Gene annotation
Transcriptome id Sobic.010G253000.2,Sobic.010G253000.1
Synonym Sb10g029110
Functional annotation expressed protein
UniProt A0A194YMG0 , A0A194YLD6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g48930.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ95981 , KQJ95980 , KQJ95982
Barley HORVU7Hr1G099900.1 , HORVU7Hr1G099900.2 , HORVU7Hr1G099900.3 , HORVU7Hr1G099900.4
Wheat TraesCS7B02G336200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G174800 - -
2 Sobic.010G279300 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed -
3 Sobic.004G218500 expressed protein -
4 Sobic.008G000900 - -
5 Sobic.006G225100 OsFBDUF17 - F-box and DUF domain containing protein, expressed -
6 Sobic.008G060150 - -
7 Sobic.001G063800 ML domain protein, putative, expressed -
8 Sobic.002G420300 RNA-binding zinc finger protein, putative, expressed -
9 Sobic.004G326900 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
10 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.004G055600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
12 Sobic.002G064400 expressed protein -
13 Sobic.007G197400 pentatricopeptide, putative, expressed -
14 Sobic.001G306700 PPR repeat domain containing protein, putative, expressed -
15 Sobic.002G083400 PHD finger protein, putative, expressed -
16 Sobic.005G030400 cytochrome P450, putative, expressed K09588: CYP90A1, cytochrome P450 family 90 subfamily A polypeptide 1
17 Sobic.002G106900 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.008G125100 Mur ligase family protein, putative, expressed -
19 Sobic.003G114100 expressed protein -
20 Sobic.001G201966 - -


Gene co-expression network
sample Sobic010G253000 Sobic010G253000 Sobic003G174800 Sobic003G174800 Sobic010G253000--Sobic003G174800 Sobic010G279300 Sobic010G279300 Sobic010G253000--Sobic010G279300 Sobic004G218500 Sobic004G218500 Sobic010G253000--Sobic004G218500 Sobic008G000900 Sobic008G000900 Sobic010G253000--Sobic008G000900 Sobic006G225100 Sobic006G225100 Sobic010G253000--Sobic006G225100 Sobic008G060150 Sobic008G060150 Sobic010G253000--Sobic008G060150 Sobic001G063800 Sobic001G063800 Sobic010G253000--Sobic001G063800 Sobic002G420300 Sobic002G420300 Sobic010G253000--Sobic002G420300 Sobic004G326900 Sobic004G326900 Sobic010G253000--Sobic004G326900 Sobic003G174800--Sobic008G000900 Sobic001G087100 Sobic001G087100 Sobic003G174800--Sobic001G087100 Sobic006G214400 Sobic006G214400 Sobic003G174800--Sobic006G214400 Sobic010G143200 Sobic010G143200 Sobic003G174800--Sobic010G143200 Sobic007G043900 Sobic007G043900 Sobic003G174800--Sobic007G043900 Sobic004G175600 Sobic004G175600 Sobic003G174800--Sobic004G175600 Sobic001G485600 Sobic001G485600 Sobic003G174800--Sobic001G485600 Sobic001G043400 Sobic001G043400 Sobic003G174800--Sobic001G043400 Sobic010G268300 Sobic010G268300 Sobic003G174800--Sobic010G268300 Sobic008G123300 Sobic008G123300 Sobic010G279300--Sobic008G123300 Sobic002G239601 Sobic002G239601 Sobic010G279300--Sobic002G239601 Sobic010G279300--Sobic006G225100 Sobic001G300900 Sobic001G300900 Sobic010G279300--Sobic001G300900 Sobic007G070000 Sobic007G070000 Sobic010G279300--Sobic007G070000 Sobic008G125100 Sobic008G125100 Sobic010G279300--Sobic008G125100 Sobic001G495400 Sobic001G495400 Sobic010G279300--Sobic001G495400 Sobic006G273900 Sobic006G273900 Sobic010G279300--Sobic006G273900 Sobic008G058000 Sobic008G058000 