Gene annotation
Transcriptome id Sobic.009G162000.1
Synonym ATGPAT5, Sb09g022430, GPAT5
Functional annotation glycerol-3-phosphate acyltransferase 8, putative, expressed
UniProt C5YZ84
Pfam -
Panther DB PTHR15486 PTHR15486:SF25
NCBI CDD -
KEGG Orthology K13508; glycerol-3-phosphate acyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11430 : glycerol-3-phosphate acyltransferase 5
RAP-DB (Rice) LOC_Os05g38350.1 : glycerol-3-phosphate acyltransferase 8, putative, expressed
MaizeGDB (Corn) Zm00025a043892 , Zm00025a037681
Brachypodium KQK08403 , PNT71120 , PNT71122 , KQK05930
Barley HORVU1Hr1G072590.8 , HORVU1Hr1G072590.9 , HORVU1Hr1G072590.4 , HORVU1Hr1G072590.5 , HORVU1Hr1G072590.6 , HORVU1Hr1G072590.7 , HORVU1Hr1G072590.2 , HORVU1Hr1G072590.3
Wheat TraesCS1A02G283100 , TraesCS4A02G248400 , TraesCS4D02G065400 , TraesCS1B02G292200 , TraesCS1D02G282300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
2 Sobic.004G052000 protein kinase, putative, expressed -
3 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.007G085300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY25, expressed -
5 Sobic.003G296700 protein kinase domain containing protein, expressed -
6 Sobic.001G196900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@CPuORF40 - conserved peptide uORF-containing transcript, expressed K14488: SAUR family protein
7 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
10 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
11 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
13 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
14 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
15 Sobic.002G278500 nodulin, putative, expressed -
16 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
17 Sobic.003G323100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G171700 U-box domain-containing protein, putative, expressed -
19 Sobic.002G335200 expressed protein -
20 Sobic.003G234000 DUF1645 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G162000 Sobic009G162000 Sobic003G353800 Sobic003G353800 Sobic009G162000--Sobic003G353800 Sobic004G052000 Sobic004G052000 Sobic009G162000--Sobic004G052000 Sobic008G042900 Sobic008G042900 Sobic009G162000--Sobic008G042900 Sobic007G085300 Sobic007G085300 Sobic009G162000--Sobic007G085300 Sobic003G296700 Sobic003G296700 Sobic009G162000--Sobic003G296700 Sobic001G196900 Sobic001G196900 Sobic009G162000--Sobic001G196900 Sobic001G341600 Sobic001G341600 Sobic009G162000--Sobic001G341600 Sobic007G122500 Sobic007G122500 Sobic009G162000--Sobic007G122500 Sobic009G217600 Sobic009G217600 Sobic009G162000--Sobic009G217600 Sobic003G353800--Sobic009G217600 Sobic003G353800--Sobic001G341600 Sobic001G441100 Sobic001G441100 Sobic003G353800--Sobic001G441100 Sobic001G035000 Sobic001G035000 Sobic003G353800--Sobic001G035000 Sobic002G278500 Sobic002G278500 Sobic003G353800--Sobic002G278500 Sobic001G077400 Sobic001G077400 Sobic003G353800--Sobic001G077400 Sobic009G217500 Sobic009G217500 Sobic003G353800--Sobic009G217500 Sobic003G353800--Sobic008G042900 Sobic003G416500 Sobic003G416500 Sobic003G353800--Sobic003G416500 Sobic004G052000--Sobic003G296700 Sobic010G076600 Sobic010G076600 Sobic004G052000--Sobic010G076600 Sobic001G051600 Sobic001G051600 Sobic004G052000--Sobic001G051600 