Gene annotation
Transcriptome id Sobic.009G213000.1
Synonym HAB1
Functional annotation protein phosphatase 2C, putative, expressed
UniProt A0A1B6P9T6
Pfam PF00481
Panther DB PTHR13832:SF335 PTHR13832
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14497; protein phosphatase 2C
Gene Ontology GO:0004722; protein serine/threonine phosphatase activity GO:0006470protein dephosphorylation GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G72770 : homology to ABI1
RAP-DB (Rice) LOC_Os05g46040.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a038315 , Zm00025a044394
Brachypodium KQK05177
Barley HORVU1Hr1G080290.4 , HORVU1Hr1G080290.5 , HORVU1Hr1G080290.2 , HORVU1Hr1G080290.3 , HORVU1Hr1G080290.1
Wheat TraesCS1B02G375100 , TraesCS1A02G358600 , TraesCS1D02G363500
Populus -


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cDNA sequences
Sobic.009G213000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
2 Sobic.007G047700 no apical meristem protein, putative, expressed -
3 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
4 Sobic.006G086100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
5 Sobic.001G538700 exostosin family domain containing protein, expressed -
6 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
7 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
8 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G173900 ACT domain containing protein, expressed -
10 Sobic.009G042700 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
11 Sobic.002G405900 zinc finger, RING-type, putative, expressed -
12 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
13 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
14 Sobic.002G378800 GRAM domain containing protein, expressed -
15 Sobic.008G123500 auxilin, putative, expressed -
16 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
17 Sobic.007G196900 expressed protein -
18 Sobic.010G093100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
19 Sobic.004G004200 expressed protein -
20 Sobic.001G373200 lipase precursor, putative, expressed -


