Gene annotation
Transcriptome id Sobic.001G152700.1
Synonym Sb01g013250
Functional annotation expressed protein
UniProt C5WR40 , C6JRZ8
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g56900.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT73722 , KQK07658 , KQK11903
Barley -
Wheat TraesCS3B02G480200 , TraesCSU02G198300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G106200 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.001G043200 expressed protein -
3 Sobic.007G119700 OsFBX8 - F-box domain containing protein, expressed -
4 Sobic.009G040325 - -
5 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
6 Sobic.009G040250 - -
7 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
8 Sobic.006G012300 3-5 exonuclease domain-containing protein, putative, expressed -
9 Sobic.009G122500 expressed protein -
10 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
11 Sobic.009G252300 expressed protein -
12 Sobic.006G119900 zinc finger, ZZ type family protein, expressed K17987: next to BRCA1 gene 1 protein
13 Sobic.002G057400 expressed protein K16586: HAUS augmin-like complex subunit 3
14 Sobic.005G123400 expressed protein -
15 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
16 Sobic.006G220400 exonuclease, putative, expressed -
17 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
18 Sobic.002G108100 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.004G350700 kelch repeat protein, putative, expressed -
20 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S


Gene co-expression network
sample Sobic001G152700 Sobic001G152700 Sobic002G106200 Sobic002G106200 Sobic001G152700--Sobic002G106200 Sobic001G043200 Sobic001G043200 Sobic001G152700--Sobic001G043200 Sobic007G119700 Sobic007G119700 Sobic001G152700--Sobic007G119700 Sobic009G040325 Sobic009G040325 Sobic001G152700--Sobic009G040325 Sobic010G160300 Sobic010G160300 Sobic001G152700--Sobic010G160300 Sobic009G040250 Sobic009G040250 Sobic001G152700--Sobic009G040250 Sobic001G114200 Sobic001G114200 Sobic001G152700--Sobic001G114200 Sobic006G012300 Sobic006G012300 Sobic001G152700--Sobic006G012300 Sobic009G122500 Sobic009G122500 Sobic001G152700--Sobic009G122500 Sobic007G048900 Sobic007G048900 Sobic002G106200--Sobic007G048900 Sobic006G215800 Sobic006G215800 Sobic002G106200--Sobic006G215800 Sobic003G342500 Sobic003G342500 Sobic002G106200--Sobic003G342500 Sobic007G060100 Sobic007G060100 Sobic002G106200--Sobic007G060100 Sobic002G106200--Sobic001G152700 Sobic006G181500 Sobic006G181500 Sobic002G106200--Sobic006G181500 Sobic002G108100 Sobic002G108100 Sobic002G106200--Sobic002G108100 Sobic002G106200--Sobic010G160300 Sobic002G057400 Sobic002G057400 Sobic002G106200--Sobic002G057400 Sobic005G123400 Sobic005G123400 Sobic001G043200--Sobic005G123400 Sobic003G190200 Sobic003G190200 Sobic001G043200--Sobic003G190200 Sobic003G021600 Sobic003G021600 Sobic001G043200--Sobic003G021600 Sobic003G394500 Sobic003G394500 Sobic001G043200--Sobic003G394500 Sobic001G043200--Sobic009G122500 Sobic007G030100 Sobic007G030100 Sobic001G043200--Sobic007G030100 Sobic004G122900 Sobic004G122900 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic003G194800 Sobic003G194800 Sobic001G043200--Sobic003G194800 Sobic007G119700--Sobic001G152700 Sobic007G119700--Sobic010G160300 Sobic002G397900 Sobic002G397900 Sobic007G119700--Sobic002G397900 Sobic001G280500 Sobic001G280500 Sobic007G119700--Sobic001G280500 Sobic007G119700--Sobic001G043200 Sobic002G348400 Sobic002G348400 Sobic007G119700--Sobic002G348400 Sobic002G023100 Sobic002G023100 Sobic007G119700--Sobic002G023100 Sobic002G304700 Sobic002G304700 Sobic007G119700--Sobic002G304700 Sobic001G498800 Sobic001G498800 Sobic007G119700--Sobic001G498800 Sobic009G040325--Sobic009G040250 Sobic009G040325--Sobic003G021600 Sobic009G040325--Sobic001G043200 Sobic006G119900 Sobic006G119900 Sobic009G040325--Sobic006G119900 Sobic007G105700 Sobic007G105700 Sobic009G040325--Sobic007G105700 Sobic009G040325--Sobic006G012300 Sobic003G420400 Sobic003G420400 Sobic009G040325--Sobic003G420400 Sobic009G040325--Sobic007G030100 Sobic009G040325--Sobic003G394500 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic005G063200 Sobic005G063200 Sobic010G160300--Sobic005G063200 Sobic010G160300--Sobic001G114200 Sobic001G501900 Sobic001G501900 Sobic010G160300--Sobic001G501900 Sobic004G350700 Sobic004G350700 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic003G117800 Sobic003G117800 Sobic010G160300--Sobic003G117800 Sobic001G149000 Sobic001G149000 Sobic010G160300--Sobic001G149000 Sobic009G040250--Sobic009G040325 Sobic005G087300 Sobic005G087300 Sobic009G040250--Sobic005G087300 Sobic009G040250--Sobic003G021600 Sobic009G040250--Sobic006G012300 Sobic002G147200 Sobic002G147200 Sobic009G040250--Sobic002G147200 Sobic009G040250--Sobic010G160300 Sobic009G040250--Sobic001G043200 Sobic009G040250--Sobic002G304700 Sobic006G191000 Sobic006G191000 Sobic009G040250--Sobic006G191000 Sobic001G114200--Sobic004G350700 Sobic006G060000 Sobic006G060000 Sobic001G114200--Sobic006G060000 Sobic001G114200--Sobic010G160300 Sobic001G114200--Sobic003G117800 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G490900 Sobic001G490900 Sobic001G114200--Sobic001G490900 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic006G012300--Sobic009G040250 Sobic006G012300--Sobic007G105700 Sobic006G012300--Sobic003G420400 Sobic006G012300--Sobic006G119900 Sobic010G274800 Sobic010G274800 Sobic006G012300--Sobic010G274800 Sobic006G012300--Sobic009G040325 Sobic002G392400 Sobic002G392400 Sobic006G012300--Sobic002G392400 Sobic006G220400 Sobic006G220400 Sobic006G012300--Sobic006G220400 Sobic006G012300--Sobic005G087300 Sobic001G335000 Sobic001G335000 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000
Octagon: transcription factors


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