Gene annotation
Transcriptome id Sobic.010G261100.1
Synonym
Functional annotation invertase/pectin methylesterase inhibitor family protein, putative, expressed
UniProt A0A194YLJ6
Pfam PF04043
Panther DB PTHR31080 PTHR31080:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity


Orthologs (automatic annotation)
TAIR AT1G62770 : Plant invertase/pectin methylesterase inhibitor superfamily protein
RAP-DB (Rice) LOC_Os06g49760.1 : invertase/pectin methylesterase inhibitor family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041747 , Zm00025a018454
Brachypodium KQK17511
Barley HORVU7Hr1G095080.2 , HORVU7Hr1G095080.1 , HORVU7Hr1G095080.5 , HORVU7Hr1G095080.4
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G261100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G354200 O-methyltransferase, putative, expressed -
2 Sobic.002G201600 methyltransferase, putative, expressed -
3 Sobic.003G275501 - K14497: protein phosphatase 2C
4 Sobic.008G070350 - K01945: phosphoribosylamine---glycine ligase
5 Sobic.010G259233 - -
6 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
7 Sobic.010G275100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
8 Sobic.001G129700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
9 Sobic.010G001900 Long chain acyl-CoA oxidase(PubMedID : 18985313)@acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
10 Sobic.005G215601 - -
11 Sobic.001G025101 - -
12 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
13 Sobic.004G231300 dehydration response related protein, putative, expressed -
14 Sobic.001G436800 expressed protein -
15 Sobic.004G245500 expressed protein -
16 Sobic.010G238900 oryzain beta chain precursor, putative, expressed -
17 Sobic.009G068800 expressed protein -
18 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
19 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
20 Sobic.006G195600 expressed protein K14376: poly(A) polymerase


Gene co-expression network
sample Sobic010G261100 Sobic010G261100 Sobic001G354200 Sobic001G354200 Sobic010G261100--Sobic001G354200 Sobic002G201600 Sobic002G201600 Sobic010G261100--Sobic002G201600 Sobic003G275501 Sobic003G275501 Sobic010G261100--Sobic003G275501 Sobic008G070350 Sobic008G070350 Sobic010G261100--Sobic008G070350 Sobic010G259233 Sobic010G259233 Sobic010G261100--Sobic010G259233 Sobic006G032700 Sobic006G032700 Sobic010G261100--Sobic006G032700 Sobic010G275100 Sobic010G275100 Sobic010G261100--Sobic010G275100 Sobic001G129700 Sobic001G129700 Sobic010G261100--Sobic001G129700 Sobic010G001900 Sobic010G001900 Sobic010G261100--Sobic010G001900 Sobic001G354200--Sobic006G032700 Sobic001G397200 Sobic001G397200 Sobic001G354200--Sobic001G397200 Sobic001G354200--Sobic010G275100 Sobic010G032100 Sobic010G032100 Sobic001G354200--Sobic010G032100 Sobic003G138300 Sobic003G138300 Sobic001G354200--Sobic003G138300 Sobic001G481500 Sobic001G481500 Sobic001G354200--Sobic001G481500 Sobic001G309600 Sobic001G309600 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic009G229000 Sobic009G229000 Sobic001G354200--Sobic009G229000 Sobic001G533400 Sobic001G533400 Sobic002G201600--Sobic001G533400 Sobic002G201600--Sobic010G001900 Sobic001G339700 Sobic001G339700 Sobic002G201600--Sobic001G339700 Sobic008G025600 Sobic008G025600 Sobic002G201600--Sobic008G025600 