Gene annotation
Transcriptome id Sobic.009G105000.1
Synonym Sb09g017080, TBL29, ESK1
Functional annotation leaf senescence related protein, putative, expressed
UniProt C5YWD5
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55990 : Plant protein of unknown function (DUF828)
RAP-DB (Rice) LOC_Os05g28630.1 : leaf senescence related protein, putative, expressed
MaizeGDB (Corn) Zm00025a053657 , Zm00025a037141 , Zm00025a043430
Brachypodium KQK06763
Barley HORVU1Hr1G059720.1 , HORVU1Hr1G059720.2 , HORVU1Hr1G059720.3 , HORVU1Hr1G059720.4 , HORVU1Hr1G059760.4 , HORVU1Hr1G059760.1 , HORVU1Hr1G059760.2 , HORVU1Hr1G059760.3
Wheat TraesCS1B02G238600 , TraesCS1B02G238600 , TraesCS1B02G238600 , TraesCS1A02G225200 , TraesCS1A02G225200 , TraesCS1A02G225200 , TraesCS1D02G226600 , TraesCS1D02G226600 , TraesCS1D02G226600
Populus -


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cDNA sequences
Sobic.009G105000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G242000 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
2 Sobic.003G051100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
3 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
4 Sobic.007G084200 expressed protein -
5 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
6 Sobic.002G388100 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
7 Sobic.001G116100 threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed K01754: E4.3.1.19, ilvA, threonine dehydratase
8 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
10 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
11 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
12 Sobic.008G169800 galactosyltransferase family protein, putative, expressed -
13 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
14 Sobic.007G037000 serine esterase family protein, putative, expressed -
15 Sobic.001G123201 - -
16 Sobic.005G187500 GRF-interacting factor 2, putative, expressed -
17 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
18 Sobic.010G233900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
19 Sobic.001G127400 yippee zinc-binding protein, putative, expressed -
20 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -


