogenase activity GO:0003995acyl-CoA dehydrogenase activity GO:0016627oxidoreductase activity, acting on the CH-CH group of donors GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G51840 : acyl-CoA oxidase 4
RAP-DB (Rice) LOC_Os05g07090.1 : acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK07329 , KQK07494
Barley HORVU1Hr1G024240.13 , HORVU1Hr1G024240.12 , HORVU1Hr1G024240.11 , HORVU1Hr1G024240.10 , HORVU1Hr1G024240.9 , HORVU1Hr1G024240.8 , HORVU1Hr1G024240.7 , HORVU1Hr1G024240.6 , HORVU1Hr1G024240.5 , HORVU1Hr1G024240.4 , HORVU1Hr1G024240.3 , HORVU1Hr1G024240.2 , HORVU1Hr1G024240.1
Wheat TraesCS1D02G111900 , TraesCS1A02G110300 , TraesCS1B02G129300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
2 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
3 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
4 Sobic.001G013100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
5 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
6 Sobic.003G217500 expressed protein -
7 Sobic.002G317600 endoribonuclease, putative, expressed -
8 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
9 Sobic.001G465500 radical SAM enzyme, putative, expressed -
10 Sobic.010G141600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K00122: formate dehydrogenase
11 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
13 Sobic.003G274400 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
14 Sobic.006G200901 - -
15 Sobic.001G456800 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
16 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
17 Sobic.003G161800 exportin 1, putative, expressed K14289: exportin-5
18 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
19 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
20 Sobic.001G540700 expressed protein -


Gene co-expression network
sample Sobic009G057200 Sobic009G057200 Sobic001G115500 Sobic001G115500 Sobic009G057200--Sobic001G115500 Sobic001G436300 Sobic001G436300 Sobic009G057200--Sobic001G436300 Sobic003G298900 Sobic003G298900 Sobic009G057200--Sobic003G298900 Sobic001G013100 Sobic001G013100 Sobic009G057200--Sobic001G013100 Sobic004G015300 Sobic004G015300 Sobic009G057200--Sobic004G015300 Sobic003G217500 Sobic003G217500 Sobic009G057200--Sobic003G217500 Sobic002G317600 Sobic002G317600 Sobic009G057200--Sobic002G317600 Sobic001G123100 Sobic001G123100 Sobic009G057200--Sobic001G123100 Sobic001G465500 Sobic001G465500 Sobic009G057200--Sobic001G465500 Sobic008G125000 Sobic008G125000 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic002G264300 Sobic002G264300 Sobic001G115500--Sobic002G264300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000 Sobic006G127500 Sobic006G127500 Sobic001G436300--Sobic006G127500 Sobic001G235700 Sobic001G235700 Sobic001G436300--Sobic001G235700 Sobic001G436300--Sobic001G115500 Sobic003G274400 Sobic003G274400 Sobic001G436300--Sobic003G274400 Sobic001G436300--Sobic001G008500 Sobic006G245700 Sobic006G245700 Sobic001G436300--Sobic006G245700 Sobic004G343600 Sobic004G343600 Sobic001G436300--Sobic004G343600 Sobic001G436300--Sobic002G317600 Sobic001G097400 Sobic001G097400 Sobic001G436300--Sobic001G097400 Sobic002G006100 Sobic002G006100 Sobic003G298900--Sobic002G006100 Sobic001G540700 Sobic001G540700 Sobic003G298900--Sobic001G540700 Sobic003G298900--Sobic001G123100 Sobic009G254000 Sobic009G254000 Sobic003G298900--Sobic009G254000 