Gene annotation
Transcriptome id Sobic.001G121700.1
Synonym Sb01g010700
Functional annotation expressed protein
UniProt Q8SAA9
Pfam PF11250
Panther DB PTHR33155 PTHR33155:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22090 : Protein of unknown function (DUF3049)
RAP-DB (Rice) LOC_Os03g49830.1 : expressed protein
MaizeGDB (Corn) Zm00025a017033 , Zm00025a007778
Brachypodium KQK13573
Barley HORVU1Hr1G094010.1 , HORVU1Hr1G094010.2 , HORVU5Hr1G000520.1 , HORVU5Hr1G000520.2 , HORVU4Hr1G006790.2 , HORVU6Hr1G045050.1 , HORVU4Hr1G006790.1 , HORVU5Hr1G000510.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G121700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G151500 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
2 Sobic.002G222700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
3 Sobic.004G221300 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
4 Sobic.001G397500 AMP-binding enzyme, putative, expressed -
5 Sobic.003G157700 expressed protein -
6 Sobic.007G018100 no apical meristem protein, putative, expressed -
7 Sobic.002G233500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.010G229600 expressed protein -
9 Sobic.008G110200 OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
10 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
11 Sobic.010G187500 CRAL/TRIO domain containing protein, expressed -
12 Sobic.004G136600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
13 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
14 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
15 Sobic.003G075000 expressed protein -
16 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
17 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.010G179900 transferase family protein, putative, expressed -
19 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic001G121700 Sobic001G121700 Sobic006G151500 Sobic006G151500 Sobic001G121700--Sobic006G151500 Sobic002G222700 Sobic002G222700 Sobic001G121700--Sobic002G222700 Sobic004G221300 Sobic004G221300 Sobic001G121700--Sobic004G221300 Sobic001G397500 Sobic001G397500 Sobic001G121700--Sobic001G397500 Sobic003G157700 Sobic003G157700 Sobic001G121700--Sobic003G157700 Sobic007G018100 Sobic007G018100 Sobic001G121700--Sobic007G018100 Sobic002G233500 Sobic002G233500 Sobic001G121700--Sobic002G233500 Sobic010G229600 Sobic010G229600 Sobic001G121700--Sobic010G229600 Sobic008G110200 Sobic008G110200 Sobic001G121700--Sobic008G110200 Sobic002G173500 Sobic002G173500 Sobic006G151500--Sobic002G173500 Sobic005G069000 Sobic005G069000 Sobic006G151500--Sobic005G069000 Sobic005G202800 Sobic005G202800 Sobic006G151500--Sobic005G202800 Sobic010G187500 Sobic010G187500 Sobic006G151500--Sobic010G187500 Sobic003G075566 Sobic003G075566 Sobic006G151500--Sobic003G075566 Sobic008G008801 Sobic008G008801 Sobic006G151500--Sobic008G008801 Sobic001G327900 Sobic001G327900 Sobic006G151500--Sobic001G327900 Sobic003G023600 Sobic003G023600 Sobic006G151500--Sobic003G023600 Sobic005G110541 Sobic005G110541 Sobic006G151500--Sobic005G110541 Sobic007G194700 Sobic007G194700 Sobic002G222700--Sobic007G194700 Sobic010G091600 Sobic010G091600 Sobic002G222700--Sobic010G091600 Sobic002G222700--Sobic001G121700 Sobic008G043700 Sobic008G043700 Sobic002G222700--Sobic008G043700 Sobic006G100600 Sobic006G100600 Sobic002G222700--Sobic006G100600 Sobic004G162000 Sobic004G162000 Sobic002G222700--Sobic004G162000 Sobic006G263300 Sobic006G263300 Sobic002G222700--Sobic006G263300 Sobic003G043150 Sobic003G043150 Sobic002G222700--Sobic003G043150 Sobic001G447400 Sobic001G447400 Sobic002G222700--Sobic001G447400 Sobic001G360800 Sobic001G360800 Sobic004G221300--Sobic001G360800 Sobic009G034300 Sobic009G034300 Sobic004G221300--Sobic009G034300 Sobic001G409100 Sobic001G409100 Sobic004G221300--Sobic001G409100 Sobic003G410800 Sobic003G410800 