Gene annotation
Transcriptome id Sobic.009G112800.6,Sobic.009G112800.3,Sobic.009G112800.4,Sobic.009G112800.2,Sobic.009G112800.5
Synonym Sb09g018080
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt A0A1Z5R254 , A0A1Z5R3A9 , A0A1B6P7V6 , A0A1Z5R263 , A0A1Z5R340
Pfam PF00400
Panther DB PTHR19850 PTHR19850:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0007165signal transduction


Orthologs (automatic annotation)
TAIR AT3G06880 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os05g30010.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043359
Brachypodium PNT71459 , PNT71458 , PNT71457 , KQK06690
Barley HORVU1Hr1G058790.6 , HORVU1Hr1G058790.4 , HORVU1Hr1G058790.2 , HORVU1Hr1G058790.3 , HORVU1Hr1G058790.1 , HORVU1Hr1G058790.8 , HORVU1Hr1G058790.9 , HORVU1Hr1G058790.34 , HORVU1Hr1G058790.32 , HORVU1Hr1G058790.33 , HORVU1Hr1G058790.30 , HORVU1Hr1G058790.31 , HORVU4Hr1G048060.1 , HORVU1Hr1G058790.7 , HORVU1Hr1G058790.5 , HORVU1Hr1G058790.18 , HORVU1Hr1G058790.19 , HORVU1Hr1G058790.14 , HORVU1Hr1G058790.15 , HORVU1Hr1G058790.16 , HORVU1Hr1G058790.17 , HORVU1Hr1G058790.10 , HORVU1Hr1G058790.11 , HORVU1Hr1G058790.12 , HORVU1Hr1G058790.13 , HORVU1Hr1G058790.21 , HORVU1Hr1G058790.20 , HORVU1Hr1G058790.23 , HORVU1Hr1G058790.22 , HORVU1Hr1G058790.25 , HORVU1Hr1G058790.24 , HORVU1Hr1G058790.27 , HORVU1Hr1G058790.26 , HORVU1Hr1G058790.29 , HORVU1Hr1G058790.28
Wheat TraesCS1D02G231700 , TraesCS1B02G243900 , TraesCS1B02G243900 , TraesCS1B02G243900 , TraesCS1A02G230300 , TraesCS1D02G231700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G290800 no apical meristem protein, putative, expressed -
2 Sobic.004G279400 ZR1 protein, putative, expressed -
3 Sobic.007G122400 HOTHEAD precursor, putative, expressed K15403: ACE, fatty acid omega-hydroxy dehydrogenase
4 Sobic.001G285100 expressed protein -
5 Sobic.007G194000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
6 Sobic.002G176700 receptor-like protein kinase 2, putative, expressed -
7 Sobic.010G054150 - -
8 Sobic.001G449500 ternary complex factor MIP1, putative, expressed -
9 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
10 Sobic.005G228650 - -
11 Sobic.010G042300 DTA2, putative, expressed -
12 Sobic.004G070150 - -
13 Sobic.005G070951 - -
14 Sobic.003G399800 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
15 Sobic.002G181800 HOTHEAD precursor, putative, expressed K15403: ACE, fatty acid omega-hydroxy dehydrogenase
16 Sobic.001G245100 - -
17 Sobic.001G187900 disease resistance protein, putative, expressed -
18 Sobic.006G279100 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
19 Sobic.005G182100 Leucine Rich Repeat family protein, expressed -
20 Sobic.007G016200 expressed protein -


