Gene annotation
Transcriptome id Sobic.001G096450.1
Synonym -
Functional annotation -
UniProt A0A1Z5S502
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
2 Sobic.003G439600 amino acid kinase, putative, expressed K09903: uridylate kinase
3 Sobic.001G333000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
4 Sobic.004G179200 expressed protein -
5 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
6 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
7 Sobic.005G138600 - -
8 Sobic.002G331800 PPR repeat containing protein, expressed -
9 Sobic.001G535700 stress responsive A/B Barrel domain containing protein, expressed -
10 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
11 Sobic.002G198000 CRR6, putative, expressed -
12 Sobic.009G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsDegp6 - Putative Deg protease homologue, expressed -
13 Sobic.001G242600 thaumatin family domain containing protein, expressed -
14 Sobic.003G286300 GTPase of unknown function domain containing protein, putative, expressed K03978: GTP-binding protein
15 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.002G271700 rhodanese-like domain containing protein, putative, expressed -
17 Sobic.004G023700 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
18 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
19 Sobic.009G106960 - -
20 Sobic.002G250100 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic001G096450 Sobic001G096450 Sobic003G221700 Sobic003G221700 Sobic001G096450--Sobic003G221700 Sobic003G439600 Sobic003G439600 Sobic001G096450--Sobic003G439600 Sobic001G333000 Sobic001G333000 Sobic001G096450--Sobic001G333000 Sobic004G179200 Sobic004G179200 Sobic001G096450--Sobic004G179200 Sobic001G283700 Sobic001G283700 Sobic001G096450--Sobic001G283700 Sobic003G245800 Sobic003G245800 Sobic001G096450--Sobic003G245800 Sobic005G138600 Sobic005G138600 Sobic001G096450--Sobic005G138600 Sobic002G331800 Sobic002G331800 Sobic001G096450--Sobic002G331800 Sobic001G535700 Sobic001G535700 Sobic001G096450--Sobic001G535700 Sobic003G221700--Sobic001G333000 Sobic006G111600 Sobic006G111600 Sobic003G221700--Sobic006G111600 Sobic003G221700--Sobic004G179200 Sobic003G330100 Sobic003G330100 Sobic003G221700--Sobic003G330100 Sobic002G251400 Sobic002G251400 Sobic003G221700--Sobic002G251400 Sobic002G131700 Sobic002G131700 Sobic003G221700--Sobic002G131700 Sobic003G221700--Sobic003G245800 Sobic009G234200 Sobic009G234200 Sobic003G221700--Sobic009G234200 Sobic008G072300 Sobic008G072300 Sobic003G221700--Sobic008G072300 Sobic003G439600--Sobic003G245800 Sobic010G183400 Sobic010G183400 Sobic003G439600--Sobic010G183400 Sobic003G439600--Sobic002G331800 Sobic006G214700 Sobic006G214700 Sobic003G439600--Sobic006G214700 Sobic005G028900 Sobic005G028900 Sobic003G439600--Sobic005G028900 Sobic002G163700 Sobic002G163700 Sobic003G439600--Sobic002G163700 Sobic006G197700 Sobic006G197700 Sobic003G439600--Sobic006G197700 Sobic001G450600 Sobic001G450600 Sobic003G439600--Sobic001G450600 Sobic003G286300 Sobic003G286300 Sobic003G439600--Sobic003G286300 Sobic001G333000--Sobic003G221700 Sobic002G305700 Sobic002G305700 Sobic001G333000--Sobic002G305700 Sobic001G531200 