Gene co-expression network
sample Sobic009G213000 Sobic009G213000 Sobic003G281900 Sobic003G281900 Sobic009G213000--Sobic003G281900 Sobic007G047700 Sobic007G047700 Sobic009G213000--Sobic007G047700 Sobic001G350700 Sobic001G350700 Sobic009G213000--Sobic001G350700 Sobic006G086100 Sobic006G086100 Sobic009G213000--Sobic006G086100 Sobic001G538700 Sobic001G538700 Sobic009G213000--Sobic001G538700 Sobic006G271200 Sobic006G271200 Sobic009G213000--Sobic006G271200 Sobic002G270500 Sobic002G270500 Sobic009G213000--Sobic002G270500 Sobic001G298500 Sobic001G298500 Sobic009G213000--Sobic001G298500 Sobic001G173900 Sobic001G173900 Sobic009G213000--Sobic001G173900 Sobic003G272400 Sobic003G272400 Sobic003G281900--Sobic003G272400 Sobic009G097300 Sobic009G097300 Sobic003G281900--Sobic009G097300 Sobic002G306000 Sobic002G306000 Sobic003G281900--Sobic002G306000 Sobic003G126300 Sobic003G126300 Sobic003G281900--Sobic003G126300 Sobic004G353600 Sobic004G353600 Sobic003G281900--Sobic004G353600 Sobic003G397500 Sobic003G397500 Sobic003G281900--Sobic003G397500 Sobic003G281900--Sobic009G213000 Sobic009G079300 Sobic009G079300 Sobic003G281900--Sobic009G079300 Sobic003G281900--Sobic007G047700 Sobic003G036800 Sobic003G036800 Sobic007G047700--Sobic003G036800 Sobic008G123500 Sobic008G123500 Sobic007G047700--Sobic008G123500 Sobic004G002100 Sobic004G002100 Sobic007G047700--Sobic004G002100 Sobic009G184700 Sobic009G184700 Sobic007G047700--Sobic009G184700 Sobic001G095500 Sobic001G095500 Sobic007G047700--Sobic001G095500 Sobic001G440600 Sobic001G440600 Sobic007G047700--Sobic001G440600 Sobic007G047700--Sobic003G281900 Sobic007G047700--Sobic001G173900 Sobic003G195500 Sobic003G195500 Sobic007G047700--Sobic003G195500 Sobic001G003000 Sobic001G003000 Sobic001G350700--Sobic001G003000 Sobic001G217400 Sobic001G217400 Sobic001G350700--Sobic001G217400 Sobic006G090500 Sobic006G090500 Sobic001G350700--Sobic006G090500 Sobic001G350700--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic001G350700--Sobic006G214200 Sobic001G305500 Sobic001G305500 Sobic001G350700--Sobic001G305500 Sobic001G350700--Sobic001G440600 Sobic003G228100 Sobic003G228100 Sobic001G350700--Sobic003G228100 Sobic004G341200 Sobic004G341200 Sobic001G350700--Sobic004G341200 Sobic003G000600 Sobic003G000600 Sobic006G086100--Sobic003G000600 Sobic004G236550 Sobic004G236550 Sobic006G086100--Sobic004G236550 Sobic009G118600 Sobic009G118600 Sobic006G086100--Sobic009G118600 Sobic008G144500 Sobic008G144500 Sobic006G086100--Sobic008G144500 Sobic008G190900 Sobic008G190900 Sobic006G086100--Sobic008G190900 Sobic001G235500 Sobic001G235500 Sobic006G086100--Sobic001G235500 Sobic006G115300 Sobic006G115300 Sobic006G086100--Sobic006G115300 Sobic006G086100--Sobic003G281900 Sobic009G236300 Sobic009G236300 Sobic006G086100--Sobic009G236300 Sobic001G538700--Sobic008G123500 Sobic001G096000 Sobic001G096000 Sobic001G538700--Sobic001G096000 Sobic001G538700--Sobic001G095500 Sobic007G196900 Sobic007G196900 Sobic001G538700--Sobic007G196900 Sobic006G251000 Sobic006G251000 Sobic001G538700--Sobic006G251000 Sobic001G251200 Sobic001G251200 Sobic001G538700--Sobic001G251200 Sobic007G119200 Sobic007G119200 Sobic001G538700--Sobic007G119200 Sobic001G466700 Sobic001G466700 Sobic001G538700--Sobic001G466700 Sobic004G358400 Sobic004G358400 Sobic001G538700--Sobic004G358400 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic009G126900 Sobic009G126900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic010G043400 Sobic010G043400 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic006G271200--Sobic010G072800 Sobic007G024700 Sobic007G024700 Sobic002G270500--Sobic007G024700 Sobic001G207400 Sobic001G207400 Sobic002G270500--Sobic001G207400 Sobic004G355000 Sobic004G355000 Sobic002G270500--Sobic004G355000 Sobic005G157000 Sobic005G157000 Sobic002G270500--Sobic005G157000 Sobic002G430000 Sobic002G430000 Sobic002G270500--Sobic002G430000 Sobic002G270500--Sobic009G126900 Sobic009G094300 Sobic009G094300 Sobic002G270500--Sobic009G094300 Sobic004G113400 Sobic004G113400 Sobic002G270500--Sobic004G113400 Sobic004G269200 Sobic004G269200 Sobic002G270500--Sobic004G269200 Sobic009G000200 Sobic009G000200 Sobic001G298500--Sobic009G000200 Sobic001G298500--Sobic009G079300 Sobic001G298500--Sobic006G271200 Sobic001G298500--Sobic001G350700 Sobic008G189200 Sobic008G189200 Sobic001G298500--Sobic008G189200 Sobic004G004200 Sobic004G004200 Sobic001G298500--Sobic004G004200 Sobic010G107000 Sobic010G107000 Sobic001G298500--Sobic010G107000 Sobic007G092700 Sobic007G092700 Sobic001G298500--Sobic007G092700 Sobic006G125400 Sobic006G125400 Sobic001G298500--Sobic006G125400 Sobic004G092100 Sobic004G092100 Sobic001G173900--Sobic004G092100 Sobic001G173900--Sobic007G047700 Sobic003G278500 Sobic003G278500 Sobic001G173900--Sobic003G278500 Sobic003G056100 Sobic003G056100 Sobic001G173900--Sobic003G056100 Sobic008G191100 Sobic008G191100 Sobic001G173900--Sobic008G191100 Sobic003G328600 Sobic003G328600 Sobic001G173900--Sobic003G328600 Sobic003G248200 Sobic003G248200 Sobic001G173900--Sobic003G248200 Sobic009G167600 Sobic009G167600 Sobic001G173900--Sobic009G167600 Sobic002G215100 Sobic002G215100 Sobic001G173900--Sobic002G215100
Octagon: transcription factors


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