Gene annotation
Transcriptome id Sobic.010G143100.1
Synonym
Functional annotation -
UniProt A0A194YKA2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
2 Sobic.004G140600 exonuclease, putative, expressed K13288: orn, REX2, oligoribonuclease
3 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
4 Sobic.002G180666 - -
5 Sobic.001G261492 - -
6 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
7 Sobic.002G343901 - -
8 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
9 Sobic.006G032500 - -
10 Sobic.010G123600 WW domain containing protein, expressed -
11 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
12 Sobic.009G024400 ZOS5-03 - C2H2 zinc finger protein, expressed K09191: general transcription factor IIIA
13 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
14 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
15 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
16 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
17 Sobic.001G455600 cysteine synthase, putative, expressed K01738: cysteine synthase
18 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
19 Sobic.003G170900 - -
20 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30


Gene co-expression network
sample Sobic010G143100 Sobic010G143100 Sobic001G227200 Sobic001G227200 Sobic010G143100--Sobic001G227200 Sobic004G140600 Sobic004G140600 Sobic010G143100--Sobic004G140600 Sobic001G461400 Sobic001G461400 Sobic010G143100--Sobic001G461400 Sobic002G180666 Sobic002G180666 Sobic010G143100--Sobic002G180666 Sobic001G261492 Sobic001G261492 Sobic010G143100--Sobic001G261492 Sobic001G311500 Sobic001G311500 Sobic010G143100--Sobic001G311500 Sobic002G343901 Sobic002G343901 Sobic010G143100--Sobic002G343901 Sobic005G112300 Sobic005G112300 Sobic010G143100--Sobic005G112300 Sobic006G032500 Sobic006G032500 Sobic010G143100--Sobic006G032500 Sobic001G227200--Sobic004G140600 Sobic009G177500 Sobic009G177500 Sobic001G227200--Sobic009G177500 Sobic005G106500 Sobic005G106500 Sobic001G227200--Sobic005G106500 Sobic010G139000 Sobic010G139000 Sobic001G227200--Sobic010G139000 Sobic001G227200--Sobic002G343901 Sobic004G258700 Sobic004G258700 Sobic001G227200--Sobic004G258700 Sobic001G227200--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic001G227200--Sobic001G036050 Sobic001G456900 Sobic001G456900 Sobic001G227200--Sobic001G456900 Sobic004G140600--Sobic001G227200 Sobic004G140600--Sobic009G177500 Sobic008G063300 Sobic008G063300 Sobic004G140600--Sobic008G063300 Sobic009G132700 Sobic009G132700 Sobic004G140600--Sobic009G132700 Sobic001G455600 Sobic001G455600 Sobic004G140600--Sobic001G455600 Sobic004G140600--Sobic010G139000 Sobic004G140600--Sobic002G343901 Sobic001G219600 Sobic001G219600 Sobic004G140600--Sobic001G219600 Sobic001G433800 Sobic001G433800 Sobic004G140600--Sobic001G433800 Sobic001G063700 Sobic001G063700 Sobic001G461400--Sobic001G063700 Sobic003G416700 Sobic003G416700 Sobic001G461400--Sobic003G416700 Sobic002G264200 Sobic002G264200 Sobic001G461400--Sobic002G264200 Sobic002G154000 Sobic002G154000 Sobic001G461400--Sobic002G154000 Sobic001G087600 Sobic001G087600 Sobic001G461400--Sobic001G087600 Sobic005G200800 Sobic005G200800 Sobic001G461400--Sobic005G200800 Sobic003G360400 Sobic003G360400 Sobic001G461400--Sobic003G360400 Sobic002G071500 Sobic002G071500 Sobic001G461400--Sobic002G071500 Sobic010G112100 Sobic010G112100 Sobic001G461400--Sobic010G112100 Sobic003G148000 Sobic003G148000 Sobic002G180666--Sobic003G148000 Sobic002G180666--Sobic006G032500 Sobic002G145101 Sobic002G145101 Sobic002G180666--Sobic002G145101 Sobic006G048500 Sobic006G048500 Sobic002G180666--Sobic006G048500 Sobic002G180666--Sobic002G343901 Sobic003G372700 Sobic003G372700 Sobic002G180666--Sobic003G372700 Sobic004G007100 Sobic004G007100 Sobic002G180666--Sobic004G007100 Sobic007G161300 Sobic007G161300 Sobic002G180666--Sobic007G161300 Sobic002G180666--Sobic001G456900 Sobic004G158400 Sobic004G158400 Sobic001G261492--Sobic004G158400 Sobic005G167700 Sobic005G167700 Sobic001G261492--Sobic005G167700 Sobic001G261492--Sobic005G112300 Sobic001G261492--Sobic009G132700 Sobic001G261492--Sobic001G227200 Sobic001G261492--Sobic010G143100 Sobic003G170900 Sobic003G170900 Sobic001G261492--Sobic003G170900 Sobic010G123600 Sobic010G123600 Sobic001G261492--Sobic010G123600 Sobic001G261492--Sobic010G139000 Sobic001G311500--Sobic010G139000 Sobic009G247400 Sobic009G247400 Sobic001G311500--Sobic009G247400 Sobic001G311500--Sobic005G112300 Sobic003G059750 Sobic003G059750 Sobic001G311500--Sobic003G059750 Sobic008G009700 Sobic008G009700 Sobic001G311500--Sobic008G009700 Sobic004G314000 Sobic004G314000 Sobic001G311500--Sobic004G314000 Sobic010G279450 Sobic010G279450 Sobic001G311500--Sobic010G279450 Sobic008G028700 Sobic008G028700 Sobic001G311500--Sobic008G028700 Sobic001G363500 Sobic001G363500 Sobic001G311500--Sobic001G363500 Sobic002G343901--Sobic002G180666 Sobic006G216800 Sobic006G216800 Sobic002G343901--Sobic006G216800 Sobic002G343901--Sobic009G177500 Sobic002G343901--Sobic003G148000 Sobic002G343901--Sobic001G227200 Sobic008G162900 Sobic008G162900 Sobic002G343901--Sobic008G162900 Sobic002G343901--Sobic004G140600 Sobic002G133400 Sobic002G133400 Sobic002G343901--Sobic002G133400 Sobic002G343901--Sobic005G112300 Sobic005G112300--Sobic001G363500 Sobic007G062800 Sobic007G062800 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic001G540400 Sobic001G540400 Sobic005G112300--Sobic001G540400 Sobic010G010700 Sobic010G010700 Sobic005G112300--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic005G112300--Sobic005G008800 Sobic005G112300--Sobic002G071500 Sobic006G032500--Sobic002G180666 Sobic006G032500--Sobic003G372700 Sobic006G032500--Sobic003G148000 Sobic006G032500--Sobic003G059750 Sobic006G032500--Sobic002G145101 Sobic006G032500--Sobic007G161300 Sobic006G032500--Sobic005G112300 Sobic006G032500--Sobic010G139000 Sobic008G084700 Sobic008G084700 Sobic006G032500--Sobic008G084700
Octagon: transcription factors


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