Gene annotation
Transcriptome id Sobic.001G164350.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5Z6
Pfam -
Panther DB PTHR35479 PTHR35479:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31490 : -
RAP-DB (Rice) LOC_Os01g53140.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G119800 arginyl-tRNA synthetase, putative, expressed -
2 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
3 Sobic.004G332000 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed K00736: alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
4 Sobic.007G178200 ER lumen protein retaining receptor, putative, expressed -
5 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
6 Sobic.002G270700 OsRhmbd16 - Putative Rhomboid homologue, expressed -
7 Sobic.001G525400 receptor-like protein kinase At3g46290 precursor, putative, expressed -
8 Sobic.002G380000 TRM112, putative, expressed K15448: TRM112, multifunctional methyltransferase subunit TRM112
9 Sobic.001G322900 HIT zinc finger domain containing protein, expressed -
10 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
11 Sobic.009G195900 OsFBT9 - F-box and tubby domain containing protein, expressed -
12 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
13 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
15 Sobic.001G430800 GA17271-PA, putative, expressed -
16 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
17 Sobic.005G122900 - -
18 Sobic.001G420700 clathrin assembly protein, putative, expressed -
19 Sobic.009G104000 ranBP1 domain containing protein, expressed K15306: Ran-binding protein 1
20 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi


Gene co-expression network
sample Sobic001G164350 Sobic001G164350 Sobic002G119800 Sobic002G119800 Sobic001G164350--Sobic002G119800 Sobic008G016900 Sobic008G016900 Sobic001G164350--Sobic008G016900 Sobic004G332000 Sobic004G332000 Sobic001G164350--Sobic004G332000 Sobic007G178200 Sobic007G178200 Sobic001G164350--Sobic007G178200 Sobic001G416600 Sobic001G416600 Sobic001G164350--Sobic001G416600 Sobic002G270700 Sobic002G270700 Sobic001G164350--Sobic002G270700 Sobic001G525400 Sobic001G525400 Sobic001G164350--Sobic001G525400 Sobic002G380000 Sobic002G380000 Sobic001G164350--Sobic002G380000 Sobic001G322900 Sobic001G322900 Sobic001G164350--Sobic001G322900 Sobic002G119800--Sobic004G332000 Sobic009G059700 Sobic009G059700 Sobic002G119800--Sobic009G059700 Sobic006G213601 Sobic006G213601 Sobic002G119800--Sobic006G213601 Sobic002G119800--Sobic008G016900 Sobic001G162100 Sobic001G162100 Sobic002G119800--Sobic001G162100 Sobic009G230700 Sobic009G230700 Sobic002G119800--Sobic009G230700 Sobic009G134600 Sobic009G134600 Sobic002G119800--Sobic009G134600 Sobic007G011000 Sobic007G011000 Sobic002G119800--Sobic007G011000 Sobic004G145200 Sobic004G145200 Sobic002G119800--Sobic004G145200 Sobic002G330300 Sobic002G330300 Sobic008G016900--Sobic002G330300 Sobic002G379400 Sobic002G379400 Sobic008G016900--Sobic002G379400 Sobic010G062800 Sobic010G062800 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic007G188100 Sobic007G188100 Sobic008G016900--Sobic007G188100 Sobic008G016900--Sobic004G145200 Sobic008G016900--Sobic001G162100 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500 Sobic004G332000--Sobic002G119800 Sobic004G332000--Sobic006G213601 Sobic001G262900 Sobic001G262900 Sobic004G332000--Sobic001G262900 Sobic001G072200 Sobic001G072200 Sobic004G332000--Sobic001G072200 