Gene annotation
Transcriptome id Sobic.004G231300.1
Synonym TSD2, Sb04g027500, OSU1, QUA2
Functional annotation dehydration response related protein, putative, expressed
UniProt A0A194YR71
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF899
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G78240 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g51860.1 : dehydration response related protein, putative, expressed
MaizeGDB (Corn) Zm00025a022153 , Zm00025a022088 , Zm00025a022065 , Zm00025a033158
Brachypodium KQK01836
Barley HORVU6Hr1G078130.13 , HORVU6Hr1G078130.12 , HORVU6Hr1G078130.11 , HORVU6Hr1G078130.10 , HORVU6Hr1G078130.4 , HORVU6Hr1G078130.9 , HORVU6Hr1G078130.8
Wheat TraesCS6A02G318400 , TraesCS6D02G297600 , TraesCS6D02G297600 , TraesCS6D02G297600 , TraesCS6B02G348700
Populus -


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cDNA sequences
Sobic.004G231300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281300 dehydration response related protein, putative, expressed -
2 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
3 Sobic.010G023800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor, putative, expressed K00800: 3-phosphoshikimate 1-carboxyvinyltransferase
4 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
5 Sobic.003G379600 methyltransferase, putative, expressed -
6 Sobic.004G274900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
7 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
8 Sobic.004G123000 expressed protein -
9 Sobic.002G201600 methyltransferase, putative, expressed -
10 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
11 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
12 Sobic.009G054000 expressed protein -
13 Sobic.004G318100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
14 Sobic.003G333800 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
15 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
16 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
17 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
18 Sobic.003G074900 expressed protein -
19 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
20 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -


