Gene annotation
Transcriptome id Sobic.010G260800.4,Sobic.010G260800.5,Sobic.010G260800.7,Sobic.010G260800.3,Sobic.010G260800.6
Synonym Sb10g029720, CYCA2, CYC2BAT, CYC3B, 2
Functional annotation cyclin, putative, expressed
UniProt A0A194YML6
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF212
NCBI CDD KOG0654; G2/Mitotic-specific cyclin A
KEGG Orthology K06627; cyclin-A
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT5G11300 : mitotic-like cyclin 3B from Arabidopsis
RAP-DB (Rice) LOC_Os12g31810.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a018453
Brachypodium -
Barley -
Wheat TraesCS5D02G121100 , TraesCS5D02G121100 , TraesCS5A02G108500 , TraesCS5A02G108500 , TraesCS5B02G114300 , TraesCS5B02G114300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
2 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
3 Sobic.001G380700 bZIP transcription factor family protein, putative, expressed -
4 Sobic.001G126800 WD domain, G-beta repeat domain containing protein, expressed K11790: DTL, CDT2, denticleless
5 Sobic.007G102000 formin-like protein 13, putative, expressed -
6 Sobic.001G323400 expressed protein -
7 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
8 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
9 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
10 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
11 Sobic.010G269800 Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed K06640: serine/threonine-protein kinase ATR
12 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
13 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
14 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
16 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
17 Sobic.006G119300 ribonuclease H2 subunit B, putative, expressed K10744: ribonuclease H2 subunit B
18 Sobic.008G073500 AAA-type ATPase family protein, putative, expressed -
19 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
20 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase


Gene co-expression network
sample Sobic010G260800 Sobic010G260800 Sobic009G214500 Sobic009G214500 Sobic010G260800--Sobic009G214500 Sobic002G390800 Sobic002G390800 Sobic010G260800--Sobic002G390800 Sobic001G380700 Sobic001G380700 Sobic010G260800--Sobic001G380700 Sobic001G126800 Sobic001G126800 Sobic010G260800--Sobic001G126800 Sobic007G102000 Sobic007G102000 Sobic010G260800--Sobic007G102000 Sobic001G323400 Sobic001G323400 Sobic010G260800--Sobic001G323400 Sobic010G038200 Sobic010G038200 Sobic010G260800--Sobic010G038200 Sobic005G210500 Sobic005G210500 Sobic010G260800--Sobic005G210500 Sobic006G126800 Sobic006G126800 Sobic010G260800--Sobic006G126800 Sobic007G102300 Sobic007G102300 Sobic009G214500--Sobic007G102300 Sobic001G385300 Sobic001G385300 Sobic009G214500--Sobic001G385300 Sobic009G214500--Sobic007G102000 Sobic009G163100 Sobic009G163100 Sobic009G214500--Sobic009G163100 Sobic001G327100 Sobic001G327100 Sobic009G214500--Sobic001G327100 Sobic009G214500--Sobic001G380700 Sobic003G376900 Sobic003G376900 Sobic009G214500--Sobic003G376900 Sobic004G241300 Sobic004G241300 Sobic009G214500--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic009G214500--Sobic003G423700 Sobic001G082800 Sobic001G082800 Sobic002G390800--Sobic001G082800 Sobic002G390800--Sobic007G102000 Sobic009G125800 Sobic009G125800 Sobic002G390800--Sobic009G125800 Sobic008G047500 Sobic008G047500 Sobic002G390800--Sobic008G047500 Sobic002G192900 Sobic002G192900 Sobic002G390800--Sobic002G192900 Sobic009G136000 Sobic009G136000 