Gene annotation
Transcriptome id Sobic.010G229600.1
Synonym Sb10g027250
Functional annotation expressed protein
UniProt C5Z7U8
Pfam PF09446
Panther DB PTHR31792
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05780 : Vacuolar ATPase assembly integral membrane protein VMA21-like domain
RAP-DB (Rice) LOC_Os04g52300.1 : expressed protein
MaizeGDB (Corn) Zm00025a009820
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G215500 expressed protein -
2 Sobic.004G182500 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed K18121: glyoxylate/succinic semialdehyde reductase
3 Sobic.008G093200 expressed protein -
4 Sobic.007G170900 histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
5 Sobic.001G296400 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
6 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
7 Sobic.002G241500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
8 Sobic.006G281200 csAtPR5, putative, expressed -
9 Sobic.006G100600 histone H3, putative, expressed K11253: histone H3
10 Sobic.004G225300 e2f-associated phosphoprotein, putative, expressed -
11 Sobic.001G290700 AGAP003819-PA, putative, expressed K09008: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
12 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
13 Sobic.002G228200 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.001G261577 - -
15 Sobic.007G052700 acyl CoA binding protein, putative, expressed K08762: DBI, diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
16 Sobic.009G207100 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
17 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
18 Sobic.006G104100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
19 Sobic.010G026925 - K01689: ENO, enolase
20 Sobic.001G039800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic010G229600 Sobic010G229600 Sobic001G215500 Sobic001G215500 Sobic010G229600--Sobic001G215500 Sobic004G182500 Sobic004G182500 Sobic010G229600--Sobic004G182500 Sobic008G093200 Sobic008G093200 Sobic010G229600--Sobic008G093200 Sobic007G170900 Sobic007G170900 Sobic010G229600--Sobic007G170900 Sobic001G296400 Sobic001G296400 Sobic010G229600--Sobic001G296400 Sobic003G216500 Sobic003G216500 Sobic010G229600--Sobic003G216500 Sobic002G241500 Sobic002G241500 Sobic010G229600--Sobic002G241500 Sobic006G281200 Sobic006G281200 Sobic010G229600--Sobic006G281200 Sobic006G100600 Sobic006G100600 Sobic010G229600--Sobic006G100600 Sobic009G207100 Sobic009G207100 Sobic001G215500--Sobic009G207100 Sobic004G006700 Sobic004G006700 Sobic001G215500--Sobic004G006700 Sobic001G215500--Sobic008G093200 Sobic010G224900 Sobic010G224900 Sobic001G215500--Sobic010G224900 Sobic001G215500--Sobic004G182500 Sobic004G027000 Sobic004G027000 Sobic001G215500--Sobic004G027000 Sobic001G202400 Sobic001G202400 Sobic001G215500--Sobic001G202400 Sobic004G225300 Sobic004G225300 Sobic001G215500--Sobic004G225300 Sobic006G195400 Sobic006G195400 Sobic001G215500--Sobic006G195400 Sobic004G182500--Sobic003G216500 Sobic003G103400 Sobic003G103400 Sobic004G182500--Sobic003G103400 Sobic002G073800 Sobic002G073800 Sobic004G182500--Sobic002G073800 Sobic004G182500--Sobic008G093200 Sobic010G258500 Sobic010G258500 Sobic004G182500--Sobic010G258500 Sobic001G376700 Sobic001G376700 Sobic004G182500--Sobic001G376700 Sobic004G182500--Sobic006G281200 Sobic003G325500 Sobic003G325500 Sobic004G182500--Sobic003G325500 Sobic004G182500--Sobic001G215500 Sobic005G105500 Sobic005G105500 