Gene annotation
Transcriptome id Sobic.009G103700.2,Sobic.009G103700.1
Synonym Sb09g016520
Functional annotation expressed protein
UniProt A0A1Z5R203 , C5YWB3
Pfam PF08209
Panther DB PTHR15117
NCBI CDD KOG2612; Predicted integral membrane protein
KEGG Orthology K11363; SAGA-associated factor 11
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58575 : -
RAP-DB (Rice) LOC_Os05g28370.1 : expressed protein
MaizeGDB (Corn) Zm00025a043458
Brachypodium -
Barley HORVU1Hr1G060100.8 , HORVU1Hr1G060100.4 , HORVU1Hr1G060100.5 , HORVU1Hr1G060100.6 , HORVU1Hr1G060100.7 , HORVU1Hr1G060100.1 , HORVU1Hr1G060100.2 , HORVU1Hr1G060100.3
Wheat TraesCS1B02G236500 , TraesCS1D02G224800 , TraesCS1A02G223200
Populus -


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cDNA sequences
Sobic.009G103700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
2 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
3 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
5 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
6 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
8 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
9 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
10 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
11 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
12 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
13 Sobic.004G007300 expressed protein -
14 Sobic.001G131800 expressed protein K15186: ELL-associated factor
15 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
16 Sobic.008G062000 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
17 Sobic.001G261456 - -
18 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
19 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
20 Sobic.006G109300 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic009G103700 Sobic009G103700 Sobic004G059000 Sobic004G059000 Sobic009G103700--Sobic004G059000 Sobic002G365100 Sobic002G365100 Sobic009G103700--Sobic002G365100 Sobic001G061700 Sobic001G061700 Sobic009G103700--Sobic001G061700 Sobic008G139700 Sobic008G139700 Sobic009G103700--Sobic008G139700 Sobic003G051200 Sobic003G051200 Sobic009G103700--Sobic003G051200 Sobic003G248500 Sobic003G248500 Sobic009G103700--Sobic003G248500 Sobic002G313500 Sobic002G313500 Sobic009G103700--Sobic002G313500 Sobic007G132400 Sobic007G132400 Sobic009G103700--Sobic007G132400 Sobic003G359300 Sobic003G359300 Sobic009G103700--Sobic003G359300 Sobic004G305600 Sobic004G305600 Sobic004G059000--Sobic004G305600 Sobic004G059000--Sobic001G061700 Sobic003G250500 Sobic003G250500 Sobic004G059000--Sobic003G250500 Sobic007G019800 Sobic007G019800 Sobic004G059000--Sobic007G019800 Sobic004G253000 Sobic004G253000 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic002G256300 Sobic002G256300 Sobic004G059000--Sobic002G256300 Sobic004G059000--Sobic002G365100 Sobic003G405700 Sobic003G405700 Sobic004G059000--Sobic003G405700 Sobic003G185200 Sobic003G185200 Sobic002G365100--Sobic003G185200 Sobic003G261300 Sobic003G261300 Sobic002G365100--Sobic003G261300 Sobic002G365100--Sobic003G248500 Sobic002G365100--Sobic003G359300 Sobic004G246700 Sobic004G246700 Sobic002G365100--Sobic004G246700 Sobic010G055500 Sobic010G055500 Sobic002G365100--Sobic010G055500 Sobic010G174800 Sobic010G174800 Sobic002G365100--Sobic010G174800 Sobic001G028400 Sobic001G028400 Sobic002G365100--Sobic001G028400 Sobic006G128800 Sobic006G128800 Sobic002G365100--Sobic006G128800 Sobic001G061700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic001G061700--Sobic002G272600 Sobic003G350600 Sobic003G350600 Sobic001G061700--Sobic003G350600 Sobic007G205000 Sobic007G205000 Sobic001G061700--Sobic007G205000 Sobic001G061700--Sobic002G365100 Sobic010G105600 Sobic010G105600 Sobic001G061700--Sobic010G105600 Sobic003G273500 Sobic003G273500 Sobic001G061700--Sobic003G273500 Sobic001G061700--Sobic001G028400 Sobic002G378200 Sobic002G378200 Sobic001G061700--Sobic002G378200 Sobic008G139700--Sobic002G313500 Sobic010G017800 Sobic010G017800 Sobic008G139700--Sobic010G017800 Sobic001G080000 Sobic001G080000 Sobic008G139700--Sobic001G080000 Sobic001G143500 Sobic001G143500 Sobic008G139700--Sobic001G143500 Sobic002G180000 Sobic002G180000 Sobic008G139700--Sobic002G180000 Sobic003G045400 Sobic003G045400 Sobic008G139700--Sobic003G045400 Sobic008G139700--Sobic007G205000 Sobic006G267300 Sobic006G267300 Sobic008G139700--Sobic006G267300 Sobic008G139700--Sobic010G105600 Sobic003G051200--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G051200--Sobic004G283000 Sobic001G390500 Sobic001G390500 Sobic003G051200--Sobic001G390500 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic003G051200--Sobic002G365100 Sobic002G388200 Sobic002G388200 Sobic003G051200--Sobic002G388200 Sobic001G083600 Sobic001G083600 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200 Sobic003G248500--Sobic003G359300 Sobic003G248500--Sobic004G283000 Sobic003G248500--Sobic010G174800 Sobic003G248500--Sobic001G390500 Sobic002G197100 Sobic002G197100 Sobic003G248500--Sobic002G197100 Sobic003G248500--Sobic003G185200 Sobic003G248500--Sobic002G365100 Sobic003G248500--Sobic003G051200 Sobic003G248500--Sobic006G128800 Sobic002G313500--Sobic001G143500 Sobic002G313500--Sobic001G371200 Sobic004G350100 Sobic004G350100 Sobic002G313500--Sobic004G350100 Sobic002G313500--Sobic002G378200 Sobic002G313500--Sobic004G283000 Sobic002G313500--Sobic008G139700 Sobic004G007300 Sobic004G007300 Sobic002G313500--Sobic004G007300 Sobic001G466700 Sobic001G466700 Sobic002G313500--Sobic001G466700 Sobic002G313500--Sobic010G017800 Sobic004G084300 Sobic004G084300 Sobic007G132400--Sobic004G084300 Sobic003G241200 Sobic003G241200 Sobic007G132400--Sobic003G241200 Sobic008G067600 Sobic008G067600 Sobic007G132400--Sobic008G067600 Sobic007G104800 Sobic007G104800 Sobic007G132400--Sobic007G104800 Sobic003G220200 Sobic003G220200 Sobic007G132400--Sobic003G220200 Sobic001G107500 Sobic001G107500 Sobic007G132400--Sobic001G107500 Sobic003G081000 Sobic003G081000 Sobic007G132400--Sobic003G081000 Sobic002G320500 Sobic002G320500 Sobic007G132400--Sobic002G320500 Sobic002G310200 Sobic002G310200 Sobic007G132400--Sobic002G310200 Sobic010G033400 Sobic010G033400 Sobic003G359300--Sobic010G033400 Sobic004G263900 Sobic004G263900 Sobic003G359300--Sobic004G263900 Sobic003G359300--Sobic003G248500 Sobic007G063200 Sobic007G063200 Sobic003G359300--Sobic007G063200 Sobic003G359300--Sobic001G028400 Sobic008G174300 Sobic008G174300 Sobic003G359300--Sobic008G174300 Sobic001G056200 Sobic001G056200 Sobic003G359300--Sobic001G056200 Sobic003G359300--Sobic002G365100 Sobic002G058300 Sobic002G058300 Sobic003G359300--Sobic002G058300
Octagon: transcription factors


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