Sobic002G390800--Sobic009G136000 Sobic008G004900 Sobic008G004900 Sobic002G390800--Sobic008G004900 Sobic001G248400 Sobic001G248400 Sobic002G390800--Sobic001G248400 Sobic002G390800--Sobic010G038200 Sobic001G380700--Sobic001G385300 Sobic001G131900 Sobic001G131900 Sobic001G380700--Sobic001G131900 Sobic004G298600 Sobic004G298600 Sobic001G380700--Sobic004G298600 Sobic001G380700--Sobic009G214500 Sobic007G105700 Sobic007G105700 Sobic001G380700--Sobic007G105700 Sobic001G433600 Sobic001G433600 Sobic001G380700--Sobic001G433600 Sobic006G189000 Sobic006G189000 Sobic001G380700--Sobic006G189000 Sobic001G380700--Sobic003G376900 Sobic003G293400 Sobic003G293400 Sobic001G380700--Sobic003G293400 Sobic001G126800--Sobic003G423700 Sobic001G126800--Sobic004G241300 Sobic008G104000 Sobic008G104000 Sobic001G126800--Sobic008G104000 Sobic002G420100 Sobic002G420100 Sobic001G126800--Sobic002G420100 Sobic001G126800--Sobic001G248400 Sobic010G182000 Sobic010G182000 Sobic001G126800--Sobic010G182000 Sobic002G186200 Sobic002G186200 Sobic001G126800--Sobic002G186200 Sobic001G126800--Sobic009G214500 Sobic010G253200 Sobic010G253200 Sobic001G126800--Sobic010G253200 Sobic007G102000--Sobic009G214500 Sobic008G085950 Sobic008G085950 Sobic007G102000--Sobic008G085950 Sobic008G073500 Sobic008G073500 Sobic007G102000--Sobic008G073500 Sobic007G102000--Sobic004G241300 Sobic007G102000--Sobic002G390800 Sobic007G102000--Sobic001G385300 Sobic007G102000--Sobic004G298600 Sobic007G102000--Sobic007G102300 Sobic007G102000--Sobic007G105700 Sobic001G323400--Sobic001G126800 Sobic003G159700 Sobic003G159700 Sobic001G323400--Sobic003G159700 Sobic006G095000 Sobic006G095000 Sobic001G323400--Sobic006G095000 Sobic002G308000 Sobic002G308000 Sobic001G323400--Sobic002G308000 Sobic001G323400--Sobic002G192900 Sobic004G064600 Sobic004G064600 Sobic001G323400--Sobic004G064600 Sobic010G269800 Sobic010G269800 Sobic001G323400--Sobic010G269800 Sobic001G323400--Sobic002G390800 Sobic001G011000 Sobic001G011000 Sobic001G323400--Sobic001G011000 Sobic010G038200--Sobic009G136000 Sobic010G030000 Sobic010G030000 Sobic010G038200--Sobic010G030000 Sobic010G009700 Sobic010G009700 Sobic010G038200--Sobic010G009700 Sobic008G131900 Sobic008G131900 Sobic010G038200--Sobic008G131900 Sobic010G038200--Sobic001G248400 Sobic005G060100 Sobic005G060100 Sobic010G038200--Sobic005G060100 Sobic010G038200--Sobic009G214500 Sobic003G216600 Sobic003G216600 Sobic010G038200--Sobic003G216600 Sobic002G052800 Sobic002G052800 Sobic010G038200--Sobic002G052800 Sobic003G418400 Sobic003G418400 Sobic005G210500--Sobic003G418400 Sobic001G486600 Sobic001G486600 Sobic005G210500--Sobic001G486600 Sobic005G210500--Sobic009G214500 Sobic005G210500--Sobic010G038200 Sobic001G117900 Sobic001G117900 Sobic005G210500--Sobic001G117900 Sobic003G005500 Sobic003G005500 Sobic005G210500--Sobic003G005500 Sobic010G252200 Sobic010G252200 Sobic005G210500--Sobic010G252200 Sobic005G210500--Sobic007G102300 Sobic005G210500--Sobic010G030000 Sobic009G081800 Sobic009G081800 Sobic006G126800--Sobic009G081800 Sobic006G126800--Sobic010G252200 Sobic006G126800--Sobic010G269800 Sobic002G426100 Sobic002G426100 Sobic006G126800--Sobic002G426100 Sobic006G127200 Sobic006G127200 Sobic006G126800--Sobic006G127200 Sobic002G173400 Sobic002G173400 Sobic006G126800--Sobic002G173400 Sobic002G095300 Sobic002G095300 Sobic006G126800--Sobic002G095300 Sobic002G286632 Sobic002G286632 Sobic006G126800--Sobic002G286632 Sobic006G126800--Sobic005G210500
Octagon: transcription factors


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