Gene annotation
Transcriptome id Sobic.010G066100.1
Synonym ENP, MAB4, Sb10g005710, NPY1
Functional annotation BTBN14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
UniProt C5Z5J0
Pfam PF00651 PF03000
Panther DB PTHR32370 PTHR32370:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G31820 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os06g08550.1 : BTBN14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
MaizeGDB (Corn) Zm00025a049768
Brachypodium PNT76347 , KQK19264
Barley HORVU7Hr1G030460.4 , HORVU7Hr1G030460.5 , HORVU7Hr1G030460.6 , HORVU7Hr1G030460.7 , HORVU7Hr1G030460.1 , HORVU7Hr1G030460.2 , HORVU7Hr1G030460.3 , HORVU7Hr1G030460.8 , HORVU7Hr1G030460.9 , HORVU5Hr1G032660.6 , HORVU5Hr1G032660.4 , HORVU5Hr1G032660.5 , HORVU5Hr1G032660.2 , HORVU5Hr1G032660.3 , HORVU5Hr1G032660.1 , HORVU7Hr1G097110.6 , HORVU7Hr1G097110.5 , HORVU6Hr1G022500.1 , HORVU6Hr1G022500.2 , HORVU1Hr1G034650.5 , HORVU1Hr1G034650.4 , HORVU1Hr1G034650.7 , HORVU1Hr1G034650.6 , HORVU1Hr1G034650.1 , HORVU1Hr1G034650.3 , HORVU1Hr1G034650.2
Wheat TraesCS7D02G150700 , TraesCS7D02G150700 , TraesCS7A02G149100 , TraesCS7B02G052800 , TraesCS7B02G052800 , TraesCS7B02G052800 , TraesCS7A02G149100 , TraesCS7A02G149100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G089266 - -
2 Sobic.002G363433 - -
3 Sobic.007G001700 ATOFP18/OFP18, putative, expressed -
4 Sobic.005G131500 - -
5 Sobic.009G204700 light repressible receptor protein kinase, putative, expressed -
6 Sobic.004G093800 integral membrane protein, putative, expressed -
7 Sobic.009G253900 - -
8 Sobic.010G229025 - -
9 Sobic.010G127901 - -
10 Sobic.003G433000 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.010G174900 S-locus-like receptor protein kinase, putative, expressed -
12 Sobic.009G216200 - -
13 Sobic.002G307500 MATH domain containing protein, expressed -
14 Sobic.002G348300 expressed protein -
15 Sobic.009G189600 - -
16 Sobic.005G004900 PMR5, putative, expressed -
17 Sobic.003G440200 expressed protein -
18 Sobic.001G489400 3-dehydroquinate synthase, putative, expressed -
19 Sobic.004G173300 expressed protein -
20 Sobic.006G192900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1


Gene co-expression network
sample Sobic010G066100 Sobic010G066100 Sobic006G089266 Sobic006G089266 Sobic010G066100--Sobic006G089266 Sobic002G363433 Sobic002G363433 Sobic010G066100--Sobic002G363433 Sobic007G001700 Sobic007G001700 Sobic010G066100--Sobic007G001700 Sobic005G131500 Sobic005G131500 Sobic010G066100--Sobic005G131500 Sobic009G204700 Sobic009G204700 Sobic010G066100--Sobic009G204700 Sobic004G093800 Sobic004G093800 Sobic010G066100--Sobic004G093800 Sobic009G253900 Sobic009G253900 Sobic010G066100--Sobic009G253900 Sobic010G229025 Sobic010G229025 Sobic010G066100--Sobic010G229025 Sobic010G127901 Sobic010G127901 Sobic010G066100--Sobic010G127901 Sobic006G089266--Sobic009G253900 Sobic006G089266--Sobic005G131500 Sobic004G173300 Sobic004G173300 Sobic006G089266--Sobic004G173300 Sobic006G089266--Sobic004G093800 Sobic006G089266--Sobic007G001700 Sobic005G218300 Sobic005G218300 Sobic006G089266--Sobic005G218300 Sobic002G377501 Sobic002G377501 Sobic006G089266--Sobic002G377501 Sobic009G216200 Sobic009G216200 Sobic006G089266--Sobic009G216200 Sobic002G307500 Sobic002G307500 Sobic006G089266--Sobic002G307500 Sobic002G363433--Sobic006G089266 Sobic002G363433--Sobic010G066100 Sobic002G363433--Sobic005G131500 