Sobic003G234000 Sobic003G234000 Sobic004G052000--Sobic003G234000 Sobic007G057100 Sobic007G057100 Sobic004G052000--Sobic007G057100 Sobic004G052000--Sobic009G217600 Sobic006G095600 Sobic006G095600 Sobic004G052000--Sobic006G095600 Sobic001G077700 Sobic001G077700 Sobic004G052000--Sobic001G077700 Sobic001G513700 Sobic001G513700 Sobic004G052000--Sobic001G513700 Sobic008G042900--Sobic001G341600 Sobic008G042900--Sobic009G217600 Sobic008G042900--Sobic001G441100 Sobic002G140300 Sobic002G140300 Sobic008G042900--Sobic002G140300 Sobic002G131800 Sobic002G131800 Sobic008G042900--Sobic002G131800 Sobic004G280900 Sobic004G280900 Sobic008G042900--Sobic004G280900 Sobic009G027900 Sobic009G027900 Sobic008G042900--Sobic009G027900 Sobic006G066200 Sobic006G066200 Sobic008G042900--Sobic006G066200 Sobic008G042900--Sobic001G077400 Sobic004G171700 Sobic004G171700 Sobic007G085300--Sobic004G171700 Sobic010G064000 Sobic010G064000 Sobic007G085300--Sobic010G064000 Sobic009G200700 Sobic009G200700 Sobic007G085300--Sobic009G200700 Sobic003G380900 Sobic003G380900 Sobic007G085300--Sobic003G380900 Sobic001G190100 Sobic001G190100 Sobic007G085300--Sobic001G190100 Sobic001G391500 Sobic001G391500 Sobic007G085300--Sobic001G391500 Sobic001G459800 Sobic001G459800 Sobic007G085300--Sobic001G459800 Sobic003G228900 Sobic003G228900 Sobic007G085300--Sobic003G228900 Sobic001G471200 Sobic001G471200 Sobic007G085300--Sobic001G471200 Sobic001G516600 Sobic001G516600 Sobic003G296700--Sobic001G516600 Sobic009G208800 Sobic009G208800 Sobic003G296700--Sobic009G208800 Sobic009G220200 Sobic009G220200 Sobic003G296700--Sobic009G220200 Sobic003G296700--Sobic001G341600 Sobic003G296700--Sobic009G217600 Sobic003G296700--Sobic010G076600 Sobic003G296700--Sobic006G095600 Sobic002G374100 Sobic002G374100 Sobic003G296700--Sobic002G374100 Sobic002G294700 Sobic002G294700 Sobic003G296700--Sobic002G294700 Sobic001G192800 Sobic001G192800 Sobic001G196900--Sobic001G192800 Sobic001G196900--Sobic001G341600 Sobic001G196900--Sobic009G217500 Sobic007G145700 Sobic007G145700 Sobic001G196900--Sobic007G145700 Sobic001G196900--Sobic009G217600 Sobic010G102000 Sobic010G102000 Sobic001G196900--Sobic010G102000 Sobic001G196900--Sobic001G035000 Sobic003G341100 Sobic003G341100 Sobic001G196900--Sobic003G341100 Sobic001G196900--Sobic001G441100 Sobic001G341600--Sobic009G217600 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G341600--Sobic001G077400 Sobic001G341600--Sobic004G280900 Sobic001G341600--Sobic002G140300 Sobic001G341600--Sobic003G353800 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic007G122500--Sobic001G035000 Sobic007G122500--Sobic001G441100 Sobic005G037000 Sobic005G037000 Sobic007G122500--Sobic005G037000 Sobic004G032300 Sobic004G032300 Sobic007G122500--Sobic004G032300 Sobic009G120800 Sobic009G120800 Sobic007G122500--Sobic009G120800 Sobic002G225700 Sobic002G225700 Sobic007G122500--Sobic002G225700 Sobic007G126300 Sobic007G126300 Sobic007G122500--Sobic007G126300 Sobic006G187900 Sobic006G187900 Sobic007G122500--Sobic006G187900 Sobic007G122500--Sobic009G217600 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic001G209800 Sobic001G209800 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500
Octagon: transcription factors


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