Gene annotation
Transcriptome id Sobic.010G060400.1
Synonym Sb10g005230
Functional annotation leucoanthocyanidin dioxygenase, putative, expressed
UniProt A0A1W0VRR5
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF157
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G20400 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os06g08060.1 : leucoanthocyanidin dioxygenase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G273800 cytochrome P450, putative, expressed -
2 Sobic.005G068300 - -
3 Sobic.003G089700 - -
4 Sobic.003G339800 expressed protein -
5 Sobic.001G542600 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
6 Sobic.009G111800 OsFBO5 - F-box and other domain containing protein, expressed -
7 Sobic.004G197700 expressed protein -
8 Sobic.001G176700 CBS domain containing protein, expressed -
9 Sobic.001G242700 MBTB35 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.002G025000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor like protein kinase, putative, expressed -
11 Sobic.003G421600 - -
12 Sobic.002G130500 expressed protein -
13 Sobic.006G168500 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.010G091100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
15 Sobic.001G167800 single-stranded DNA-binding protein, putative, expressed -
16 Sobic.006G122100 pentatricopeptide, putative, expressed -
17 Sobic.003G337200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat-containing protein, putative, expressed -
18 Sobic.004G109100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.005G228600 spo0B-associated GTP-binding protein, putative, expressed -
20 Sobic.003G097701 - -


Gene co-expression network
sample Sobic010G060400 Sobic010G060400 Sobic002G273800 Sobic002G273800 Sobic010G060400--Sobic002G273800 Sobic005G068300 Sobic005G068300 Sobic010G060400--Sobic005G068300 Sobic003G089700 Sobic003G089700 Sobic010G060400--Sobic003G089700 Sobic003G339800 Sobic003G339800 Sobic010G060400--Sobic003G339800 Sobic001G542600 Sobic001G542600 Sobic010G060400--Sobic001G542600 Sobic009G111800 Sobic009G111800 Sobic010G060400--Sobic009G111800 Sobic004G197700 Sobic004G197700 Sobic010G060400--Sobic004G197700 Sobic001G176700 Sobic001G176700 Sobic010G060400--Sobic001G176700 Sobic001G242700 Sobic001G242700 Sobic010G060400--Sobic001G242700 Sobic001G363200 Sobic001G363200 Sobic002G273800--Sobic001G363200 Sobic004G138400 Sobic004G138400 Sobic002G273800--Sobic004G138400 Sobic002G130500 Sobic002G130500 Sobic002G273800--Sobic002G130500 Sobic002G064200 Sobic002G064200 Sobic002G273800--Sobic002G064200 Sobic002G273800--Sobic009G111800 Sobic002G273800--Sobic010G060400 Sobic004G109100 Sobic004G109100 Sobic002G273800--Sobic004G109100 Sobic001G299400 Sobic001G299400 Sobic002G273800--Sobic001G299400 Sobic003G242800 Sobic003G242800 Sobic002G273800--Sobic003G242800 Sobic003G172450 Sobic003G172450 Sobic005G068300--Sobic003G172450 Sobic010G107901 Sobic010G107901 Sobic005G068300--Sobic010G107901 Sobic004G234766 Sobic004G234766 Sobic005G068300--Sobic004G234766 Sobic002G397700 Sobic002G397700 Sobic005G068300--Sobic002G397700 Sobic006G093550 Sobic006G093550 Sobic005G068300--Sobic006G093550 Sobic003G337200 Sobic003G337200 Sobic005G068300--Sobic003G337200 Sobic010G225400 Sobic010G225400 Sobic005G068300--Sobic010G225400 Sobic001G249900 Sobic001G249900 Sobic005G068300--Sobic001G249900 Sobic005G030266 Sobic005G030266 Sobic005G068300--Sobic005G030266 Sobic008G157700 