Gene co-expression network
sample Sobic009G105000 Sobic009G105000 Sobic004G242000 Sobic004G242000 Sobic009G105000--Sobic004G242000 Sobic003G051100 Sobic003G051100 Sobic009G105000--Sobic003G051100 Sobic004G015300 Sobic004G015300 Sobic009G105000--Sobic004G015300 Sobic007G084200 Sobic007G084200 Sobic009G105000--Sobic007G084200 Sobic009G192500 Sobic009G192500 Sobic009G105000--Sobic009G192500 Sobic002G388100 Sobic002G388100 Sobic009G105000--Sobic002G388100 Sobic001G116100 Sobic001G116100 Sobic009G105000--Sobic001G116100 Sobic003G345000 Sobic003G345000 Sobic009G105000--Sobic003G345000 Sobic006G218900 Sobic006G218900 Sobic009G105000--Sobic006G218900 Sobic010G256200 Sobic010G256200 Sobic004G242000--Sobic010G256200 Sobic002G252900 Sobic002G252900 Sobic004G242000--Sobic002G252900 Sobic004G242000--Sobic003G051100 Sobic004G242000--Sobic004G015300 Sobic004G242000--Sobic002G388100 Sobic004G242000--Sobic009G105000 Sobic003G415100 Sobic003G415100 Sobic004G242000--Sobic003G415100 Sobic002G051200 Sobic002G051200 Sobic004G242000--Sobic002G051200 Sobic009G060400 Sobic009G060400 Sobic004G242000--Sobic009G060400 Sobic003G051100--Sobic004G242000 Sobic001G005800 Sobic001G005800 Sobic003G051100--Sobic001G005800 Sobic009G212100 Sobic009G212100 Sobic003G051100--Sobic009G212100 Sobic009G254000 Sobic009G254000 Sobic003G051100--Sobic009G254000 Sobic009G167100 Sobic009G167100 Sobic003G051100--Sobic009G167100 Sobic003G051100--Sobic007G084200 Sobic003G051100--Sobic006G218900 Sobic004G315700 Sobic004G315700 Sobic003G051100--Sobic004G315700 Sobic003G051100--Sobic003G415100 Sobic001G296800 Sobic001G296800 Sobic004G015300--Sobic001G296800 Sobic006G122200 Sobic006G122200 Sobic004G015300--Sobic006G122200 Sobic004G015300--Sobic009G212100 Sobic004G015300--Sobic004G315700 Sobic005G047000 Sobic005G047000 Sobic004G015300--Sobic005G047000 Sobic001G487200 Sobic001G487200 Sobic004G015300--Sobic001G487200 Sobic006G245700 Sobic006G245700 Sobic004G015300--Sobic006G245700 Sobic004G015300--Sobic007G084200 Sobic001G115500 Sobic001G115500 Sobic004G015300--Sobic001G115500 Sobic003G226700 Sobic003G226700 Sobic007G084200--Sobic003G226700 Sobic007G084200--Sobic009G212100 Sobic003G420300 Sobic003G420300 Sobic007G084200--Sobic003G420300 Sobic007G084200--Sobic001G487200 Sobic007G084200--Sobic003G345000 Sobic003G292700 Sobic003G292700 Sobic007G084200--Sobic003G292700 Sobic007G084200--Sobic006G218900 Sobic001G369800 Sobic001G369800 Sobic007G084200--Sobic001G369800 Sobic007G084200--Sobic004G315700 Sobic003G132700 Sobic003G132700 Sobic009G192500--Sobic003G132700 Sobic007G117100 Sobic007G117100 Sobic009G192500--Sobic007G117100 Sobic002G430900 Sobic002G430900 Sobic009G192500--Sobic002G430900 Sobic009G022100 Sobic009G022100 Sobic009G192500--Sobic009G022100 Sobic007G125700 Sobic007G125700 Sobic009G192500--Sobic007G125700 Sobic002G095700 Sobic002G095700 Sobic009G192500--Sobic002G095700 Sobic003G253400 Sobic003G253400 Sobic009G192500--Sobic003G253400 Sobic002G223300 Sobic002G223300 Sobic009G192500--Sobic002G223300 Sobic004G229100 Sobic004G229100 Sobic009G192500--Sobic004G229100 Sobic002G388100--Sobic004G242000 Sobic002G388100--Sobic002G051200 Sobic002G388100--Sobic010G256200 Sobic001G154400 Sobic001G154400 Sobic002G388100--Sobic001G154400 Sobic001G448200 Sobic001G448200 Sobic002G388100--Sobic001G448200 Sobic002G356800 Sobic002G356800 Sobic002G388100--Sobic002G356800 Sobic004G345100 Sobic004G345100 Sobic002G388100--Sobic004G345100 Sobic001G349400 Sobic001G349400 Sobic002G388100--Sobic001G349400 Sobic006G013900 Sobic006G013900 Sobic002G388100--Sobic006G013900 Sobic001G218200 Sobic001G218200 Sobic001G116100--Sobic001G218200 Sobic001G116100--Sobic002G095700 Sobic003G354100 Sobic003G354100 Sobic001G116100--Sobic003G354100 Sobic007G188900 Sobic007G188900 Sobic001G116100--Sobic007G188900 Sobic002G177400 Sobic002G177400 Sobic001G116100--Sobic002G177400 Sobic002G362300 Sobic002G362300 Sobic001G116100--Sobic002G362300 Sobic001G346700 Sobic001G346700 Sobic001G116100--Sobic001G346700 Sobic008G073000 Sobic008G073000 Sobic001G116100--Sobic008G073000 Sobic004G347100 Sobic004G347100 Sobic001G116100--Sobic004G347100 Sobic003G283600 Sobic003G283600 Sobic003G345000--Sobic003G283600 Sobic003G345000--Sobic004G315700 Sobic001G540700 Sobic001G540700 Sobic003G345000--Sobic001G540700 Sobic003G345000--Sobic006G218900 Sobic003G345000--Sobic003G420300 Sobic003G345000--Sobic007G084200 Sobic009G225500 Sobic009G225500 Sobic003G345000--Sobic009G225500 Sobic003G345000--Sobic009G212100 Sobic003G345000--Sobic003G292700 Sobic006G218900--Sobic004G315700 Sobic006G218900--Sobic001G369800 Sobic006G218900--Sobic003G226700 Sobic006G218900--Sobic001G540700 Sobic002G253900 Sobic002G253900 Sobic006G218900--Sobic002G253900 Sobic006G218900--Sobic003G345000 Sobic006G218900--Sobic001G487200 Sobic002G284100 Sobic002G284100 Sobic006G218900--Sobic002G284100 Sobic006G218900--Sobic007G084200
Octagon: transcription factors


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