Gene annotation
Transcriptome id Sobic.009G103400.1,Sobic.009G103400.2
Synonym
Functional annotation -
UniProt A0A1B6P7V5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G239900 amino acid permease, putative, expressed -
2 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
3 Sobic.008G017700 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
4 Sobic.007G192500 nodulin, putative, expressed -
5 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
6 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
7 Sobic.004G032900 wee1-like protein kinase, putative, expressed K06632: wee1-like protein kinase
8 Sobic.009G219700 - -
9 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
10 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
11 Sobic.009G081800 helicase, putative, expressed K11273: DDX11, CHL1, chromosome transmission fidelity protein 1
12 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
13 Sobic.006G124200 expressed protein -
14 Sobic.002G158500 ankyrin, putative, expressed -
15 Sobic.003G019400 expressed protein -
16 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.010G155100 NAC domain containing protein, putative, expressed -
18 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
19 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
20 Sobic.001G500400 kinesin motor domain containing protein, expressed -


Gene co-expression network
sample Sobic009G103400 Sobic009G103400 Sobic001G239900 Sobic001G239900 Sobic009G103400--Sobic001G239900 Sobic009G244900 Sobic009G244900 Sobic009G103400--Sobic009G244900 Sobic008G017700 Sobic008G017700 Sobic009G103400--Sobic008G017700 Sobic007G192500 Sobic007G192500 Sobic009G103400--Sobic007G192500 Sobic002G186900 Sobic002G186900 Sobic009G103400--Sobic002G186900 Sobic001G392200 Sobic001G392200 Sobic009G103400--Sobic001G392200 Sobic004G032900 Sobic004G032900 Sobic009G103400--Sobic004G032900 Sobic009G219700 Sobic009G219700 Sobic009G103400--Sobic009G219700 Sobic001G261400 Sobic001G261400 Sobic009G103400--Sobic001G261400 Sobic001G239900--Sobic007G192500 Sobic009G081800 Sobic009G081800 Sobic001G239900--Sobic009G081800 Sobic006G126800 Sobic006G126800 Sobic001G239900--Sobic006G126800 Sobic003G022000 Sobic003G022000 Sobic001G239900--Sobic003G022000 Sobic001G239900--Sobic009G103400 Sobic002G201700 Sobic002G201700 Sobic001G239900--Sobic002G201700 Sobic001G239900--Sobic009G244900 Sobic002G310300 Sobic002G310300 Sobic001G239900--Sobic002G310300 Sobic002G167100 Sobic002G167100 Sobic001G239900--Sobic002G167100 Sobic009G244900--Sobic007G192500 Sobic009G244900--Sobic002G201700 Sobic004G261800 Sobic004G261800 Sobic009G244900--Sobic004G261800 Sobic010G101600 Sobic010G101600 Sobic009G244900--Sobic010G101600 Sobic009G244900--Sobic002G167100 Sobic002G153000 Sobic002G153000 Sobic009G244900--Sobic002G153000 Sobic001G135200 Sobic001G135200 Sobic009G244900--Sobic001G135200 Sobic010G250300 Sobic010G250300 Sobic009G244900--Sobic010G250300 Sobic004G069400 Sobic004G069400 Sobic009G244900--Sobic004G069400 Sobic008G118300 Sobic008G118300 Sobic008G017700--Sobic008G118300 Sobic007G112100 Sobic007G112100 Sobic008G017700--Sobic007G112100 Sobic008G017700--Sobic009G244900 Sobic008G017700--Sobic007G192500 Sobic008G017700--Sobic009G103400 Sobic003G418400 Sobic003G418400 Sobic008G017700--Sobic003G418400 