Gene annotation
Transcriptome id Sobic.010G159400.1
Synonym Sb10g021160, CAT8
Functional annotation amino acid permease family protein, putative, expressed
UniProt C5Z430
Pfam PF13906 PF00324
Panther DB PTHR11785 PTHR11785:SF273
NCBI CDD KOG1286; Amino acid transporters
KEGG Orthology K03294; basic amino acid/polyamine antiporter, APA family
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT1G17120 : cationic amino acid transporter 8
RAP-DB (Rice) LOC_Os06g34830.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a042351
Brachypodium KQK18147
Barley HORVU2Hr1G099530.1 , HORVU4Hr1G015980.1 , HORVU2Hr1G099610.2 , HORVU2Hr1G099610.1 , HORVU2Hr1G099530.4 , HORVU2Hr1G099530.5 , HORVU2Hr1G099530.2 , HORVU2Hr1G099530.3 , HORVU5Hr1G071780.1 , HORVU5Hr1G071780.2 , HORVU5Hr1G071780.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G319300 lipase class 3 family protein, putative, expressed -
2 Sobic.002G417500 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
3 Sobic.006G102500 transporter family protein, putative, expressed -
4 Sobic.010G000300 transmembrane BAX inhibitor motif-containing protein, putative, expressed -
5 Sobic.009G037800 phosphoglycerate mutase, putative, expressed -
6 Sobic.009G149200 - -
7 Sobic.007G124100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
8 Sobic.006G213601 - -
9 Sobic.004G331800 alginate regulatory protein AlgP, putative, expressed -
10 Sobic.001G310700 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
11 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
12 Sobic.003G333900 pentatricopeptide repeat-containing protein, putative, expressed -
13 Sobic.003G361500 zinc finger family protein, putative, expressed -
14 Sobic.010G071600 PTF1, putative, expressed -
15 Sobic.001G034300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
16 Sobic.004G291000 scarecrow, putative, expressed -
17 Sobic.004G281300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
18 Sobic.003G422700 amino acid permease family protein, putative, expressed -
19 Sobic.006G251000 STE_MEKK_ste11_MAP3K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1


Gene co-expression network
sample Sobic010G159400 Sobic010G159400 Sobic004G319300 Sobic004G319300 Sobic010G159400--Sobic004G319300 Sobic002G417500 Sobic002G417500 Sobic010G159400--Sobic002G417500 Sobic006G102500 Sobic006G102500 Sobic010G159400--Sobic006G102500 Sobic010G000300 Sobic010G000300 Sobic010G159400--Sobic010G000300 Sobic009G037800 Sobic009G037800 Sobic010G159400--Sobic009G037800 Sobic009G149200 Sobic009G149200 Sobic010G159400--Sobic009G149200 Sobic007G124100 Sobic007G124100 Sobic010G159400--Sobic007G124100 Sobic006G213601 Sobic006G213601 Sobic010G159400--Sobic006G213601 Sobic004G331800 Sobic004G331800 Sobic010G159400--Sobic004G331800 Sobic003G361500 Sobic003G361500 Sobic004G319300--Sobic003G361500 Sobic001G015800 Sobic001G015800 Sobic004G319300--Sobic001G015800 Sobic004G091200 Sobic004G091200 Sobic004G319300--Sobic004G091200 Sobic009G101300 Sobic009G101300 Sobic004G319300--Sobic009G101300 Sobic003G038600 Sobic003G038600 Sobic004G319300--Sobic003G038600 Sobic002G134600 Sobic002G134600 Sobic004G319300--Sobic002G134600 Sobic001G503400 Sobic001G503400 Sobic004G319300--Sobic001G503400 Sobic010G130000 Sobic010G130000 Sobic004G319300--Sobic010G130000 Sobic007G006900 Sobic007G006900 Sobic004G319300--Sobic007G006900 Sobic002G184600 Sobic002G184600 Sobic002G417500--Sobic002G184600 Sobic002G417500--Sobic004G331800 Sobic003G422700 Sobic003G422700 Sobic002G417500--Sobic003G422700 Sobic003G424400 Sobic003G424400 Sobic002G417500--Sobic003G424400 Sobic010G265800 Sobic010G265800 Sobic002G417500--Sobic010G265800 Sobic006G197800 Sobic006G197800 Sobic002G417500--Sobic006G197800 Sobic003G290100 Sobic003G290100 Sobic002G417500--Sobic003G290100 Sobic002G417500--Sobic007G124100 Sobic009G028500 Sobic009G028500 Sobic002G417500--Sobic009G028500 Sobic003G184800 Sobic003G184800 