Gene annotation
Transcriptome id Sobic.010G150700.1,Sobic.010G150700.2
Synonym PAB8, PABP8
Functional annotation polyadenylate-binding protein, putative, expressed
UniProt A0A194YJE1
Pfam PF00658
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003723; RNA binding


Orthologs (automatic annotation)
TAIR AT1G49760 : poly(A) binding protein 8
RAP-DB (Rice) LOC_Os09g02700.1 : polyadenylate-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a046145
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G244200 nucleolar GTP-binding protein 1, putative, expressed -
2 Sobic.003G160100 - -
3 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
4 Sobic.005G095000 -(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
5 Sobic.004G086150 - -
6 Sobic.010G033100 - -
7 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
8 Sobic.009G248801 - -
9 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
10 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
11 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
12 Sobic.001G133000 expressed protein -
13 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
14 Sobic.001G540600 expressed protein -
15 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
16 Sobic.004G006800 expressed protein -
17 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
20 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic010G150700 Sobic010G150700 Sobic002G244200 Sobic002G244200 Sobic010G150700--Sobic002G244200 Sobic003G160100 Sobic003G160100 Sobic010G150700--Sobic003G160100 Sobic007G133000 Sobic007G133000 Sobic010G150700--Sobic007G133000 Sobic005G095000 Sobic005G095000 Sobic010G150700--Sobic005G095000 Sobic004G086150 Sobic004G086150 Sobic010G150700--Sobic004G086150 Sobic010G033100 Sobic010G033100 Sobic010G150700--Sobic010G033100 Sobic005G068700 Sobic005G068700 Sobic010G150700--Sobic005G068700 Sobic009G248801 Sobic009G248801 Sobic010G150700--Sobic009G248801 Sobic003G073800 Sobic003G073800 Sobic010G150700--Sobic003G073800 Sobic002G244200--Sobic009G248801 Sobic002G244200--Sobic005G095000 Sobic008G166550 Sobic008G166550 Sobic002G244200--Sobic008G166550 Sobic007G090403 Sobic007G090403 Sobic002G244200--Sobic007G090403 Sobic002G244200--Sobic007G133000 Sobic002G244200--Sobic003G160100 Sobic002G244200--Sobic004G086150 Sobic007G202300 Sobic007G202300 Sobic002G244200--Sobic007G202300 Sobic003G416000 Sobic003G416000 Sobic002G244200--Sobic003G416000 Sobic003G160100--Sobic005G095000 Sobic003G160100--Sobic004G086150 Sobic004G006800 Sobic004G006800 Sobic003G160100--Sobic004G006800 Sobic003G160100--Sobic009G248801 Sobic003G160100--Sobic002G244200 Sobic002G379750 Sobic002G379750 Sobic003G160100--Sobic002G379750 Sobic003G160100--Sobic007G090403 Sobic005G133600 Sobic005G133600 Sobic003G160100--Sobic005G133600 Sobic003G160100--Sobic007G133000 Sobic010G231300 Sobic010G231300 Sobic007G133000--Sobic010G231300 Sobic001G217900 Sobic001G217900 Sobic007G133000--Sobic001G217900 Sobic001G263100 Sobic001G263100 Sobic007G133000--Sobic001G263100 Sobic010G125833 Sobic010G125833 Sobic007G133000--Sobic010G125833 Sobic007G133000--Sobic005G068700 Sobic001G540600 Sobic001G540600 Sobic007G133000--Sobic001G540600 Sobic002G206300 Sobic002G206300 Sobic007G133000--Sobic002G206300 Sobic001G180200 Sobic001G180200 Sobic007G133000--Sobic001G180200 Sobic006G235400 Sobic006G235400 Sobic007G133000--Sobic006G235400 Sobic009G194500 Sobic009G194500 Sobic005G095000--Sobic009G194500 Sobic010G131700 Sobic010G131700 Sobic005G095000--Sobic010G131700 Sobic005G095000--Sobic003G160100 Sobic002G119100 Sobic002G119100 Sobic005G095000--Sobic002G119100 Sobic006G235300 Sobic006G235300 Sobic005G095000--Sobic006G235300 Sobic005G095000--Sobic002G244200 Sobic004G127800 Sobic004G127800 Sobic005G095000--Sobic004G127800 Sobic009G100700 Sobic009G100700 Sobic005G095000--Sobic009G100700 Sobic005G095000--Sobic004G086150 Sobic004G086150--Sobic009G248801 Sobic004G086150--Sobic003G160100 Sobic004G086150--Sobic002G244200 Sobic004G086150--Sobic005G095000 Sobic002G196600 Sobic002G196600 Sobic004G086150--Sobic002G196600 Sobic004G086150--Sobic005G068700 Sobic009G123900 Sobic009G123900 Sobic004G086150--Sobic009G123900 Sobic004G086150--Sobic007G090403 Sobic004G175400 Sobic004G175400 Sobic004G086150--Sobic004G175400 Sobic006G145800 Sobic006G145800 Sobic010G033100--Sobic006G145800 Sobic010G057666 Sobic010G057666 Sobic010G033100--Sobic010G057666 Sobic010G033100--Sobic005G095000 Sobic004G038800 Sobic004G038800 Sobic010G033100--Sobic004G038800 Sobic010G033100--Sobic010G131700 Sobic007G198400 Sobic007G198400 Sobic010G033100--Sobic007G198400 Sobic010G033100--Sobic003G160100 Sobic010G033100--Sobic010G150700 Sobic010G033100--Sobic002G244200 Sobic001G258200 Sobic001G258200 Sobic005G068700--Sobic001G258200 Sobic005G101200 Sobic005G101200 Sobic005G068700--Sobic005G101200 Sobic003G185900 Sobic003G185900 Sobic005G068700--Sobic003G185900 Sobic002G056500 Sobic002G056500 Sobic005G068700--Sobic002G056500 Sobic008G129900 Sobic008G129900 Sobic005G068700--Sobic008G129900 Sobic008G033000 Sobic008G033000 Sobic005G068700--Sobic008G033000 Sobic005G068700--Sobic001G217900 Sobic002G390100 Sobic002G390100 Sobic005G068700--Sobic002G390100 Sobic005G068700--Sobic002G206300 Sobic009G248801--Sobic004G086150 Sobic009G248801--Sobic002G244200 Sobic009G248801--Sobic003G160100 Sobic009G248801--Sobic005G095000 Sobic009G248801--Sobic007G202300 Sobic009G248801--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic009G248801--Sobic008G101100 Sobic009G248801--Sobic007G090403 Sobic009G248801--Sobic008G166550 Sobic001G378100 Sobic001G378100 Sobic003G073800--Sobic001G378100 Sobic001G077300 Sobic001G077300 Sobic003G073800--Sobic001G077300 Sobic003G073800--Sobic001G180200 Sobic009G207900 Sobic009G207900 Sobic003G073800--Sobic009G207900 Sobic001G536700 Sobic001G536700 Sobic003G073800--Sobic001G536700 Sobic009G073900 Sobic009G073900 Sobic003G073800--Sobic009G073900 Sobic006G090100 Sobic006G090100 Sobic003G073800--Sobic006G090100 Sobic007G058100 Sobic007G058100 Sobic003G073800--Sobic007G058100 Sobic003G073800--Sobic002G206300
Octagon: transcription factors


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