Sobic001G419300 Sobic001G419300 Sobic002G363433--Sobic001G419300 Sobic006G085601 Sobic006G085601 Sobic002G363433--Sobic006G085601 Sobic002G363433--Sobic009G253900 Sobic002G363433--Sobic004G093800 Sobic002G345900 Sobic002G345900 Sobic002G363433--Sobic002G345900 Sobic003G433000 Sobic003G433000 Sobic002G363433--Sobic003G433000 Sobic006G192900 Sobic006G192900 Sobic007G001700--Sobic006G192900 Sobic007G001700--Sobic004G173300 Sobic007G001700--Sobic004G093800 Sobic007G001700--Sobic002G307500 Sobic007G001700--Sobic006G089266 Sobic010G002600 Sobic010G002600 Sobic007G001700--Sobic010G002600 Sobic006G009200 Sobic006G009200 Sobic007G001700--Sobic006G009200 Sobic007G001700--Sobic009G253900 Sobic004G181400 Sobic004G181400 Sobic007G001700--Sobic004G181400 Sobic005G131500--Sobic006G089266 Sobic005G131500--Sobic006G085601 Sobic005G131500--Sobic004G093800 Sobic005G131500--Sobic004G173300 Sobic003G068100 Sobic003G068100 Sobic005G131500--Sobic003G068100 Sobic005G131500--Sobic009G216200 Sobic008G142500 Sobic008G142500 Sobic005G131500--Sobic008G142500 Sobic005G131500--Sobic002G307500 Sobic004G267400 Sobic004G267400 Sobic005G131500--Sobic004G267400 Sobic009G204700--Sobic004G267400 Sobic003G069601 Sobic003G069601 Sobic009G204700--Sobic003G069601 Sobic006G045601 Sobic006G045601 Sobic009G204700--Sobic006G045601 Sobic001G100300 Sobic001G100300 Sobic009G204700--Sobic001G100300 Sobic009G204700--Sobic009G216200 Sobic009G173700 Sobic009G173700 Sobic009G204700--Sobic009G173700 Sobic009G204700--Sobic003G433000 Sobic002G374000 Sobic002G374000 Sobic009G204700--Sobic002G374000 Sobic009G235400 Sobic009G235400 Sobic009G204700--Sobic009G235400 Sobic004G093800--Sobic002G307500 Sobic001G489400 Sobic001G489400 Sobic004G093800--Sobic001G489400 Sobic009G199401 Sobic009G199401 Sobic004G093800--Sobic009G199401 Sobic004G093800--Sobic004G173300 Sobic004G093800--Sobic010G002600 Sobic004G093800--Sobic008G142500 Sobic004G093800--Sobic010G229025 Sobic004G093800--Sobic006G192900 Sobic004G093800--Sobic005G131500 Sobic009G253900--Sobic006G089266 Sobic009G253900--Sobic005G218300 Sobic010G054700 Sobic010G054700 Sobic009G253900--Sobic010G054700 Sobic009G253900--Sobic004G173300 Sobic009G253900--Sobic002G377501 Sobic009G253900--Sobic002G307500 Sobic009G253900--Sobic005G131500 Sobic004G347000 Sobic004G347000 Sobic009G253900--Sobic004G347000 Sobic009G253900--Sobic004G093800 Sobic010G229025--Sobic009G199401 Sobic010G229025--Sobic001G489400 Sobic002G421100 Sobic002G421100 Sobic010G229025--Sobic002G421100 Sobic010G229025--Sobic004G093800 Sobic001G183550 Sobic001G183550 Sobic010G229025--Sobic001G183550 Sobic010G229025--Sobic002G307500 Sobic003G162600 Sobic003G162600 Sobic010G229025--Sobic003G162600 Sobic009G025750 Sobic009G025750 Sobic010G229025--Sobic009G025750 Sobic006G083050 Sobic006G083050 Sobic010G229025--Sobic006G083050 Sobic010G127901--Sobic006G083050 Sobic003G270650 Sobic003G270650 Sobic010G127901--Sobic003G270650 Sobic001G065150 Sobic001G065150 Sobic010G127901--Sobic001G065150 Sobic005G116800 Sobic005G116800 Sobic010G127901--Sobic005G116800 Sobic007G151250 Sobic007G151250 Sobic010G127901--Sobic007G151250 Sobic010G127901--Sobic009G025750 Sobic010G127901--Sobic010G229025 Sobic009G045400 Sobic009G045400 Sobic010G127901--Sobic009G045400 Sobic005G165300 Sobic005G165300 Sobic010G127901--Sobic005G165300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.