Gene co-expression network
sample Sobic004G231300 Sobic004G231300 Sobic001G281300 Sobic001G281300 Sobic004G231300--Sobic001G281300 Sobic001G459900 Sobic001G459900 Sobic004G231300--Sobic001G459900 Sobic010G023800 Sobic010G023800 Sobic004G231300--Sobic010G023800 Sobic001G533400 Sobic001G533400 Sobic004G231300--Sobic001G533400 Sobic003G379600 Sobic003G379600 Sobic004G231300--Sobic003G379600 Sobic004G274900 Sobic004G274900 Sobic004G231300--Sobic004G274900 Sobic001G505500 Sobic001G505500 Sobic004G231300--Sobic001G505500 Sobic004G123000 Sobic004G123000 Sobic004G231300--Sobic004G123000 Sobic002G201600 Sobic002G201600 Sobic004G231300--Sobic002G201600 Sobic001G281300--Sobic004G231300 Sobic001G281300--Sobic001G459900 Sobic001G281300--Sobic010G023800 Sobic001G281300--Sobic003G379600 Sobic001G281300--Sobic001G533400 Sobic001G281300--Sobic002G201600 Sobic010G023900 Sobic010G023900 Sobic001G281300--Sobic010G023900 Sobic009G212200 Sobic009G212200 Sobic001G281300--Sobic009G212200 Sobic009G227400 Sobic009G227400 Sobic001G281300--Sobic009G227400 Sobic001G459900--Sobic010G023800 Sobic001G459900--Sobic009G212200 Sobic001G459900--Sobic001G281300 Sobic001G459900--Sobic003G379600 Sobic001G334300 Sobic001G334300 Sobic001G459900--Sobic001G334300 Sobic010G060500 Sobic010G060500 Sobic001G459900--Sobic010G060500 Sobic001G459900--Sobic004G231300 Sobic001G014000 Sobic001G014000 Sobic001G459900--Sobic001G014000 Sobic009G144300 Sobic009G144300 Sobic001G459900--Sobic009G144300 Sobic007G115100 Sobic007G115100 Sobic010G023800--Sobic007G115100 Sobic010G023800--Sobic010G060500 Sobic004G269700 Sobic004G269700 Sobic010G023800--Sobic004G269700 Sobic010G023800--Sobic001G459900 Sobic003G209000 Sobic003G209000 Sobic010G023800--Sobic003G209000 Sobic009G149400 Sobic009G149400 Sobic010G023800--Sobic009G149400 Sobic008G129400 Sobic008G129400 Sobic010G023800--Sobic008G129400 Sobic002G187500 Sobic002G187500 Sobic010G023800--Sobic002G187500 Sobic010G023800--Sobic001G505500 Sobic001G339700 Sobic001G339700 Sobic001G533400--Sobic001G339700 Sobic010G001900 Sobic010G001900 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic001G533400--Sobic002G201600 Sobic008G025600 Sobic008G025600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic006G137800 Sobic006G137800 Sobic003G379600--Sobic006G137800 Sobic007G198000 Sobic007G198000 Sobic003G379600--Sobic007G198000 Sobic001G533000 Sobic001G533000 Sobic003G379600--Sobic001G533000 Sobic003G379600--Sobic001G459900 Sobic001G475500 Sobic001G475500 Sobic003G379600--Sobic001G475500 Sobic006G159600 Sobic006G159600 Sobic003G379600--Sobic006G159600 Sobic004G217450 Sobic004G217450 Sobic003G379600--Sobic004G217450 Sobic003G160700 Sobic003G160700 Sobic003G379600--Sobic003G160700 Sobic004G345500 Sobic004G345500 Sobic003G379600--Sobic004G345500 Sobic001G368800 Sobic001G368800 Sobic004G274900--Sobic001G368800 Sobic004G274900--Sobic008G025600 Sobic005G080900 Sobic005G080900 Sobic004G274900--Sobic005G080900 Sobic004G274900--Sobic004G217450 Sobic004G274900--Sobic010G023800 Sobic008G112600 Sobic008G112600 Sobic004G274900--Sobic008G112600 Sobic005G084600 Sobic005G084600 Sobic004G274900--Sobic005G084600 Sobic004G274900--Sobic006G159600 Sobic002G385400 Sobic002G385400 Sobic004G274900--Sobic002G385400 Sobic004G138800 Sobic004G138800 Sobic001G505500--Sobic004G138800 Sobic001G418900 Sobic001G418900 Sobic001G505500--Sobic001G418900 Sobic001G505500--Sobic007G115100 Sobic007G076300 Sobic007G076300 Sobic001G505500--Sobic007G076300 Sobic007G092100 Sobic007G092100 Sobic001G505500--Sobic007G092100 Sobic001G505500--Sobic001G334300 Sobic001G018800 Sobic001G018800 Sobic001G505500--Sobic001G018800 Sobic001G505500--Sobic009G227400 Sobic001G513500 Sobic001G513500 Sobic001G505500--Sobic001G513500 Sobic009G054000 Sobic009G054000 Sobic004G123000--Sobic009G054000 Sobic006G239300 Sobic006G239300 Sobic004G123000--Sobic006G239300 Sobic001G350600 Sobic001G350600 Sobic004G123000--Sobic001G350600 Sobic004G123000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic004G123000--Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic004G123000--Sobic006G013000 Sobic003G155400 Sobic003G155400 Sobic004G123000--Sobic003G155400 Sobic004G159000 Sobic004G159000 Sobic004G123000--Sobic004G159000 Sobic001G404800 Sobic001G404800 Sobic004G123000--Sobic001G404800 Sobic002G201600--Sobic001G533400 Sobic002G201600--Sobic010G001900 Sobic002G201600--Sobic001G339700 Sobic002G201600--Sobic008G025600 Sobic009G120000 Sobic009G120000 Sobic002G201600--Sobic009G120000 Sobic002G201600--Sobic006G137800 Sobic010G209900 Sobic010G209900 Sobic002G201600--Sobic010G209900 Sobic004G273400 Sobic004G273400 Sobic002G201600--Sobic004G273400 Sobic002G416600 Sobic002G416600 Sobic002G201600--Sobic002G416600
Octagon: transcription factors


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