Gene annotation
Transcriptome id Sobic.008G093200.1
Synonym Sb08g013180
Functional annotation expressed protein
UniProt A0A1Z5R5V1
Pfam PF15249
Panther DB PTHR15572
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17510 : -
RAP-DB (Rice) LOC_Os12g27994.2 : expressed protein
MaizeGDB (Corn) Zm00025a024873
Brachypodium KQJ86774
Barley -
Wheat TraesCS5A02G107200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G105500 expressed protein -
2 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.003G103400 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
4 Sobic.003G028100 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
5 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
6 Sobic.009G258600 LSM domain containing protein, expressed K12627: U6 snRNA-associated Sm-like protein LSm8
7 Sobic.001G431700 expressed protein K18171: COX assembly mitochondrial protein 1
8 Sobic.006G002201 - -
9 Sobic.008G018000 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
10 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta
11 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
12 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
13 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
14 Sobic.009G012700 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
15 Sobic.006G281200 csAtPR5, putative, expressed -
16 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
17 Sobic.002G254500 oxidoreductase, putative, expressed K18160: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
18 Sobic.004G182500 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed K18121: glyoxylate/succinic semialdehyde reductase
19 Sobic.002G045100 LSM domain containing protein, expressed K11086: SNRPB, small nuclear ribonucleoprotein B and B'
20 Sobic.002G313600 src homology-3 domain protein 3, putative, expressed -


Gene co-expression network
sample Sobic008G093200 Sobic008G093200 Sobic005G105500 Sobic005G105500 Sobic008G093200--Sobic005G105500 Sobic001G096100 Sobic001G096100 Sobic008G093200--Sobic001G096100 Sobic003G103400 Sobic003G103400 Sobic008G093200--Sobic003G103400 Sobic003G028100 Sobic003G028100 Sobic008G093200--Sobic003G028100 Sobic001G196100 Sobic001G196100 Sobic008G093200--Sobic001G196100 Sobic009G258600 Sobic009G258600 Sobic008G093200--Sobic009G258600 Sobic001G431700 Sobic001G431700 Sobic008G093200--Sobic001G431700 Sobic006G002201 Sobic006G002201 Sobic008G093200--Sobic006G002201 Sobic008G018000 Sobic008G018000 Sobic008G093200--Sobic008G018000 Sobic001G281900 Sobic001G281900 Sobic005G105500--Sobic001G281900 Sobic001G458700 Sobic001G458700 Sobic005G105500--Sobic001G458700 Sobic002G341800 Sobic002G341800 Sobic005G105500--Sobic002G341800 Sobic001G145500 Sobic001G145500 Sobic005G105500--Sobic001G145500 Sobic005G105500--Sobic001G096100 Sobic006G211800 Sobic006G211800 Sobic005G105500--Sobic006G211800 Sobic007G176200 Sobic007G176200 Sobic005G105500--Sobic007G176200 Sobic003G330500 Sobic003G330500 Sobic005G105500--Sobic003G330500 Sobic005G105500--Sobic006G002201 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic004G138800 Sobic004G138800 Sobic001G096100--Sobic004G138800 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic004G224900 Sobic004G224900 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G481700 Sobic001G481700 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic003G103400--Sobic006G002201 Sobic003G103400--Sobic008G093200 Sobic003G216500 Sobic003G216500 Sobic003G103400--Sobic003G216500 Sobic010G013900 Sobic010G013900 Sobic003G103400--Sobic010G013900 Sobic003G103400--Sobic005G105500 Sobic003G103400--Sobic003G028100 Sobic004G182500 Sobic004G182500 Sobic003G103400--Sobic004G182500 Sobic003G103400--Sobic001G096100 Sobic009G168000 Sobic009G168000 Sobic003G103400--Sobic009G168000 Sobic009G212300 Sobic009G212300 Sobic003G028100--Sobic009G212300 Sobic009G234400 Sobic009G234400 Sobic003G028100--Sobic009G234400 Sobic003G028100--Sobic001G096100 Sobic003G028100--Sobic003G196800 Sobic006G079900 Sobic006G079900 Sobic003G028100--Sobic006G079900 Sobic007G217400 Sobic007G217400 Sobic003G028100--Sobic007G217400 Sobic003G028100--Sobic010G013900 Sobic002G331300 Sobic002G331300 Sobic003G028100--Sobic002G331300 Sobic001G404100 Sobic001G404100 Sobic003G028100--Sobic001G404100 Sobic001G116000 Sobic001G116000 Sobic001G196100--Sobic001G116000 Sobic007G044400 Sobic007G044400 Sobic001G196100--Sobic007G044400 Sobic001G196100--Sobic001G281900 Sobic001G035400 Sobic001G035400 Sobic001G196100--Sobic001G035400 Sobic001G418000 Sobic001G418000 Sobic001G196100--Sobic001G418000 Sobic002G087000 Sobic002G087000 Sobic001G196100--Sobic002G087000 Sobic003G319000 Sobic003G319000 Sobic001G196100--Sobic003G319000 Sobic003G322300 Sobic003G322300 Sobic001G196100--Sobic003G322300 Sobic001G530800 Sobic001G530800 Sobic001G196100--Sobic001G530800 Sobic003G127700 Sobic003G127700 Sobic009G258600--Sobic003G127700 Sobic010G210000 Sobic010G210000 Sobic009G258600--Sobic010G210000 Sobic003G367900 Sobic003G367900 Sobic009G258600--Sobic003G367900 Sobic009G258600--Sobic003G028100 Sobic009G012700 Sobic009G012700 Sobic009G258600--Sobic009G012700 Sobic004G137900 Sobic004G137900 Sobic009G258600--Sobic004G137900 Sobic009G258600--Sobic002G331300 Sobic009G258600--Sobic001G096100 Sobic003G190800 Sobic003G190800 Sobic009G258600--Sobic003G190800 Sobic001G431700--Sobic008G018000 Sobic001G431700--Sobic009G012700 Sobic001G431700--Sobic006G079900 Sobic003G287300 Sobic003G287300 Sobic001G431700--Sobic003G287300 Sobic010G018000 Sobic010G018000 Sobic001G431700--Sobic010G018000 Sobic001G431700--Sobic008G093200 Sobic001G431700--Sobic010G013900 Sobic006G052400 Sobic006G052400 Sobic001G431700--Sobic006G052400 Sobic002G371200 Sobic002G371200 Sobic001G431700--Sobic002G371200 Sobic006G002201--Sobic003G103400 Sobic007G061400 Sobic007G061400 Sobic006G002201--Sobic007G061400 Sobic006G002201--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G002201--Sobic004G291400 Sobic005G111900 Sobic005G111900 Sobic006G002201--Sobic005G111900 Sobic006G002201--Sobic003G196800 Sobic001G468600 Sobic001G468600 Sobic006G002201--Sobic001G468600 Sobic006G002201--Sobic001G458700 Sobic004G124100 Sobic004G124100 Sobic006G002201--Sobic004G124100 Sobic008G018000--Sobic001G431700 Sobic008G018000--Sobic003G287300 Sobic008G018000--Sobic006G079900 Sobic008G018000--Sobic008G093200 Sobic008G018000--Sobic006G052400 Sobic004G138300 Sobic004G138300 Sobic008G018000--Sobic004G138300 Sobic008G018000--Sobic003G028100 Sobic008G018000--Sobic009G012700 Sobic008G018000--Sobic003G367900
Octagon: transcription factors


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