Sobic009G005700 Sobic009G005700 Sobic003G298900--Sobic009G005700 Sobic005G064100 Sobic005G064100 Sobic003G298900--Sobic005G064100 Sobic002G253900 Sobic002G253900 Sobic003G298900--Sobic002G253900 Sobic003G411700 Sobic003G411700 Sobic003G298900--Sobic003G411700 Sobic007G197100 Sobic007G197100 Sobic003G298900--Sobic007G197100 Sobic001G013100--Sobic009G057200 Sobic001G013100--Sobic001G436300 Sobic006G258000 Sobic006G258000 Sobic001G013100--Sobic006G258000 Sobic001G013100--Sobic001G115500 Sobic001G469200 Sobic001G469200 Sobic001G013100--Sobic001G469200 Sobic001G013100--Sobic002G317600 Sobic005G164500 Sobic005G164500 Sobic001G013100--Sobic005G164500 Sobic006G032600 Sobic006G032600 Sobic001G013100--Sobic006G032600 Sobic001G013100--Sobic006G245700 Sobic001G296800 Sobic001G296800 Sobic004G015300--Sobic001G296800 Sobic006G122200 Sobic006G122200 Sobic004G015300--Sobic006G122200 Sobic009G212100 Sobic009G212100 Sobic004G015300--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic004G015300--Sobic004G315700 Sobic005G047000 Sobic005G047000 Sobic004G015300--Sobic005G047000 Sobic001G487200 Sobic001G487200 Sobic004G015300--Sobic001G487200 Sobic004G015300--Sobic006G245700 Sobic007G084200 Sobic007G084200 Sobic004G015300--Sobic007G084200 Sobic004G015300--Sobic001G115500 Sobic004G250600 Sobic004G250600 Sobic003G217500--Sobic004G250600 Sobic006G200901 Sobic006G200901 Sobic003G217500--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic003G217500--Sobic004G014100 Sobic002G343000 Sobic002G343000 Sobic003G217500--Sobic002G343000 Sobic009G148000 Sobic009G148000 Sobic003G217500--Sobic009G148000 Sobic006G140300 Sobic006G140300 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G304500 Sobic003G304500 Sobic003G217500--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic003G217500--Sobic006G186300 Sobic002G317600--Sobic001G436300 Sobic008G075200 Sobic008G075200 Sobic002G317600--Sobic008G075200 Sobic008G059900 Sobic008G059900 Sobic002G317600--Sobic008G059900 Sobic007G079600 Sobic007G079600 Sobic002G317600--Sobic007G079600 Sobic007G172600 Sobic007G172600 Sobic002G317600--Sobic007G172600 Sobic003G248300 Sobic003G248300 Sobic002G317600--Sobic003G248300 Sobic002G317600--Sobic001G235700 Sobic008G181400 Sobic008G181400 Sobic002G317600--Sobic008G181400 Sobic001G176900 Sobic001G176900 Sobic002G317600--Sobic001G176900 Sobic002G284100 Sobic002G284100 Sobic001G123100--Sobic002G284100 Sobic001G123100--Sobic002G253900 Sobic001G369800 Sobic001G369800 Sobic001G123100--Sobic001G369800 Sobic005G143100 Sobic005G143100 Sobic001G123100--Sobic005G143100 Sobic004G145300 Sobic004G145300 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G123100--Sobic001G540700 Sobic001G123100--Sobic002G006100 Sobic003G224700 Sobic003G224700 Sobic001G123100--Sobic003G224700 Sobic008G078000 Sobic008G078000 Sobic001G465500--Sobic008G078000 Sobic002G335500 Sobic002G335500 Sobic001G465500--Sobic002G335500 Sobic004G078500 Sobic004G078500 Sobic001G465500--Sobic004G078500 Sobic003G028400 Sobic003G028400 Sobic001G465500--Sobic003G028400 Sobic001G465500--Sobic002G208400 Sobic004G030400 Sobic004G030400 Sobic001G465500--Sobic004G030400 Sobic003G331000 Sobic003G331000 Sobic001G465500--Sobic003G331000 Sobic003G129300 Sobic003G129300 Sobic001G465500--Sobic003G129300 Sobic001G465500--Sobic001G436300
Octagon: transcription factors


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