Gene annotation
Transcriptome id Sobic.008G018000.1
Synonym TIM8, Sb08g001560
Functional annotation mitochondrial import inner membrane translocase subunit Tim, putative, expressed
UniProt C5YQN7
Pfam PF02953
Panther DB -
NCBI CDD KOG3489; Mitochondrial import inner membrane translocase, subunit TIM8
KEGG Orthology K17780; mitochondrial import inner membrane translocase subunit TIM8
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50810 : translocase inner membrane subunit 8
RAP-DB (Rice) LOC_Os11g03710.1 : mitochondrial import inner membrane translocase subunit Tim, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G431700 expressed protein K18171: COX assembly mitochondrial protein 1
2 Sobic.003G287300 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
3 Sobic.006G079900 COP9 signalosome complex subunit 8, putative, expressed K12181: COPS8, COP9 signalosome complex subunit 8
4 Sobic.008G093200 expressed protein -
5 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
6 Sobic.004G138300 expressed protein -
7 Sobic.003G028100 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
8 Sobic.009G012700 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
9 Sobic.003G367900 LSM domain containing protein, expressed K12622: U6 snRNA-associated Sm-like protein LSm3
10 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
11 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
12 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
13 Sobic.005G105500 expressed protein -
14 Sobic.007G024800 expressed protein -
15 Sobic.007G191800 expressed protein -
16 Sobic.003G442400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
17 Sobic.010G018000 39S ribosomal protein L47, mitochondrial precursor, putative, expressed K17428: MRPL47, large subunit ribosomal protein L47
18 Sobic.009G161200 membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.004G336600 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
20 Sobic.004G184000 SFT2, putative, expressed -


Gene co-expression network
sample Sobic008G018000 Sobic008G018000 Sobic001G431700 Sobic001G431700 Sobic008G018000--Sobic001G431700 Sobic003G287300 Sobic003G287300 Sobic008G018000--Sobic003G287300 Sobic006G079900 Sobic006G079900 Sobic008G018000--Sobic006G079900 Sobic008G093200 Sobic008G093200 Sobic008G018000--Sobic008G093200 Sobic006G052400 Sobic006G052400 Sobic008G018000--Sobic006G052400 Sobic004G138300 Sobic004G138300 Sobic008G018000--Sobic004G138300 Sobic003G028100 Sobic003G028100 Sobic008G018000--Sobic003G028100 Sobic009G012700 Sobic009G012700 Sobic008G018000--Sobic009G012700 Sobic003G367900 Sobic003G367900 Sobic008G018000--Sobic003G367900 Sobic001G431700--Sobic008G018000 Sobic001G431700--Sobic009G012700 Sobic001G431700--Sobic006G079900 Sobic001G431700--Sobic003G287300 Sobic010G018000 Sobic010G018000 Sobic001G431700--Sobic010G018000 Sobic001G431700--Sobic008G093200 Sobic010G013900 Sobic010G013900 Sobic001G431700--Sobic010G013900 Sobic001G431700--Sobic006G052400 Sobic002G371200 Sobic002G371200 Sobic001G431700--Sobic002G371200 Sobic001G025600 Sobic001G025600 Sobic003G287300--Sobic001G025600 Sobic003G160900 Sobic003G160900 Sobic003G287300--Sobic003G160900 Sobic001G481700 Sobic001G481700 Sobic003G287300--Sobic001G481700 Sobic001G096100 Sobic001G096100 Sobic003G287300--Sobic001G096100 Sobic004G342400 Sobic004G342400 Sobic003G287300--Sobic004G342400 Sobic008G073300 Sobic008G073300 Sobic003G287300--Sobic008G073300 Sobic003G442400 Sobic003G442400 Sobic003G287300--Sobic003G442400 Sobic002G371100 Sobic002G371100 