Sobic006G102500--Sobic003G184800 Sobic006G220300 Sobic006G220300 Sobic006G102500--Sobic006G220300 Sobic003G002600 Sobic003G002600 Sobic006G102500--Sobic003G002600 Sobic001G037900 Sobic001G037900 Sobic006G102500--Sobic001G037900 Sobic003G372800 Sobic003G372800 Sobic006G102500--Sobic003G372800 Sobic002G359000 Sobic002G359000 Sobic006G102500--Sobic002G359000 Sobic001G438800 Sobic001G438800 Sobic006G102500--Sobic001G438800 Sobic006G220200 Sobic006G220200 Sobic006G102500--Sobic006G220200 Sobic010G092600 Sobic010G092600 Sobic006G102500--Sobic010G092600 Sobic007G166100 Sobic007G166100 Sobic010G000300--Sobic007G166100 Sobic001G218800 Sobic001G218800 Sobic010G000300--Sobic001G218800 Sobic010G037400 Sobic010G037400 Sobic010G000300--Sobic010G037400 Sobic002G347000 Sobic002G347000 Sobic010G000300--Sobic002G347000 Sobic003G123000 Sobic003G123000 Sobic010G000300--Sobic003G123000 Sobic001G114500 Sobic001G114500 Sobic010G000300--Sobic001G114500 Sobic003G071000 Sobic003G071000 Sobic010G000300--Sobic003G071000 Sobic003G273400 Sobic003G273400 Sobic010G000300--Sobic003G273400 Sobic009G049300 Sobic009G049300 Sobic010G000300--Sobic009G049300 Sobic010G233400 Sobic010G233400 Sobic009G037800--Sobic010G233400 Sobic007G011200 Sobic007G011200 Sobic009G037800--Sobic007G011200 Sobic007G140900 Sobic007G140900 Sobic009G037800--Sobic007G140900 Sobic002G068800 Sobic002G068800 Sobic009G037800--Sobic002G068800 Sobic001G316900 Sobic001G316900 Sobic009G037800--Sobic001G316900 Sobic001G370600 Sobic001G370600 Sobic009G037800--Sobic001G370600 Sobic006G210300 Sobic006G210300 Sobic009G037800--Sobic006G210300 Sobic002G197600 Sobic002G197600 Sobic009G037800--Sobic002G197600 Sobic001G157400 Sobic001G157400 Sobic009G037800--Sobic001G157400 Sobic009G149200--Sobic004G331800 Sobic004G018200 Sobic004G018200 Sobic009G149200--Sobic004G018200 Sobic002G280600 Sobic002G280600 Sobic009G149200--Sobic002G280600 Sobic004G227300 Sobic004G227300 Sobic009G149200--Sobic004G227300 Sobic001G039800 Sobic001G039800 Sobic009G149200--Sobic001G039800 Sobic009G156300 Sobic009G156300 Sobic009G149200--Sobic009G156300 Sobic003G299000 Sobic003G299000 Sobic009G149200--Sobic003G299000 Sobic001G110300 Sobic001G110300 Sobic009G149200--Sobic001G110300 Sobic001G285000 Sobic001G285000 Sobic009G149200--Sobic001G285000 Sobic002G207300 Sobic002G207300 Sobic007G124100--Sobic002G207300 Sobic007G139900 Sobic007G139900 Sobic007G124100--Sobic007G139900 Sobic001G118900 Sobic001G118900 Sobic007G124100--Sobic001G118900 Sobic002G367900 Sobic002G367900 Sobic007G124100--Sobic002G367900 Sobic001G161200 Sobic001G161200 Sobic007G124100--Sobic001G161200 Sobic004G065900 Sobic004G065900 Sobic007G124100--Sobic004G065900 Sobic007G124100--Sobic009G028500 Sobic004G176900 Sobic004G176900 Sobic007G124100--Sobic004G176900 Sobic003G131500 Sobic003G131500 Sobic007G124100--Sobic003G131500 Sobic004G332000 Sobic004G332000 Sobic006G213601--Sobic004G332000 Sobic002G119800 Sobic002G119800 Sobic006G213601--Sobic002G119800 Sobic009G059700 Sobic009G059700 Sobic006G213601--Sobic009G059700 Sobic002G400200 Sobic002G400200 Sobic006G213601--Sobic002G400200 Sobic006G194500 Sobic006G194500 Sobic006G213601--Sobic006G194500 Sobic003G119800 Sobic003G119800 Sobic006G213601--Sobic003G119800 Sobic006G213601--Sobic007G006900 Sobic006G225600 Sobic006G225600 Sobic006G213601--Sobic006G225600 Sobic004G267300 Sobic004G267300 Sobic006G213601--Sobic004G267300 Sobic003G369500 Sobic003G369500 Sobic004G331800--Sobic003G369500 Sobic004G331800--Sobic002G417500 Sobic004G086800 Sobic004G086800 Sobic004G331800--Sobic004G086800 Sobic004G331800--Sobic001G285000 Sobic002G138700 Sobic002G138700 Sobic004G331800--Sobic002G138700 Sobic001G410100 Sobic001G410100 Sobic004G331800--Sobic001G410100 Sobic004G331800--Sobic002G207300 Sobic004G331800--Sobic009G149200 Sobic003G425200 Sobic003G425200 Sobic004G331800--Sobic003G425200
Octagon: transcription factors


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