Sobic009G120000 Sobic009G120000 Sobic002G201600--Sobic009G120000 Sobic006G137800 Sobic006G137800 Sobic002G201600--Sobic006G137800 Sobic010G209900 Sobic010G209900 Sobic002G201600--Sobic010G209900 Sobic004G273400 Sobic004G273400 Sobic002G201600--Sobic004G273400 Sobic002G416600 Sobic002G416600 Sobic002G201600--Sobic002G416600 Sobic003G275501--Sobic004G273400 Sobic001G243500 Sobic001G243500 Sobic003G275501--Sobic001G243500 Sobic007G148000 Sobic007G148000 Sobic003G275501--Sobic007G148000 Sobic005G203100 Sobic005G203100 Sobic003G275501--Sobic005G203100 Sobic001G243600 Sobic001G243600 Sobic003G275501--Sobic001G243600 Sobic006G275401 Sobic006G275401 Sobic003G275501--Sobic006G275401 Sobic003G088500 Sobic003G088500 Sobic003G275501--Sobic003G088500 Sobic003G275501--Sobic010G209900 Sobic004G333150 Sobic004G333150 Sobic003G275501--Sobic004G333150 Sobic008G070350--Sobic001G397200 Sobic009G035200 Sobic009G035200 Sobic008G070350--Sobic009G035200 Sobic005G051200 Sobic005G051200 Sobic008G070350--Sobic005G051200 Sobic005G103500 Sobic005G103500 Sobic008G070350--Sobic005G103500 Sobic008G070350--Sobic001G309600 Sobic008G070350--Sobic006G032700 Sobic007G026600 Sobic007G026600 Sobic008G070350--Sobic007G026600 Sobic004G280200 Sobic004G280200 Sobic008G070350--Sobic004G280200 Sobic003G086600 Sobic003G086600 Sobic008G070350--Sobic003G086600 Sobic002G109800 Sobic002G109800 Sobic010G259233--Sobic002G109800 Sobic004G314200 Sobic004G314200 Sobic010G259233--Sobic004G314200 Sobic007G106050 Sobic007G106050 Sobic010G259233--Sobic007G106050 Sobic009G079925 Sobic009G079925 Sobic010G259233--Sobic009G079925 Sobic006G032700--Sobic003G138300 Sobic006G032700--Sobic010G032100 Sobic006G032700--Sobic001G309600 Sobic006G032700--Sobic001G397200 Sobic006G032700--Sobic001G481500 Sobic006G032700--Sobic001G354200 Sobic010G031100 Sobic010G031100 Sobic006G032700--Sobic010G031100 Sobic002G215300 Sobic002G215300 Sobic006G032700--Sobic002G215300 Sobic001G149800 Sobic001G149800 Sobic006G032700--Sobic001G149800 Sobic010G275100--Sobic006G032700 Sobic010G275100--Sobic001G354200 Sobic010G275100--Sobic001G481500 Sobic010G275100--Sobic003G138300 Sobic010G275100--Sobic001G397200 Sobic010G275100--Sobic010G032100 Sobic010G275100--Sobic001G309600 Sobic010G275100--Sobic010G031100 Sobic010G275100--Sobic002G215300 Sobic010G032000 Sobic010G032000 Sobic001G129700--Sobic010G032000 Sobic005G215601 Sobic005G215601 Sobic001G129700--Sobic005G215601 Sobic009G123400 Sobic009G123400 Sobic001G129700--Sobic009G123400 Sobic001G436800 Sobic001G436800 Sobic001G129700--Sobic001G436800 Sobic004G340200 Sobic004G340200 Sobic001G129700--Sobic004G340200 Sobic007G066900 Sobic007G066900 Sobic001G129700--Sobic007G066900 Sobic004G210700 Sobic004G210700 Sobic001G129700--Sobic004G210700 Sobic010G031900 Sobic010G031900 Sobic001G129700--Sobic010G031900 Sobic001G129700--Sobic001G354200 Sobic010G001900--Sobic001G533400 Sobic010G001900--Sobic002G201600 Sobic010G001900--Sobic005G051200 Sobic010G001900--Sobic001G339700 Sobic002G414600 Sobic002G414600 Sobic010G001900--Sobic002G414600 Sobic010G001900--Sobic008G025600 Sobic001G317200 Sobic001G317200 Sobic010G001900--Sobic001G317200 Sobic003G317100 Sobic003G317100 Sobic010G001900--Sobic003G317100 Sobic010G001900--Sobic006G137800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.