Gene annotation
Transcriptome id Sobic.010G233200.2,Sobic.010G233200.1
Synonym HSA32, Sb10g027540
Functional annotation phosphosulfolactate synthase-related protein, putative, expressed
UniProt A0A194YL22 , A0A194YKZ4
Pfam PF02679
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21320 : Aldolase-type TIM barrel family protein
RAP-DB (Rice) LOC_Os06g46900.1 : phosphosulfolactate synthase-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a018154
Brachypodium -
Barley HORVU7Hr1G101920.4 , HORVU7Hr1G101920.5 , HORVU7Hr1G101920.2 , HORVU7Hr1G101920.3 , HORVU7Hr1G101920.1
Wheat TraesCS7D02G440200 , TraesCS7B02G351000
Populus -


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cDNA sequences
Sobic.010G233200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G267300 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
2 Sobic.002G182900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G050550 - -
4 Sobic.010G245900 - -
5 Sobic.001G134000 - -
6 Sobic.008G075700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@verticillium wilt disease resistance protein, putative, expressed -
7 Sobic.002G172000 similar to Os09g0325700 protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
8 Sobic.010G132100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thioredoxin domain-containing protein 17, putative, expressed -
9 Sobic.003G334500 - -
10 Sobic.005G230100 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.004G219700 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
12 Sobic.004G271350 - -
13 Sobic.001G170600 OsFBX85 - F-box domain containing protein, expressed -
14 Sobic.001G454850 - -
15 Sobic.010G124800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase 7, putative, expressed -
16 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
17 Sobic.004G299300 protein kinase domain containing protein, expressed -
18 Sobic.001G237250 - -
19 Sobic.007G131700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
20 Sobic.003G267100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic010G233200 Sobic010G233200 Sobic003G267300 Sobic003G267300 Sobic010G233200--Sobic003G267300 Sobic002G182900 Sobic002G182900 Sobic010G233200--Sobic002G182900 Sobic006G050550 Sobic006G050550 Sobic010G233200--Sobic006G050550 Sobic010G245900 Sobic010G245900 Sobic010G233200--Sobic010G245900 Sobic001G134000 Sobic001G134000 Sobic010G233200--Sobic001G134000 Sobic008G075700 Sobic008G075700 Sobic010G233200--Sobic008G075700 Sobic002G172000 Sobic002G172000 Sobic010G233200--Sobic002G172000 Sobic010G132100 Sobic010G132100 Sobic010G233200--Sobic010G132100 Sobic003G334500 Sobic003G334500 Sobic010G233200--Sobic003G334500 Sobic003G267300--Sobic003G334500 Sobic003G267300--Sobic002G182900 Sobic003G267300--Sobic006G050550 Sobic003G267300--Sobic010G233200 Sobic005G230100 Sobic005G230100 Sobic003G267300--Sobic005G230100 Sobic003G251200 Sobic003G251200 Sobic003G267300--Sobic003G251200 Sobic008G016850 Sobic008G016850 Sobic003G267300--Sobic008G016850 Sobic001G170600 Sobic001G170600 Sobic003G267300--Sobic001G170600 Sobic009G025800 Sobic009G025800 Sobic003G267300--Sobic009G025800 Sobic009G253950 Sobic009G253950 Sobic002G182900--Sobic009G253950 Sobic002G182800 Sobic002G182800 Sobic002G182900--Sobic002G182800 Sobic009G216900 Sobic009G216900 Sobic002G182900--Sobic009G216900 Sobic003G040800 Sobic003G040800 Sobic002G182900--Sobic003G040800 Sobic003G233900 Sobic003G233900 Sobic002G182900--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic002G182900--Sobic009G128300 Sobic002G182900--Sobic006G050550 Sobic010G085400 Sobic010G085400 Sobic002G182900--Sobic010G085400 Sobic003G227600 Sobic003G227600 