Gene annotation
Transcriptome id Sobic.010G074700.2
Synonym HAL3A, HAL3, ATHAL3, ATHAL3A
Functional annotation phosphopantothenoylcysteine decarboxylase, putative, expressed
UniProt A0A1W0VRU5
Pfam PF02441
Panther DB PTHR14359
NCBI CDD KOG0672; Halotolerance protein HAL3 (contains flavoprotein domain)
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT3G18030 : HAL3-like protein A
RAP-DB (Rice) LOC_Os06g09910.2 : phosphopantothenoylcysteine decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a000808
Brachypodium -
Barley HORVU7Hr1G034130.2 , HORVU7Hr1G034130.3 , HORVU7Hr1G034130.4 , HORVU7Hr1G034130.5
Wheat TraesCS7A02G162200 , TraesCS7D02G163900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
2 Sobic.003G204000 expressed protein -
3 Sobic.004G112500 - -
4 Sobic.004G118700 cbxX, chromosomal, putative, expressed -
5 Sobic.005G117901 - -
6 Sobic.005G130450 - -
7 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.001G243901 - -
9 Sobic.008G167300 NBS-LRR disease resistance protein, putative, expressed -
10 Sobic.004G096200 - -
11 Sobic.002G150766 - -
12 Sobic.004G016500 PPR repeat domain containing protein, putative, expressed -
13 Sobic.003G315332 - K15421: secretion-regulating guanine nucleotide exchange factor
14 Sobic.004G164600 - -
15 Sobic.008G101350 - -
16 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
17 Sobic.001G515600 expressed protein -
18 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
19 Sobic.010G146700 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
20 Sobic.004G212800 - -


Gene co-expression network
sample Sobic010G074700 Sobic010G074700 Sobic001G024200 Sobic001G024200 Sobic010G074700--Sobic001G024200 Sobic003G204000 Sobic003G204000 Sobic010G074700--Sobic003G204000 Sobic004G112500 Sobic004G112500 Sobic010G074700--Sobic004G112500 Sobic004G118700 Sobic004G118700 Sobic010G074700--Sobic004G118700 Sobic005G117901 Sobic005G117901 Sobic010G074700--Sobic005G117901 Sobic005G130450 Sobic005G130450 Sobic010G074700--Sobic005G130450 Sobic007G211000 Sobic007G211000 Sobic010G074700--Sobic007G211000 Sobic001G243901 Sobic001G243901 Sobic010G074700--Sobic001G243901 Sobic008G167300 Sobic008G167300 Sobic010G074700--Sobic008G167300 Sobic004G212800 Sobic004G212800 Sobic001G024200--Sobic004G212800 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic001G024200--Sobic003G204000 Sobic001G272000 Sobic001G272000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic010G248200 Sobic010G248200 Sobic001G024200--Sobic010G248200 Sobic003G204000--Sobic001G024200 Sobic008G068800 Sobic008G068800 Sobic003G204000--Sobic008G068800 Sobic003G204000--Sobic004G212800 Sobic008G116500 Sobic008G116500 Sobic003G204000--Sobic008G116500 Sobic004G169501 Sobic004G169501 Sobic003G204000--Sobic004G169501 Sobic001G543900 Sobic001G543900 Sobic003G204000--Sobic001G543900 Sobic003G204000--Sobic004G112500 Sobic002G297800 Sobic002G297800 Sobic003G204000--Sobic002G297800 Sobic003G315332 Sobic003G315332 Sobic003G204000--Sobic003G315332 Sobic004G112500--Sobic001G024200 Sobic004G112500--Sobic004G212800 Sobic004G112500--Sobic007G211000 Sobic004G112500--Sobic001G543900 Sobic004G112500--Sobic004G164600 Sobic004G112500--Sobic010G248200 Sobic010G124001 Sobic010G124001 Sobic004G112500--Sobic010G124001 Sobic008G157950 Sobic008G157950 Sobic004G112500--Sobic008G157950 Sobic008G042250 Sobic008G042250 Sobic004G112500--Sobic008G042250 Sobic004G118700--Sobic001G024200 Sobic004G118700--Sobic008G068800 Sobic004G118700--Sobic004G212800 Sobic010G074500 Sobic010G074500 Sobic004G118700--Sobic010G074500 Sobic002G283300 Sobic002G283300 Sobic004G118700--Sobic002G283300 Sobic003G044900 Sobic003G044900 Sobic004G118700--Sobic003G044900 Sobic004G016500 Sobic004G016500 Sobic004G118700--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic004G118700--Sobic001G046600 Sobic003G424100 Sobic003G424100 Sobic004G118700--Sobic003G424100 Sobic005G117901--Sobic001G243901 Sobic008G101350 Sobic008G101350 Sobic005G117901--Sobic008G101350 Sobic004G096200 Sobic004G096200 Sobic005G117901--Sobic004G096200 Sobic005G117901--Sobic005G130450 Sobic004G279300 Sobic004G279300 Sobic005G117901--Sobic004G279300 Sobic001G515600 Sobic001G515600 Sobic005G117901--Sobic001G515600 Sobic005G117901--Sobic007G211000 Sobic002G048300 Sobic002G048300 Sobic005G117901--Sobic002G048300 Sobic005G130450--Sobic005G117901 Sobic005G130450--Sobic004G096200 Sobic005G130450--Sobic001G515600 Sobic005G130450--Sobic008G101350 Sobic005G130450--Sobic004G279300 Sobic005G130450--Sobic001G243901 Sobic005G130450--Sobic007G211000 Sobic003G121400 Sobic003G121400 Sobic005G130450--Sobic003G121400 Sobic005G130450--Sobic004G112500 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic007G211000--Sobic001G272000 Sobic007G211000--Sobic001G243901 Sobic007G211000--Sobic005G117901 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic001G243901--Sobic005G117901 Sobic001G243901--Sobic008G101350 Sobic001G345333 Sobic001G345333 Sobic001G243901--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic001G243901--Sobic002G007250 Sobic001G243901--Sobic010G248200 Sobic001G243901--Sobic004G096200 Sobic010G218500 Sobic010G218500 Sobic001G243901--Sobic010G218500 Sobic003G302701 Sobic003G302701 Sobic001G243901--Sobic003G302701 Sobic001G243901--Sobic007G211000 Sobic008G167300--Sobic004G212800 Sobic008G167300--Sobic004G016500 Sobic008G167300--Sobic001G046600 Sobic008G167300--Sobic001G024200 Sobic008G161401 Sobic008G161401 Sobic008G167300--Sobic008G161401 Sobic008G167300--Sobic004G164600 Sobic008G167300--Sobic004G112500 Sobic008G167300--Sobic002G007250 Sobic008G167300--Sobic003G424100
Octagon: transcription factors


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