Gene annotation
Transcriptome id Sobic.009G149200.1
Synonym
Functional annotation -
UniProt C5YYB8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.009G149200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G331800 alginate regulatory protein AlgP, putative, expressed -
2 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
3 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
4 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
5 Sobic.001G039800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
7 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
8 Sobic.001G110300 fb27, putative, expressed -
9 Sobic.001G285000 - -
10 Sobic.010G000300 transmembrane BAX inhibitor motif-containing protein, putative, expressed -
11 Sobic.005G155800 actin polymerization factor, putative, expressed K05754: actin related protein 2/3 complex, subunit 5
12 Sobic.010G045833 - -
13 Sobic.001G408100 Yip1 domain containing protein, expressed -
14 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
15 Sobic.001G279200 PHLOEM 2-LIKE A10, putative, expressed -
16 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
17 Sobic.006G171700 - -
18 Sobic.003G359900 C2 domain containing protein, expressed -
19 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
20 Sobic.001G430800 GA17271-PA, putative, expressed -


Gene co-expression network
sample Sobic009G149200 Sobic009G149200 Sobic004G331800 Sobic004G331800 Sobic009G149200--Sobic004G331800 Sobic004G018200 Sobic004G018200 Sobic009G149200--Sobic004G018200 Sobic002G280600 Sobic002G280600 Sobic009G149200--Sobic002G280600 Sobic004G227300 Sobic004G227300 Sobic009G149200--Sobic004G227300 Sobic001G039800 Sobic001G039800 Sobic009G149200--Sobic001G039800 Sobic009G156300 Sobic009G156300 Sobic009G149200--Sobic009G156300 Sobic003G299000 Sobic003G299000 Sobic009G149200--Sobic003G299000 Sobic001G110300 Sobic001G110300 Sobic009G149200--Sobic001G110300 Sobic001G285000 Sobic001G285000 Sobic009G149200--Sobic001G285000 Sobic003G369500 Sobic003G369500 Sobic004G331800--Sobic003G369500 Sobic002G417500 Sobic002G417500 Sobic004G331800--Sobic002G417500 Sobic004G086800 Sobic004G086800 Sobic004G331800--Sobic004G086800 Sobic004G331800--Sobic001G285000 Sobic002G138700 Sobic002G138700 Sobic004G331800--Sobic002G138700 Sobic001G410100 Sobic001G410100 Sobic004G331800--Sobic001G410100 Sobic002G207300 Sobic002G207300 Sobic004G331800--Sobic002G207300 Sobic004G331800--Sobic009G149200 Sobic003G425200 Sobic003G425200 Sobic004G331800--Sobic003G425200 Sobic001G188700 Sobic001G188700 Sobic004G018200--Sobic001G188700 Sobic006G181700 Sobic006G181700 Sobic004G018200--Sobic006G181700 Sobic007G019501 Sobic007G019501 Sobic004G018200--Sobic007G019501 Sobic004G018200--Sobic009G156300 Sobic010G039000 Sobic010G039000 Sobic004G018200--Sobic010G039000 Sobic003G283300 Sobic003G283300 Sobic004G018200--Sobic003G283300 Sobic009G077100 Sobic009G077100 Sobic004G018200--Sobic009G077100 Sobic006G094500 Sobic006G094500 Sobic004G018200--Sobic006G094500 Sobic001G451901 Sobic001G451901 Sobic004G018200--Sobic001G451901 Sobic002G143900 Sobic002G143900 Sobic002G280600--Sobic002G143900 Sobic002G394800 Sobic002G394800 Sobic002G280600--Sobic002G394800 Sobic010G232900 Sobic010G232900 Sobic002G280600--Sobic010G232900 Sobic007G027700 Sobic007G027700 Sobic002G280600--Sobic007G027700 Sobic003G123000 Sobic003G123000 Sobic002G280600--Sobic003G123000 