Sobic005G210500 Sobic005G210500 Sobic008G017700--Sobic005G210500 Sobic008G141900 Sobic008G141900 Sobic008G017700--Sobic008G141900 Sobic008G046000 Sobic008G046000 Sobic008G017700--Sobic008G046000 Sobic007G192500--Sobic002G201700 Sobic007G192500--Sobic002G167100 Sobic002G309100 Sobic002G309100 Sobic007G192500--Sobic002G309100 Sobic007G192500--Sobic009G244900 Sobic007G192500--Sobic003G022000 Sobic010G062900 Sobic010G062900 Sobic007G192500--Sobic010G062900 Sobic009G025700 Sobic009G025700 Sobic007G192500--Sobic009G025700 Sobic001G499500 Sobic001G499500 Sobic007G192500--Sobic001G499500 Sobic007G192500--Sobic001G239900 Sobic009G059500 Sobic009G059500 Sobic002G186900--Sobic009G059500 Sobic002G271300 Sobic002G271300 Sobic002G186900--Sobic002G271300 Sobic003G096000 Sobic003G096000 Sobic002G186900--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic002G186900--Sobic010G089500 Sobic002G186900--Sobic010G101600 Sobic004G056400 Sobic004G056400 Sobic002G186900--Sobic004G056400 Sobic001G228200 Sobic001G228200 Sobic002G186900--Sobic001G228200 Sobic006G200000 Sobic006G200000 Sobic002G186900--Sobic006G200000 Sobic007G044400 Sobic007G044400 Sobic002G186900--Sobic007G044400 Sobic002G070300 Sobic002G070300 Sobic001G392200--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G392200--Sobic009G041800 Sobic002G232400 Sobic002G232400 Sobic001G392200--Sobic002G232400 Sobic001G011000 Sobic001G011000 Sobic001G392200--Sobic001G011000 Sobic001G392200--Sobic002G153000 Sobic001G392200--Sobic010G101600 Sobic002G101300 Sobic002G101300 Sobic001G392200--Sobic002G101300 Sobic004G218600 Sobic004G218600 Sobic001G392200--Sobic004G218600 Sobic001G392200--Sobic002G186900 Sobic004G032900--Sobic007G112100 Sobic007G125300 Sobic007G125300 Sobic004G032900--Sobic007G125300 Sobic006G119300 Sobic006G119300 Sobic004G032900--Sobic006G119300 Sobic002G236700 Sobic002G236700 Sobic004G032900--Sobic002G236700 Sobic009G109300 Sobic009G109300 Sobic004G032900--Sobic009G109300 Sobic002G246900 Sobic002G246900 Sobic004G032900--Sobic002G246900 Sobic010G051100 Sobic010G051100 Sobic004G032900--Sobic010G051100 Sobic006G120600 Sobic006G120600 Sobic004G032900--Sobic006G120600 Sobic010G103700 Sobic010G103700 Sobic004G032900--Sobic010G103700 Sobic009G219700--Sobic010G250300 Sobic007G127500 Sobic007G127500 Sobic009G219700--Sobic007G127500 Sobic004G251600 Sobic004G251600 Sobic009G219700--Sobic004G251600 Sobic008G023300 Sobic008G023300 Sobic009G219700--Sobic008G023300 Sobic009G219700--Sobic009G244900 Sobic009G219700--Sobic009G103400 Sobic004G094000 Sobic004G094000 Sobic009G219700--Sobic004G094000 Sobic009G219700--Sobic007G192500 Sobic009G219700--Sobic002G201700 Sobic010G134900 Sobic010G134900 Sobic001G261400--Sobic010G134900 Sobic004G214300 Sobic004G214300 Sobic001G261400--Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic001G261400--Sobic009G102400 Sobic004G263700 Sobic004G263700 Sobic001G261400--Sobic004G263700 Sobic002G230900 Sobic002G230900 Sobic001G261400--Sobic002G230900 Sobic006G124200 Sobic006G124200 Sobic001G261400--Sobic006G124200 Sobic002G218600 Sobic002G218600 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic010G155100 Sobic010G155100 Sobic001G261400--Sobic010G155100
Octagon: transcription factors


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