Gene co-expression network
sample Sobic009G112800 Sobic009G112800 Sobic002G290800 Sobic002G290800 Sobic009G112800--Sobic002G290800 Sobic004G279400 Sobic004G279400 Sobic009G112800--Sobic004G279400 Sobic007G122400 Sobic007G122400 Sobic009G112800--Sobic007G122400 Sobic001G285100 Sobic001G285100 Sobic009G112800--Sobic001G285100 Sobic007G194000 Sobic007G194000 Sobic009G112800--Sobic007G194000 Sobic002G176700 Sobic002G176700 Sobic009G112800--Sobic002G176700 Sobic010G054150 Sobic010G054150 Sobic009G112800--Sobic010G054150 Sobic001G449500 Sobic001G449500 Sobic009G112800--Sobic001G449500 Sobic003G276400 Sobic003G276400 Sobic009G112800--Sobic003G276400 Sobic007G137750 Sobic007G137750 Sobic002G290800--Sobic007G137750 Sobic002G290800--Sobic010G054150 Sobic004G070150 Sobic004G070150 Sobic002G290800--Sobic004G070150 Sobic002G290800--Sobic007G194000 Sobic006G248450 Sobic006G248450 Sobic002G290800--Sobic006G248450 Sobic006G165501 Sobic006G165501 Sobic002G290800--Sobic006G165501 Sobic005G182100 Sobic005G182100 Sobic002G290800--Sobic005G182100 Sobic007G052000 Sobic007G052000 Sobic002G290800--Sobic007G052000 Sobic002G208301 Sobic002G208301 Sobic002G290800--Sobic002G208301 Sobic004G074400 Sobic004G074400 Sobic004G279400--Sobic004G074400 Sobic002G208700 Sobic002G208700 Sobic004G279400--Sobic002G208700 Sobic006G279100 Sobic006G279100 Sobic004G279400--Sobic006G279100 Sobic007G149500 Sobic007G149500 Sobic004G279400--Sobic007G149500 Sobic001G150100 Sobic001G150100 Sobic004G279400--Sobic001G150100 Sobic003G068150 Sobic003G068150 Sobic004G279400--Sobic003G068150 Sobic009G180900 Sobic009G180900 Sobic004G279400--Sobic009G180900 Sobic009G020600 Sobic009G020600 Sobic004G279400--Sobic009G020600 Sobic006G165200 Sobic006G165200 Sobic004G279400--Sobic006G165200 Sobic003G341900 Sobic003G341900 Sobic007G122400--Sobic003G341900 Sobic010G001400 Sobic010G001400 Sobic007G122400--Sobic010G001400 Sobic007G122400--Sobic002G176700 Sobic009G191900 Sobic009G191900 Sobic007G122400--Sobic009G191900 Sobic001G145550 Sobic001G145550 Sobic007G122400--Sobic001G145550 Sobic009G173700 Sobic009G173700 Sobic007G122400--Sobic009G173700 Sobic007G122400--Sobic007G149500 Sobic001G100300 Sobic001G100300 Sobic007G122400--Sobic001G100300 Sobic009G213150 Sobic009G213150 Sobic007G122400--Sobic009G213150 Sobic001G187900 Sobic001G187900 Sobic001G285100--Sobic001G187900 Sobic005G228650 Sobic005G228650 Sobic001G285100--Sobic005G228650 Sobic001G245100 Sobic001G245100 Sobic001G285100--Sobic001G245100 Sobic001G285100--Sobic007G149500 Sobic010G042300 Sobic010G042300 Sobic001G285100--Sobic010G042300 Sobic001G385132 Sobic001G385132 Sobic001G285100--Sobic001G385132 Sobic002G046150 Sobic002G046150 Sobic001G285100--Sobic002G046150 Sobic003G433000 Sobic003G433000 Sobic001G285100--Sobic003G433000 Sobic006G268100 Sobic006G268100 Sobic001G285100--Sobic006G268100 Sobic007G194000--Sobic010G042300 Sobic001G090700 Sobic001G090700 Sobic007G194000--Sobic001G090700 Sobic007G194000--Sobic005G182100 Sobic008G170800 Sobic008G170800 Sobic007G194000--Sobic008G170800 Sobic001G454600 Sobic001G454600 Sobic007G194000--Sobic001G454600 Sobic003G001650 Sobic003G001650 Sobic007G194000--Sobic003G001650 Sobic005G014400 Sobic005G014400 Sobic007G194000--Sobic005G014400 Sobic001G093732 Sobic001G093732 Sobic007G194000--Sobic001G093732 Sobic007G194000--Sobic003G276400 Sobic002G375500 Sobic002G375500 Sobic002G176700--Sobic002G375500 Sobic002G176700--Sobic003G341900 Sobic002G176700--Sobic001G145550 Sobic008G165500 Sobic008G165500 Sobic002G176700--Sobic008G165500 Sobic005G168200 Sobic005G168200 Sobic002G176700--Sobic005G168200 Sobic002G163400 Sobic002G163400 Sobic002G176700--Sobic002G163400 Sobic007G174500 Sobic007G174500 Sobic002G176700--Sobic007G174500 Sobic006G145300 Sobic006G145300 Sobic002G176700--Sobic006G145300 Sobic004G072600 Sobic004G072600 Sobic002G176700--Sobic004G072600 Sobic010G054150--Sobic006G248450 Sobic010G054150--Sobic007G052000 Sobic010G054150--Sobic004G070150 Sobic010G274700 Sobic010G274700 Sobic010G054150--Sobic010G274700 Sobic002G226200 Sobic002G226200 Sobic010G054150--Sobic002G226200 Sobic007G016200 Sobic007G016200 Sobic010G054150--Sobic007G016200 Sobic010G054150--Sobic007G137750 Sobic010G054150--Sobic005G182100 Sobic002G208500 Sobic002G208500 Sobic010G054150--Sobic002G208500 Sobic004G073800 Sobic004G073800 Sobic001G449500--Sobic004G073800 Sobic009G166400 Sobic009G166400 Sobic001G449500--Sobic009G166400 Sobic004G266100 Sobic004G266100 Sobic001G449500--Sobic004G266100 Sobic002G095200 Sobic002G095200 Sobic001G449500--Sobic002G095200 Sobic001G449500--Sobic003G341900 Sobic001G088400 Sobic001G088400 Sobic001G449500--Sobic001G088400 Sobic001G449500--Sobic009G112800 Sobic001G534000 Sobic001G534000 Sobic001G449500--Sobic001G534000 Sobic010G174000 Sobic010G174000 Sobic001G449500--Sobic010G174000 Sobic004G144300 Sobic004G144300 Sobic003G276400--Sobic004G144300 Sobic001G104100 Sobic001G104100 Sobic003G276400--Sobic001G104100 Sobic003G276400--Sobic003G001650 Sobic005G025400 Sobic005G025400 Sobic003G276400--Sobic005G025400 Sobic001G113400 Sobic001G113400 Sobic003G276400--Sobic001G113400 Sobic006G024400 Sobic006G024400 Sobic003G276400--Sobic006G024400 Sobic003G362800 Sobic003G362800 Sobic003G276400--Sobic003G362800 Sobic009G049100 Sobic009G049100 Sobic003G276400--Sobic009G049100 Sobic003G276400--Sobic005G014400
Octagon: transcription factors


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