Sobic004G221300--Sobic003G410800 Sobic003G296400 Sobic003G296400 Sobic004G221300--Sobic003G296400 Sobic004G221300--Sobic008G110200 Sobic001G224300 Sobic001G224300 Sobic004G221300--Sobic001G224300 Sobic009G220100 Sobic009G220100 Sobic004G221300--Sobic009G220100 Sobic006G036400 Sobic006G036400 Sobic004G221300--Sobic006G036400 Sobic004G337925 Sobic004G337925 Sobic001G397500--Sobic004G337925 Sobic004G136600 Sobic004G136600 Sobic001G397500--Sobic004G136600 Sobic003G215200 Sobic003G215200 Sobic001G397500--Sobic003G215200 Sobic001G451500 Sobic001G451500 Sobic001G397500--Sobic001G451500 Sobic006G254100 Sobic006G254100 Sobic001G397500--Sobic006G254100 Sobic003G327900 Sobic003G327900 Sobic001G397500--Sobic003G327900 Sobic006G011400 Sobic006G011400 Sobic001G397500--Sobic006G011400 Sobic005G026600 Sobic005G026600 Sobic001G397500--Sobic005G026600 Sobic003G184100 Sobic003G184100 Sobic001G397500--Sobic003G184100 Sobic002G415000 Sobic002G415000 Sobic003G157700--Sobic002G415000 Sobic001G261460 Sobic001G261460 Sobic003G157700--Sobic001G261460 Sobic005G061200 Sobic005G061200 Sobic003G157700--Sobic005G061200 Sobic003G206700 Sobic003G206700 Sobic003G157700--Sobic003G206700 Sobic007G047300 Sobic007G047300 Sobic003G157700--Sobic007G047300 Sobic010G047600 Sobic010G047600 Sobic003G157700--Sobic010G047600 Sobic009G008800 Sobic009G008800 Sobic003G157700--Sobic009G008800 Sobic001G059500 Sobic001G059500 Sobic003G157700--Sobic001G059500 Sobic001G360700 Sobic001G360700 Sobic003G157700--Sobic001G360700 Sobic006G149300 Sobic006G149300 Sobic007G018100--Sobic006G149300 Sobic003G052900 Sobic003G052900 Sobic007G018100--Sobic003G052900 Sobic003G247600 Sobic003G247600 Sobic007G018100--Sobic003G247600 Sobic008G113900 Sobic008G113900 Sobic007G018100--Sobic008G113900 Sobic004G030300 Sobic004G030300 Sobic007G018100--Sobic004G030300 Sobic007G208100 Sobic007G208100 Sobic007G018100--Sobic007G208100 Sobic005G231300 Sobic005G231300 Sobic007G018100--Sobic005G231300 Sobic006G030200 Sobic006G030200 Sobic007G018100--Sobic006G030200 Sobic010G131400 Sobic010G131400 Sobic007G018100--Sobic010G131400 Sobic002G396400 Sobic002G396400 Sobic002G233500--Sobic002G396400 Sobic001G038300 Sobic001G038300 Sobic002G233500--Sobic001G038300 Sobic001G475500 Sobic001G475500 Sobic002G233500--Sobic001G475500 Sobic005G004700 Sobic005G004700 Sobic002G233500--Sobic005G004700 Sobic001G434300 Sobic001G434300 Sobic002G233500--Sobic001G434300 Sobic001G107100 Sobic001G107100 Sobic002G233500--Sobic001G107100 Sobic002G173200 Sobic002G173200 Sobic002G233500--Sobic002G173200 Sobic003G117500 Sobic003G117500 Sobic002G233500--Sobic003G117500 Sobic001G112100 Sobic001G112100 Sobic002G233500--Sobic001G112100 Sobic001G215500 Sobic001G215500 Sobic010G229600--Sobic001G215500 Sobic004G182500 Sobic004G182500 Sobic010G229600--Sobic004G182500 Sobic008G093200 Sobic008G093200 Sobic010G229600--Sobic008G093200 Sobic007G170900 Sobic007G170900 Sobic010G229600--Sobic007G170900 Sobic001G296400 Sobic001G296400 Sobic010G229600--Sobic001G296400 Sobic003G216500 Sobic003G216500 Sobic010G229600--Sobic003G216500 Sobic002G241500 Sobic002G241500 Sobic010G229600--Sobic002G241500 Sobic006G281200 Sobic006G281200 Sobic010G229600--Sobic006G281200 Sobic010G229600--Sobic006G100600 Sobic008G110200--Sobic004G221300 Sobic008G110200--Sobic001G409100 Sobic008G110200--Sobic001G038300 Sobic010G180100 Sobic010G180100 Sobic008G110200--Sobic010G180100 Sobic009G048000 Sobic009G048000 Sobic008G110200--Sobic009G048000 Sobic006G148800 Sobic006G148800 Sobic008G110200--Sobic006G148800 Sobic001G418100 Sobic001G418100 Sobic008G110200--Sobic001G418100 Sobic008G141200 Sobic008G141200 Sobic008G110200--Sobic008G141200 Sobic009G016100 Sobic009G016100 Sobic008G110200--Sobic009G016100
Octagon: transcription factors


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