Sobic002G182900--Sobic003G227600 Sobic005G181600 Sobic005G181600 Sobic006G050550--Sobic005G181600 Sobic006G050550--Sobic002G182900 Sobic006G050550--Sobic005G230100 Sobic006G050550--Sobic010G245900 Sobic006G050550--Sobic003G267300 Sobic006G050550--Sobic009G253950 Sobic006G050550--Sobic008G016850 Sobic006G050550--Sobic001G134000 Sobic006G050550--Sobic003G334500 Sobic003G083000 Sobic003G083000 Sobic010G245900--Sobic003G083000 Sobic003G397400 Sobic003G397400 Sobic010G245900--Sobic003G397400 Sobic007G169600 Sobic007G169600 Sobic010G245900--Sobic007G169600 Sobic007G073750 Sobic007G073750 Sobic010G245900--Sobic007G073750 Sobic007G143100 Sobic007G143100 Sobic010G245900--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic010G245900--Sobic005G016900 Sobic007G143200 Sobic007G143200 Sobic010G245900--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic010G245900--Sobic009G076700 Sobic004G219700 Sobic004G219700 Sobic010G245900--Sobic004G219700 Sobic002G319900 Sobic002G319900 Sobic001G134000--Sobic002G319900 Sobic007G014500 Sobic007G014500 Sobic001G134000--Sobic007G014500 Sobic001G134000--Sobic003G334500 Sobic004G271350 Sobic004G271350 Sobic001G134000--Sobic004G271350 Sobic003G267150 Sobic003G267150 Sobic001G134000--Sobic003G267150 Sobic005G216833 Sobic005G216833 Sobic001G134000--Sobic005G216833 Sobic008G041500 Sobic008G041500 Sobic001G134000--Sobic008G041500 Sobic003G282400 Sobic003G282400 Sobic001G134000--Sobic003G282400 Sobic007G179100 Sobic007G179100 Sobic001G134000--Sobic007G179100 Sobic009G064400 Sobic009G064400 Sobic008G075700--Sobic009G064400 Sobic008G075600 Sobic008G075600 Sobic008G075700--Sobic008G075600 Sobic008G075700--Sobic010G245900 Sobic008G075700--Sobic003G397400 Sobic008G075700--Sobic007G143100 Sobic003G397500 Sobic003G397500 Sobic008G075700--Sobic003G397500 Sobic008G075700--Sobic007G143200 Sobic008G075700--Sobic005G016900 Sobic002G331450 Sobic002G331450 Sobic008G075700--Sobic002G331450 Sobic002G038733 Sobic002G038733 Sobic002G172000--Sobic002G038733 Sobic002G172000--Sobic004G219700 Sobic010G231900 Sobic010G231900 Sobic002G172000--Sobic010G231900 Sobic007G013800 Sobic007G013800 Sobic002G172000--Sobic007G013800 Sobic002G172000--Sobic010G245900 Sobic010G146500 Sobic010G146500 Sobic002G172000--Sobic010G146500 Sobic008G087500 Sobic008G087500 Sobic002G172000--Sobic008G087500 Sobic008G087800 Sobic008G087800 Sobic002G172000--Sobic008G087800 Sobic008G186300 Sobic008G186300 Sobic002G172000--Sobic008G186300 Sobic009G027200 Sobic009G027200 Sobic010G132100--Sobic009G027200 Sobic002G112200 Sobic002G112200 Sobic010G132100--Sobic002G112200 Sobic004G223700 Sobic004G223700 Sobic010G132100--Sobic004G223700 Sobic001G050650 Sobic001G050650 Sobic010G132100--Sobic001G050650 Sobic007G098050 Sobic007G098050 Sobic010G132100--Sobic007G098050 Sobic001G449300 Sobic001G449300 Sobic010G132100--Sobic001G449300 Sobic010G098800 Sobic010G098800 Sobic010G132100--Sobic010G098800 Sobic004G206000 Sobic004G206000 Sobic010G132100--Sobic004G206000 SobicK031400 SobicK031400 Sobic010G132100--SobicK031400 Sobic003G334500--Sobic008G041500 Sobic003G334500--Sobic007G179100 Sobic009G134700 Sobic009G134700 Sobic003G334500--Sobic009G134700 Sobic006G083050 Sobic006G083050 Sobic003G334500--Sobic006G083050 Sobic006G214800 Sobic006G214800 Sobic003G334500--Sobic006G214800 Sobic001G180950 Sobic001G180950 Sobic003G334500--Sobic001G180950 Sobic010G156300 Sobic010G156300 Sobic003G334500--Sobic010G156300 Sobic008G142500 Sobic008G142500 Sobic003G334500--Sobic008G142500 Sobic010G166850 Sobic010G166850 Sobic003G334500--Sobic010G166850
Octagon: transcription factors


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