Sobic001G531200 Sobic001G333000--Sobic001G531200 Sobic010G095200 Sobic010G095200 Sobic001G333000--Sobic010G095200 Sobic006G248200 Sobic006G248200 Sobic001G333000--Sobic006G248200 Sobic001G240000 Sobic001G240000 Sobic001G333000--Sobic001G240000 Sobic003G386300 Sobic003G386300 Sobic001G333000--Sobic003G386300 Sobic001G333000--Sobic002G251400 Sobic002G297400 Sobic002G297400 Sobic001G333000--Sobic002G297400 Sobic004G179200--Sobic002G131700 Sobic004G179200--Sobic003G221700 Sobic004G179200--Sobic002G297400 Sobic001G469933 Sobic001G469933 Sobic004G179200--Sobic001G469933 Sobic003G439000 Sobic003G439000 Sobic004G179200--Sobic003G439000 Sobic004G179200--Sobic006G111600 Sobic004G179200--Sobic009G234200 Sobic005G002900 Sobic005G002900 Sobic004G179200--Sobic005G002900 Sobic004G179200--Sobic003G330100 Sobic006G106400 Sobic006G106400 Sobic001G283700--Sobic006G106400 Sobic009G175500 Sobic009G175500 Sobic001G283700--Sobic009G175500 Sobic001G126300 Sobic001G126300 Sobic001G283700--Sobic001G126300 Sobic004G333400 Sobic004G333400 Sobic001G283700--Sobic004G333400 Sobic004G012900 Sobic004G012900 Sobic001G283700--Sobic004G012900 Sobic001G128600 Sobic001G128600 Sobic001G283700--Sobic001G128600 Sobic004G165000 Sobic004G165000 Sobic001G283700--Sobic004G165000 Sobic002G112400 Sobic002G112400 Sobic001G283700--Sobic002G112400 Sobic005G110400 Sobic005G110400 Sobic001G283700--Sobic005G110400 Sobic003G245800--Sobic006G197700 Sobic002G345200 Sobic002G345200 Sobic003G245800--Sobic002G345200 Sobic004G250200 Sobic004G250200 Sobic003G245800--Sobic004G250200 Sobic003G245800--Sobic010G183400 Sobic003G245800--Sobic003G439600 Sobic002G250100 Sobic002G250100 Sobic003G245800--Sobic002G250100 Sobic003G245800--Sobic003G221700 Sobic003G245800--Sobic009G234200 Sobic003G245800--Sobic003G330100 Sobic010G197000 Sobic010G197000 Sobic005G138600--Sobic010G197000 Sobic005G138600--Sobic002G331800 Sobic002G354600 Sobic002G354600 Sobic005G138600--Sobic002G354600 Sobic005G138600--Sobic003G439600 Sobic010G211500 Sobic010G211500 Sobic005G138600--Sobic010G211500 Sobic009G052700 Sobic009G052700 Sobic005G138600--Sobic009G052700 Sobic005G138600--Sobic006G214700 Sobic005G138600--Sobic003G245800 Sobic001G071200 Sobic001G071200 Sobic005G138600--Sobic001G071200 Sobic010G076800 Sobic010G076800 Sobic002G331800--Sobic010G076800 Sobic002G331800--Sobic006G214700 Sobic002G331800--Sobic003G439600 Sobic002G331800--Sobic004G333400 Sobic002G331800--Sobic010G183400 Sobic001G118400 Sobic001G118400 Sobic002G331800--Sobic001G118400 Sobic002G331800--Sobic001G450600 Sobic003G125900 Sobic003G125900 Sobic002G331800--Sobic003G125900 Sobic002G331800--Sobic003G245800 Sobic010G056300 Sobic010G056300 Sobic001G535700--Sobic010G056300 Sobic010G208800 Sobic010G208800 Sobic001G535700--Sobic010G208800 Sobic001G535700--Sobic001G128600 Sobic001G535700--Sobic001G283700 Sobic010G201600 Sobic010G201600 Sobic001G535700--Sobic010G201600 Sobic001G535700--Sobic002G331800 Sobic001G535700--Sobic001G118400 Sobic003G342200 Sobic003G342200 Sobic001G535700--Sobic003G342200 Sobic004G165900 Sobic004G165900 Sobic001G535700--Sobic004G165900
Octagon: transcription factors


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