Gene annotation
Transcriptome id Sobic.007G024800.2,Sobic.007G024800.1,Sobic.007G024800.3
Synonym Sb07g002170
Functional annotation expressed protein
UniProt A0A1B6PF55 , C5YMJ0
Pfam -
Panther DB PTHR33156 PTHR33156:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39300 : -
RAP-DB (Rice) LOC_Os01g37090.1 : expressed protein
MaizeGDB (Corn) Zm00025a040322 , Zm00025a057354
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
2 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
3 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
4 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
5 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
6 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
7 Sobic.005G105500 expressed protein -
8 Sobic.010G008800 defender against cell death 1, putative, expressed K12668: OST2, oligosaccharyltransferase complex subunit epsilon
9 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
10 Sobic.003G330500 peptidase, T1 family, putative, expressed -
11 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
12 Sobic.002G255100 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
13 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
14 Sobic.003G351000 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
15 Sobic.007G191800 expressed protein -
16 Sobic.009G212300 eukaryotic translation initiation factor 3 subunit F, putative, expressed K03249: translation initiation factor 3 subunit F
17 Sobic.006G017100 ribosomal L18p/L5e family protein, putative, expressed -
18 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
19 Sobic.008G084600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
20 Sobic.003G308000 expressed protein K15902: PCC1, EKC/KEOPS complex subunit PCC1/LAGE3


Gene co-expression network
sample Sobic007G024800 Sobic007G024800 Sobic007G092100 Sobic007G092100 Sobic007G024800--Sobic007G092100 Sobic003G170300 Sobic003G170300 Sobic007G024800--Sobic003G170300 Sobic001G096100 Sobic001G096100 Sobic007G024800--Sobic001G096100 Sobic002G180300 Sobic002G180300 Sobic007G024800--Sobic002G180300 Sobic001G035400 Sobic001G035400 Sobic007G024800--Sobic001G035400 Sobic006G035900 Sobic006G035900 Sobic007G024800--Sobic006G035900 Sobic005G105500 Sobic005G105500 Sobic007G024800--Sobic005G105500 Sobic010G008800 Sobic010G008800 Sobic007G024800--Sobic010G008800 Sobic003G261100 Sobic003G261100 Sobic007G024800--Sobic003G261100 Sobic004G066800 Sobic004G066800 Sobic007G092100--Sobic004G066800 Sobic001G057300 Sobic001G057300 Sobic007G092100--Sobic001G057300 Sobic001G505500 Sobic001G505500 Sobic007G092100--Sobic001G505500 Sobic007G092100--Sobic001G035400 Sobic001G342200 Sobic001G342200 Sobic007G092100--Sobic001G342200 Sobic003G330500 Sobic003G330500 Sobic007G092100--Sobic003G330500 Sobic007G092100--Sobic001G096100 Sobic004G138800 Sobic004G138800 Sobic007G092100--Sobic004G138800 Sobic009G191200 Sobic009G191200 Sobic007G092100--Sobic009G191200 Sobic009G240700 Sobic009G240700 Sobic003G170300--Sobic009G240700 Sobic008G150300 Sobic008G150300 Sobic003G170300--Sobic008G150300 Sobic001G473400 Sobic001G473400 Sobic003G170300--Sobic001G473400 Sobic004G155100 Sobic004G155100 Sobic003G170300--Sobic004G155100 Sobic004G282700 Sobic004G282700 Sobic003G170300--Sobic004G282700 Sobic003G170300--Sobic002G180300 Sobic002G308300 Sobic002G308300 Sobic003G170300--Sobic002G308300 Sobic001G282500 Sobic001G282500 Sobic003G170300--Sobic001G282500 Sobic010G264300 Sobic010G264300 Sobic003G170300--Sobic010G264300 Sobic001G096100--Sobic004G066800 Sobic001G096100--Sobic004G138800 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic004G224900 Sobic004G224900 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G481700 Sobic001G481700 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic002G309700 Sobic002G309700 Sobic002G180300--Sobic002G309700 Sobic006G013000 Sobic006G013000 Sobic002G180300--Sobic006G013000 Sobic002G356400 Sobic002G356400 Sobic002G180300--Sobic002G356400 Sobic009G179100 Sobic009G179100 Sobic002G180300--Sobic009G179100 Sobic009G115700 Sobic009G115700 Sobic002G180300--Sobic009G115700 Sobic002G180300--Sobic010G264300 Sobic001G404800 Sobic001G404800 Sobic002G180300--Sobic001G404800 Sobic001G370700 Sobic001G370700 Sobic002G180300--Sobic001G370700 Sobic002G180300--Sobic002G308300 Sobic004G344800 Sobic004G344800 Sobic001G035400--Sobic004G344800 Sobic006G203900 Sobic006G203900 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic001G035400--Sobic007G092100 Sobic009G164700 Sobic009G164700 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G073600 Sobic001G073600 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G116000 Sobic001G116000 Sobic001G035400--Sobic001G116000 Sobic006G035900--Sobic001G057300 Sobic006G216600 Sobic006G216600 Sobic006G035900--Sobic006G216600 Sobic005G112800 Sobic005G112800 Sobic006G035900--Sobic005G112800 Sobic008G132400 Sobic008G132400 Sobic006G035900--Sobic008G132400 Sobic001G334300 Sobic001G334300 Sobic006G035900--Sobic001G334300 Sobic002G304900 Sobic002G304900 Sobic006G035900--Sobic002G304900 Sobic006G035900--Sobic010G264300 Sobic006G035900--Sobic003G261100 Sobic006G035900--Sobic001G370700 Sobic001G281900 Sobic001G281900 Sobic005G105500--Sobic001G281900 Sobic001G458700 Sobic001G458700 Sobic005G105500--Sobic001G458700 Sobic002G341800 Sobic002G341800 Sobic005G105500--Sobic002G341800 Sobic001G145500 Sobic001G145500 Sobic005G105500--Sobic001G145500 Sobic005G105500--Sobic001G096100 Sobic006G211800 Sobic006G211800 Sobic005G105500--Sobic006G211800 Sobic007G176200 Sobic007G176200 Sobic005G105500--Sobic007G176200 Sobic005G105500--Sobic003G330500 Sobic006G002201 Sobic006G002201 Sobic005G105500--Sobic006G002201 Sobic001G074700 Sobic001G074700 Sobic010G008800--Sobic001G074700 Sobic010G008800--Sobic001G342200 Sobic001G350600 Sobic001G350600 Sobic010G008800--Sobic001G350600 Sobic010G008800--Sobic006G013000 Sobic010G008800--Sobic004G066800 Sobic004G310300 Sobic004G310300 Sobic010G008800--Sobic004G310300 Sobic010G008800--Sobic009G115700 Sobic003G129800 Sobic003G129800 Sobic010G008800--Sobic003G129800 Sobic010G008800--Sobic001G505500 Sobic003G261100--Sobic001G370700 Sobic002G131600 Sobic002G131600 Sobic003G261100--Sobic002G131600 Sobic003G261100--Sobic001G057300 Sobic003G261100--Sobic006G035900 Sobic003G261100--Sobic009G115700 Sobic007G191600 Sobic007G191600 Sobic003G261100--Sobic007G191600 Sobic003G261100--Sobic004G155100 Sobic001G214900 Sobic001G214900 Sobic003G261100--Sobic001G214900 Sobic001G501600 Sobic001G501600 Sobic003G261100--Sobic001G501600
Octagon: transcription factors


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