Sobic003G287300--Sobic002G371100 Sobic010G023900 Sobic010G023900 Sobic003G287300--Sobic010G023900 Sobic007G217400 Sobic007G217400 Sobic006G079900--Sobic007G217400 Sobic009G124400 Sobic009G124400 Sobic006G079900--Sobic009G124400 Sobic003G190800 Sobic003G190800 Sobic006G079900--Sobic003G190800 Sobic002G331300 Sobic002G331300 Sobic006G079900--Sobic002G331300 Sobic006G079900--Sobic003G028100 Sobic001G542900 Sobic001G542900 Sobic006G079900--Sobic001G542900 Sobic006G079900--Sobic001G431700 Sobic006G079900--Sobic003G367900 Sobic001G404100 Sobic001G404100 Sobic006G079900--Sobic001G404100 Sobic005G105500 Sobic005G105500 Sobic008G093200--Sobic005G105500 Sobic008G093200--Sobic001G096100 Sobic003G103400 Sobic003G103400 Sobic008G093200--Sobic003G103400 Sobic008G093200--Sobic003G028100 Sobic001G196100 Sobic001G196100 Sobic008G093200--Sobic001G196100 Sobic009G258600 Sobic009G258600 Sobic008G093200--Sobic009G258600 Sobic008G093200--Sobic001G431700 Sobic006G002201 Sobic006G002201 Sobic008G093200--Sobic006G002201 Sobic008G093200--Sobic008G018000 Sobic008G058300 Sobic008G058300 Sobic006G052400--Sobic008G058300 Sobic001G058900 Sobic001G058900 Sobic006G052400--Sobic001G058900 Sobic009G050200 Sobic009G050200 Sobic006G052400--Sobic009G050200 Sobic006G052400--Sobic001G096100 Sobic006G115000 Sobic006G115000 Sobic006G052400--Sobic006G115000 Sobic001G225700 Sobic001G225700 Sobic006G052400--Sobic001G225700 Sobic006G052400--Sobic003G442400 Sobic003G018600 Sobic003G018600 Sobic006G052400--Sobic003G018600 Sobic009G117000 Sobic009G117000 Sobic006G052400--Sobic009G117000 Sobic006G203900 Sobic006G203900 Sobic004G138300--Sobic006G203900 Sobic008G136800 Sobic008G136800 Sobic004G138300--Sobic008G136800 Sobic003G238500 Sobic003G238500 Sobic004G138300--Sobic003G238500 Sobic009G001900 Sobic009G001900 Sobic004G138300--Sobic009G001900 Sobic004G262300 Sobic004G262300 Sobic004G138300--Sobic004G262300 Sobic009G211900 Sobic009G211900 Sobic004G138300--Sobic009G211900 Sobic003G074900 Sobic003G074900 Sobic004G138300--Sobic003G074900 Sobic003G322300 Sobic003G322300 Sobic004G138300--Sobic003G322300 Sobic006G124300 Sobic006G124300 Sobic004G138300--Sobic006G124300 Sobic009G212300 Sobic009G212300 Sobic003G028100--Sobic009G212300 Sobic009G234400 Sobic009G234400 Sobic003G028100--Sobic009G234400 Sobic003G028100--Sobic001G096100 Sobic003G196800 Sobic003G196800 Sobic003G028100--Sobic003G196800 Sobic003G028100--Sobic006G079900 Sobic003G028100--Sobic007G217400 Sobic003G028100--Sobic010G013900 Sobic003G028100--Sobic002G331300 Sobic003G028100--Sobic001G404100 Sobic008G149450 Sobic008G149450 Sobic009G012700--Sobic008G149450 Sobic009G012700--Sobic004G342400 Sobic009G012700--Sobic006G115000 Sobic002G045100 Sobic002G045100 Sobic009G012700--Sobic002G045100 Sobic009G012700--Sobic003G287300 Sobic010G210000 Sobic010G210000 Sobic009G012700--Sobic010G210000 Sobic009G012700--Sobic010G023900 Sobic003G011100 Sobic003G011100 Sobic009G012700--Sobic003G011100 Sobic004G002350 Sobic004G002350 Sobic009G012700--Sobic004G002350 Sobic003G367900--Sobic001G404100 Sobic003G367900--Sobic006G052400 Sobic003G367900--Sobic001G096100 Sobic006G281200 Sobic006G281200 Sobic003G367900--Sobic006G281200 Sobic003G127700 Sobic003G127700 Sobic003G367900--Sobic003G127700 Sobic003G367900--Sobic002G331300 Sobic004G175700 Sobic004G175700 Sobic003G367900--Sobic004G175700 Sobic003G367900--Sobic009G258600 Sobic008G100000 Sobic008G100000 Sobic003G367900--Sobic008G100000
Octagon: transcription factors


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