Sobic006G233300 Sobic006G233300 Sobic002G280600--Sobic006G233300 Sobic010G239800 Sobic010G239800 Sobic002G280600--Sobic010G239800 Sobic003G273400 Sobic003G273400 Sobic002G280600--Sobic003G273400 Sobic001G526300 Sobic001G526300 Sobic002G280600--Sobic001G526300 Sobic001G427500 Sobic001G427500 Sobic004G227300--Sobic001G427500 Sobic001G261597 Sobic001G261597 Sobic004G227300--Sobic001G261597 Sobic006G171700 Sobic006G171700 Sobic004G227300--Sobic006G171700 Sobic003G359900 Sobic003G359900 Sobic004G227300--Sobic003G359900 Sobic004G227300--Sobic003G299000 Sobic004G214100 Sobic004G214100 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic006G119800 Sobic006G119800 Sobic004G227300--Sobic006G119800 Sobic007G168200 Sobic007G168200 Sobic001G039800--Sobic007G168200 Sobic003G138600 Sobic003G138600 Sobic001G039800--Sobic003G138600 Sobic002G242200 Sobic002G242200 Sobic001G039800--Sobic002G242200 Sobic009G190800 Sobic009G190800 Sobic001G039800--Sobic009G190800 Sobic006G269000 Sobic006G269000 Sobic001G039800--Sobic006G269000 Sobic004G060600 Sobic004G060600 Sobic001G039800--Sobic004G060600 Sobic010G108900 Sobic010G108900 Sobic001G039800--Sobic010G108900 Sobic001G294200 Sobic001G294200 Sobic001G039800--Sobic001G294200 Sobic001G218800 Sobic001G218800 Sobic001G039800--Sobic001G218800 Sobic002G117200 Sobic002G117200 Sobic009G156300--Sobic002G117200 Sobic004G352900 Sobic004G352900 Sobic009G156300--Sobic004G352900 Sobic009G156300--Sobic001G285000 Sobic010G066300 Sobic010G066300 Sobic009G156300--Sobic010G066300 Sobic009G131100 Sobic009G131100 Sobic009G156300--Sobic009G131100 Sobic009G156300--Sobic004G060600 Sobic002G254650 Sobic002G254650 Sobic009G156300--Sobic002G254650 Sobic002G427900 Sobic002G427900 Sobic009G156300--Sobic002G427900 Sobic010G065400 Sobic010G065400 Sobic009G156300--Sobic010G065400 Sobic003G077900 Sobic003G077900 Sobic003G299000--Sobic003G077900 Sobic004G348900 Sobic004G348900 Sobic003G299000--Sobic004G348900 Sobic001G206900 Sobic001G206900 Sobic003G299000--Sobic001G206900 Sobic003G436300 Sobic003G436300 Sobic003G299000--Sobic003G436300 Sobic003G299000--Sobic004G227300 Sobic001G417900 Sobic001G417900 Sobic003G299000--Sobic001G417900 Sobic002G418700 Sobic002G418700 Sobic003G299000--Sobic002G418700 Sobic003G217400 Sobic003G217400 Sobic003G299000--Sobic003G217400 Sobic003G299000--Sobic002G242200 Sobic004G106700 Sobic004G106700 Sobic001G110300--Sobic004G106700 Sobic001G110300--Sobic001G451901 Sobic003G305100 Sobic003G305100 Sobic001G110300--Sobic003G305100 Sobic004G184000 Sobic004G184000 Sobic001G110300--Sobic004G184000 Sobic005G110526 Sobic005G110526 Sobic001G110300--Sobic005G110526 Sobic001G129400 Sobic001G129400 Sobic001G110300--Sobic001G129400 Sobic006G231500 Sobic006G231500 Sobic001G110300--Sobic006G231500 Sobic006G237200 Sobic006G237200 Sobic001G110300--Sobic006G237200 Sobic002G260200 Sobic002G260200 Sobic001G110300--Sobic002G260200 Sobic001G285000--Sobic009G156300 Sobic001G285000--Sobic004G352900 Sobic001G285000--Sobic010G066300 Sobic001G321500 Sobic001G321500 Sobic001G285000--Sobic001G321500 Sobic005G229400 Sobic005G229400 Sobic001G285000--Sobic005G229400 Sobic001G285000--Sobic002G117200 Sobic001G285000--Sobic001G410100 Sobic003G296300 Sobic003G296300 Sobic001G285000--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G285000--Sobic001G530350
Octagon: transcription factors


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