Sobic003G374500 Sobic003G374500 Sobic004G332000--Sobic003G374500 Sobic006G255100 Sobic006G255100 Sobic004G332000--Sobic006G255100 Sobic004G152601 Sobic004G152601 Sobic004G332000--Sobic004G152601 Sobic007G136700 Sobic007G136700 Sobic004G332000--Sobic007G136700 Sobic002G067100 Sobic002G067100 Sobic004G332000--Sobic002G067100 Sobic003G392200 Sobic003G392200 Sobic007G178200--Sobic003G392200 Sobic007G178200--Sobic001G416600 Sobic004G025000 Sobic004G025000 Sobic007G178200--Sobic004G025000 Sobic007G178200--Sobic008G016900 Sobic003G361300 Sobic003G361300 Sobic007G178200--Sobic003G361300 Sobic007G178200--Sobic009G134600 Sobic004G245900 Sobic004G245900 Sobic007G178200--Sobic004G245900 Sobic007G178200--Sobic002G330300 Sobic010G071700 Sobic010G071700 Sobic007G178200--Sobic010G071700 Sobic001G416600--Sobic007G178200 Sobic001G416600--Sobic008G016900 Sobic001G409900 Sobic001G409900 Sobic001G416600--Sobic001G409900 Sobic002G362900 Sobic002G362900 Sobic001G416600--Sobic002G362900 Sobic001G416600--Sobic003G392200 Sobic002G243200 Sobic002G243200 Sobic001G416600--Sobic002G243200 Sobic001G416600--Sobic007G188100 Sobic001G442900 Sobic001G442900 Sobic001G416600--Sobic001G442900 Sobic009G104000 Sobic009G104000 Sobic001G416600--Sobic009G104000 Sobic004G273200 Sobic004G273200 Sobic002G270700--Sobic004G273200 Sobic002G270700--Sobic003G392200 Sobic002G270700--Sobic001G525400 Sobic003G338900 Sobic003G338900 Sobic002G270700--Sobic003G338900 Sobic006G267700 Sobic006G267700 Sobic002G270700--Sobic006G267700 Sobic002G270700--Sobic002G330300 Sobic002G270700--Sobic007G178200 Sobic006G263100 Sobic006G263100 Sobic002G270700--Sobic006G263100 Sobic002G197600 Sobic002G197600 Sobic002G270700--Sobic002G197600 Sobic009G171100 Sobic009G171100 Sobic001G525400--Sobic009G171100 Sobic003G253500 Sobic003G253500 Sobic001G525400--Sobic003G253500 Sobic002G353400 Sobic002G353400 Sobic001G525400--Sobic002G353400 Sobic001G525400--Sobic007G188100 Sobic001G370600 Sobic001G370600 Sobic001G525400--Sobic001G370600 Sobic001G525400--Sobic002G330300 Sobic001G525400--Sobic007G011000 Sobic001G525400--Sobic003G338900 Sobic001G525400--Sobic003G392200 Sobic005G157200 Sobic005G157200 Sobic002G380000--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic002G380000--Sobic008G058300 Sobic010G029400 Sobic010G029400 Sobic002G380000--Sobic010G029400 Sobic002G022400 Sobic002G022400 Sobic002G380000--Sobic002G022400 Sobic002G007100 Sobic002G007100 Sobic002G380000--Sobic002G007100 Sobic004G152400 Sobic004G152400 Sobic002G380000--Sobic004G152400 Sobic004G002350 Sobic004G002350 Sobic002G380000--Sobic004G002350 Sobic006G052400 Sobic006G052400 Sobic002G380000--Sobic006G052400 Sobic003G025200 Sobic003G025200 Sobic002G380000--Sobic003G025200 Sobic010G219100 Sobic010G219100 Sobic001G322900--Sobic010G219100 Sobic006G257001 Sobic006G257001 Sobic001G322900--Sobic006G257001 Sobic001G404200 Sobic001G404200 Sobic001G322900--Sobic001G404200 Sobic004G072800 Sobic004G072800 Sobic001G322900--Sobic004G072800 Sobic003G023500 Sobic003G023500 Sobic001G322900--Sobic003G023500 Sobic002G413400 Sobic002G413400 Sobic001G322900--Sobic002G413400 Sobic009G193850 Sobic009G193850 Sobic001G322900--Sobic009G193850 Sobic006G251701 Sobic006G251701 Sobic001G322900--Sobic006G251701 Sobic001G408100 Sobic001G408100 Sobic001G322900--Sobic001G408100
Octagon: transcription factors


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