Sobic008G157700 Sobic003G089700--Sobic008G157700 Sobic001G365332 Sobic001G365332 Sobic003G089700--Sobic001G365332 Sobic006G017266 Sobic006G017266 Sobic003G089700--Sobic006G017266 Sobic003G128575 Sobic003G128575 Sobic003G089700--Sobic003G128575 Sobic005G183450 Sobic005G183450 Sobic003G089700--Sobic005G183450 Sobic006G124850 Sobic006G124850 Sobic003G089700--Sobic006G124850 Sobic006G020350 Sobic006G020350 Sobic003G089700--Sobic006G020350 Sobic005G008101 Sobic005G008101 Sobic003G089700--Sobic005G008101 Sobic005G093600 Sobic005G093600 Sobic003G089700--Sobic005G093600 Sobic002G025000 Sobic002G025000 Sobic003G339800--Sobic002G025000 Sobic003G339800--Sobic009G111800 Sobic003G097701 Sobic003G097701 Sobic003G339800--Sobic003G097701 Sobic007G149750 Sobic007G149750 Sobic003G339800--Sobic007G149750 Sobic005G166900 Sobic005G166900 Sobic003G339800--Sobic005G166900 Sobic006G121600 Sobic006G121600 Sobic003G339800--Sobic006G121600 Sobic007G141300 Sobic007G141300 Sobic003G339800--Sobic007G141300 Sobic003G339800--Sobic010G107901 Sobic003G339800--Sobic003G172450 Sobic001G321700 Sobic001G321700 Sobic001G542600--Sobic001G321700 Sobic004G242900 Sobic004G242900 Sobic001G542600--Sobic004G242900 Sobic002G257150 Sobic002G257150 Sobic001G542600--Sobic002G257150 Sobic001G494200 Sobic001G494200 Sobic001G542600--Sobic001G494200 Sobic010G065001 Sobic010G065001 Sobic001G542600--Sobic010G065001 Sobic001G144001 Sobic001G144001 Sobic001G542600--Sobic001G144001 Sobic001G213832 Sobic001G213832 Sobic001G542600--Sobic001G213832 Sobic005G068200 Sobic005G068200 Sobic001G542600--Sobic005G068200 Sobic006G073300 Sobic006G073300 Sobic001G542600--Sobic006G073300 Sobic009G111800--Sobic002G025000 Sobic009G111800--Sobic004G109100 Sobic004G106200 Sobic004G106200 Sobic009G111800--Sobic004G106200 Sobic009G111800--Sobic001G321700 Sobic009G111800--Sobic005G008101 Sobic009G111800--Sobic007G149750 Sobic010G091100 Sobic010G091100 Sobic009G111800--Sobic010G091100 Sobic003G325000 Sobic003G325000 Sobic009G111800--Sobic003G325000 Sobic009G111800--Sobic004G138400 Sobic009G069450 Sobic009G069450 Sobic004G197700--Sobic009G069450 Sobic003G079725 Sobic003G079725 Sobic004G197700--Sobic003G079725 Sobic004G197700--Sobic003G097701 Sobic004G197700--Sobic003G089700 Sobic004G197700--Sobic005G068300 Sobic007G004750 Sobic007G004750 Sobic004G197700--Sobic007G004750 Sobic004G197700--Sobic001G249900 Sobic004G197700--Sobic008G157700 Sobic006G078450 Sobic006G078450 Sobic004G197700--Sobic006G078450 Sobic010G162200 Sobic010G162200 Sobic001G176700--Sobic010G162200 Sobic003G285600 Sobic003G285600 Sobic001G176700--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G176700--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic001G176700--Sobic010G162500 Sobic001G176700--Sobic004G197700 Sobic010G006300 Sobic010G006300 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic001G242700--Sobic008G157700 Sobic006G143800 Sobic006G143800 Sobic001G242700--Sobic006G143800 Sobic003G119750 Sobic003G119750 Sobic001G242700--Sobic003G119750 Sobic003G354166 Sobic003G354166 Sobic001G242700--Sobic003G354166 Sobic001G242700--Sobic007G004750 Sobic001G242700--Sobic005G008101 Sobic001G293900 Sobic001G293900 Sobic001G242700--Sobic001G293900 Sobic003G200400 Sobic003G200400 Sobic001G242700--Sobic003G200400 Sobic002G394433 Sobic002G394433 Sobic001G242700--Sobic002G394433
Octagon: transcription factors


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