Sobic010G279300--Sobic008G058000 Sobic003G114100 Sobic003G114100 Sobic004G218500--Sobic003G114100 Sobic008G101500 Sobic008G101500 Sobic004G218500--Sobic008G101500 Sobic003G170200 Sobic003G170200 Sobic004G218500--Sobic003G170200 Sobic010G091200 Sobic010G091200 Sobic004G218500--Sobic010G091200 Sobic009G085100 Sobic009G085100 Sobic004G218500--Sobic009G085100 Sobic008G118000 Sobic008G118000 Sobic004G218500--Sobic008G118000 Sobic004G218500--Sobic006G214400 Sobic007G179750 Sobic007G179750 Sobic004G218500--Sobic007G179750 Sobic004G218500--Sobic004G175600 Sobic008G000900--Sobic003G174800 Sobic008G125600 Sobic008G125600 Sobic008G000900--Sobic008G125600 Sobic008G000900--Sobic010G143200 Sobic004G062800 Sobic004G062800 Sobic008G000900--Sobic004G062800 Sobic008G125501 Sobic008G125501 Sobic008G000900--Sobic008G125501 Sobic008G000900--Sobic006G214400 Sobic008G000900--Sobic001G087100 Sobic003G159450 Sobic003G159450 Sobic008G000900--Sobic003G159450 Sobic008G091671 Sobic008G091671 Sobic008G000900--Sobic008G091671 Sobic006G225100--Sobic010G279300 Sobic001G032200 Sobic001G032200 Sobic006G225100--Sobic001G032200 Sobic008G011300 Sobic008G011300 Sobic006G225100--Sobic008G011300 Sobic008G097600 Sobic008G097600 Sobic006G225100--Sobic008G097600 Sobic009G107300 Sobic009G107300 Sobic006G225100--Sobic009G107300 Sobic006G225100--Sobic002G239601 Sobic006G225100--Sobic001G495400 Sobic006G012300 Sobic006G012300 Sobic006G225100--Sobic006G012300 Sobic001G250700 Sobic001G250700 Sobic006G225100--Sobic001G250700 Sobic004G144700 Sobic004G144700 Sobic008G060150--Sobic004G144700 Sobic002G215000 Sobic002G215000 Sobic008G060150--Sobic002G215000 Sobic001G201966 Sobic001G201966 Sobic008G060150--Sobic001G201966 Sobic008G105900 Sobic008G105900 Sobic008G060150--Sobic008G105900 Sobic003G074700 Sobic003G074700 Sobic008G060150--Sobic003G074700 Sobic008G060150--Sobic003G114100 Sobic009G010700 Sobic009G010700 Sobic008G060150--Sobic009G010700 Sobic008G131700 Sobic008G131700 Sobic008G060150--Sobic008G131700 Sobic005G063700 Sobic005G063700 Sobic008G060150--Sobic005G063700 Sobic001G063800--Sobic004G175600 Sobic001G063800--Sobic008G011300 Sobic003G218801 Sobic003G218801 Sobic001G063800--Sobic003G218801 Sobic001G296400 Sobic001G296400 Sobic001G063800--Sobic001G296400 Sobic010G204900 Sobic010G204900 Sobic001G063800--Sobic010G204900 Sobic001G063800--Sobic001G250700 Sobic003G265500 Sobic003G265500 Sobic001G063800--Sobic003G265500 Sobic001G063800--Sobic001G032200 Sobic002G072300 Sobic002G072300 Sobic001G063800--Sobic002G072300 Sobic002G420300--Sobic008G105900 Sobic007G112900 Sobic007G112900 Sobic002G420300--Sobic007G112900 Sobic001G497200 Sobic001G497200 Sobic002G420300--Sobic001G497200 Sobic002G420300--Sobic010G143200 Sobic002G420300--Sobic001G201966 Sobic003G163100 Sobic003G163100 Sobic002G420300--Sobic003G163100 Sobic002G420300--Sobic005G063700 Sobic001G428000 Sobic001G428000 Sobic002G420300--Sobic001G428000 Sobic010G068400 Sobic010G068400 Sobic002G420300--Sobic010G068400 Sobic004G326900--Sobic008G000900 Sobic004G326900--Sobic003G174800 Sobic004G326900--Sobic008G091671 Sobic003G006800 Sobic003G006800 Sobic004G326900--Sobic003G006800 Sobic004G326900--Sobic008G060150 Sobic004G326900--Sobic003G159450 Sobic004G326900--Sobic010G253000 Sobic004G326900--Sobic008G105900 Sobic002G095900 Sobic002G095900 Sobic004G326900--Sobic002G095900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.