Sobic008G093200--Sobic005G105500 Sobic001G096100 Sobic001G096100 Sobic008G093200--Sobic001G096100 Sobic008G093200--Sobic003G103400 Sobic003G028100 Sobic003G028100 Sobic008G093200--Sobic003G028100 Sobic001G196100 Sobic001G196100 Sobic008G093200--Sobic001G196100 Sobic009G258600 Sobic009G258600 Sobic008G093200--Sobic009G258600 Sobic001G431700 Sobic001G431700 Sobic008G093200--Sobic001G431700 Sobic006G002201 Sobic006G002201 Sobic008G093200--Sobic006G002201 Sobic008G018000 Sobic008G018000 Sobic008G093200--Sobic008G018000 Sobic007G186800 Sobic007G186800 Sobic007G170900--Sobic007G186800 Sobic005G033200 Sobic005G033200 Sobic007G170900--Sobic005G033200 Sobic001G428100 Sobic001G428100 Sobic007G170900--Sobic001G428100 Sobic002G428200 Sobic002G428200 Sobic007G170900--Sobic002G428200 Sobic004G130100 Sobic004G130100 Sobic007G170900--Sobic004G130100 Sobic007G170900--Sobic003G103400 Sobic003G113800 Sobic003G113800 Sobic007G170900--Sobic003G113800 Sobic007G152400 Sobic007G152400 Sobic007G170900--Sobic007G152400 Sobic009G005900 Sobic009G005900 Sobic007G170900--Sobic009G005900 Sobic003G071600 Sobic003G071600 Sobic001G296400--Sobic003G071600 Sobic004G175600 Sobic004G175600 Sobic001G296400--Sobic004G175600 Sobic004G208600 Sobic004G208600 Sobic001G296400--Sobic004G208600 Sobic006G216000 Sobic006G216000 Sobic001G296400--Sobic006G216000 Sobic001G063800 Sobic001G063800 Sobic001G296400--Sobic001G063800 Sobic003G420900 Sobic003G420900 Sobic001G296400--Sobic003G420900 Sobic007G171950 Sobic007G171950 Sobic001G296400--Sobic007G171950 Sobic008G173000 Sobic008G173000 Sobic001G296400--Sobic008G173000 Sobic001G384800 Sobic001G384800 Sobic001G296400--Sobic001G384800 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic002G241500--Sobic006G281200 Sobic010G001800 Sobic010G001800 Sobic002G241500--Sobic010G001800 Sobic010G159100 Sobic010G159100 Sobic002G241500--Sobic010G159100 Sobic003G003000 Sobic003G003000 Sobic002G241500--Sobic003G003000 Sobic003G283300 Sobic003G283300 Sobic002G241500--Sobic003G283300 Sobic002G361900 Sobic002G361900 Sobic002G241500--Sobic002G361900 Sobic006G181700 Sobic006G181700 Sobic002G241500--Sobic006G181700 Sobic008G127500 Sobic008G127500 Sobic002G241500--Sobic008G127500 Sobic001G110300 Sobic001G110300 Sobic002G241500--Sobic001G110300 Sobic006G281200--Sobic001G428100 Sobic006G281200--Sobic003G003000 Sobic001G025600 Sobic001G025600 Sobic006G281200--Sobic001G025600 Sobic009G131100 Sobic009G131100 Sobic006G281200--Sobic009G131100 Sobic007G091000 Sobic007G091000 Sobic006G281200--Sobic007G091000 Sobic001G404100 Sobic001G404100 Sobic006G281200--Sobic001G404100 Sobic008G100000 Sobic008G100000 Sobic006G281200--Sobic008G100000 Sobic003G367900 Sobic003G367900 Sobic006G281200--Sobic003G367900 Sobic009G130400 Sobic009G130400 Sobic006G281200--Sobic009G130400 Sobic008G073300 Sobic008G073300 Sobic006G100600--Sobic008G073300 Sobic004G236300 Sobic004G236300 Sobic006G100600--Sobic004G236300 Sobic006G100600--Sobic004G130100 Sobic002G371100 Sobic002G371100 Sobic006G100600--Sobic002G371100 Sobic003G440800 Sobic003G440800 Sobic006G100600--Sobic003G440800 Sobic002G255200 Sobic002G255200 Sobic006G100600--Sobic002G255200 Sobic001G128400 Sobic001G128400 Sobic006G100600--Sobic001G128400 Sobic003G386100 Sobic003G386100 Sobic006G100600--Sobic003G386100 Sobic006G232200 Sobic006G232200 Sobic006G100600--Sobic006G232200
Octagon: transcription factors


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