Gene annotation
Transcriptome id Sobic.001G174500.1
Synonym Sb01g015180
Functional annotation GRAS family transcription factor containing protein, expressed
UniProt A0A1Z5S640
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF60
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37650 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os03g40080.1 : GRAS family transcription factor containing protein, expressed
MaizeGDB (Corn) Zm00025a007196
Brachypodium -
Barley HORVU3Hr1G012520.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G006600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY80, expressed -
2 Sobic.003G263600 glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.003G047500 flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed K13496: UDP-glucosyltransferase 73C
4 Sobic.004G280600 - -
5 Sobic.006G182000 helix-loop-helix DNA-binding protein, putative, expressed -
6 Sobic.003G413600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
7 Sobic.010G026775 - -
8 Sobic.001G150650 - -
9 Sobic.008G162600 fatty acid hydroxylase, putative, expressed -
10 Sobic.005G024700 major facilitator superfamily antiporter, putative, expressed -
11 Sobic.004G128100 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
12 Sobic.001G447500 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
13 Sobic.010G056100 HIRAN domain containing protein, putative, expressed K15363: FAN1, fanconi-associated nuclease 1
14 Sobic.003G072801 - -
15 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
16 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
17 Sobic.003G395600 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
18 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
19 Sobic.003G315500 adhesive/proline-rich protein, putative, expressed -
20 Sobic.003G097000 expressed protein -


Gene co-expression network
sample Sobic001G174500 Sobic001G174500 Sobic001G006600 Sobic001G006600 Sobic001G174500--Sobic001G006600 Sobic003G263600 Sobic003G263600 Sobic001G174500--Sobic003G263600 Sobic003G047500 Sobic003G047500 Sobic001G174500--Sobic003G047500 Sobic004G280600 Sobic004G280600 Sobic001G174500--Sobic004G280600 Sobic006G182000 Sobic006G182000 Sobic001G174500--Sobic006G182000 Sobic003G413600 Sobic003G413600 Sobic001G174500--Sobic003G413600 Sobic010G026775 Sobic010G026775 Sobic001G174500--Sobic010G026775 Sobic001G150650 Sobic001G150650 Sobic001G174500--Sobic001G150650 Sobic008G162600 Sobic008G162600 Sobic001G174500--Sobic008G162600 Sobic003G087200 Sobic003G087200 Sobic001G006600--Sobic003G087200 Sobic001G150600 Sobic001G150600 Sobic001G006600--Sobic001G150600 Sobic005G169400 Sobic005G169400 Sobic001G006600--Sobic005G169400 Sobic009G207600 Sobic009G207600 Sobic001G006600--Sobic009G207600 Sobic009G114000 Sobic009G114000 Sobic001G006600--Sobic009G114000 Sobic003G355600 Sobic003G355600 Sobic001G006600--Sobic003G355600 Sobic004G063400 Sobic004G063400 Sobic001G006600--Sobic004G063400 Sobic004G321800 Sobic004G321800 Sobic001G006600--Sobic004G321800 Sobic003G148800 Sobic003G148800 Sobic001G006600--Sobic003G148800 Sobic002G284600 Sobic002G284600 Sobic003G263600--Sobic002G284600 Sobic009G237350 Sobic009G237350 Sobic003G263600--Sobic009G237350 Sobic003G091850 Sobic003G091850 Sobic003G263600--Sobic003G091850 Sobic008G178200 Sobic008G178200 Sobic003G263600--Sobic008G178200 Sobic008G091500 Sobic008G091500 Sobic003G263600--Sobic008G091500 Sobic009G066100 Sobic009G066100 Sobic003G263600--Sobic009G066100 Sobic005G108300 Sobic005G108300 Sobic003G263600--Sobic005G108300 Sobic008G178300 Sobic008G178300 Sobic003G263600--Sobic008G178300 Sobic009G180100 Sobic009G180100 Sobic003G263600--Sobic009G180100 Sobic002G011600 Sobic002G011600 Sobic003G047500--Sobic002G011600 Sobic001G145600 Sobic001G145600 Sobic003G047500--Sobic001G145600 Sobic003G047500--Sobic003G413600 Sobic009G140150 Sobic009G140150 Sobic003G047500--Sobic009G140150 Sobic002G100700 Sobic002G100700 Sobic003G047500--Sobic002G100700 Sobic010G098100 Sobic010G098100 Sobic003G047500--Sobic010G098100 Sobic005G151700 Sobic005G151700 Sobic003G047500--Sobic005G151700 Sobic001G483500 Sobic001G483500 Sobic003G047500--Sobic001G483500 Sobic007G187300 Sobic007G187300 Sobic003G047500--Sobic007G187300 Sobic004G036500 Sobic004G036500 Sobic004G280600--Sobic004G036500 Sobic008G179100 Sobic008G179100 Sobic004G280600--Sobic008G179100 Sobic003G245201 Sobic003G245201 Sobic004G280600--Sobic003G245201 Sobic003G076800 Sobic003G076800 Sobic004G280600--Sobic003G076800 Sobic001G370100 Sobic001G370100 Sobic004G280600--Sobic001G370100 Sobic003G298500 Sobic003G298500 Sobic004G280600--Sobic003G298500 Sobic002G063201 Sobic002G063201 Sobic004G280600--Sobic002G063201 Sobic001G177500 Sobic001G177500 Sobic004G280600--Sobic001G177500 Sobic001G444100 Sobic001G444100 Sobic004G280600--Sobic001G444100 Sobic009G226600 Sobic009G226600 Sobic006G182000--Sobic009G226600 Sobic002G087800 Sobic002G087800 Sobic006G182000--Sobic002G087800 Sobic006G182000--Sobic004G321800 Sobic006G182000--Sobic003G087200 Sobic006G181300 Sobic006G181300 Sobic006G182000--Sobic006G181300 Sobic009G057300 Sobic009G057300 Sobic006G182000--Sobic009G057300 Sobic006G100332 Sobic006G100332 Sobic006G182000--Sobic006G100332 Sobic001G325200 Sobic001G325200 Sobic006G182000--Sobic001G325200 Sobic006G182000--Sobic001G150600 Sobic009G105500 Sobic009G105500 Sobic003G413600--Sobic009G105500 Sobic003G413600--Sobic003G047500 Sobic004G087700 Sobic004G087700 Sobic003G413600--Sobic004G087700 Sobic003G097000 Sobic003G097000 Sobic003G413600--Sobic003G097000 Sobic003G413600--Sobic009G140150 Sobic003G072801 Sobic003G072801 Sobic003G413600--Sobic003G072801 Sobic010G263950 Sobic010G263950 Sobic003G413600--Sobic010G263950 Sobic003G270650 Sobic003G270650 Sobic003G413600--Sobic003G270650 Sobic004G299300 Sobic004G299300 Sobic003G413600--Sobic004G299300 Sobic002G009700 Sobic002G009700 Sobic010G026775--Sobic002G009700 Sobic001G443900 Sobic001G443900 Sobic010G026775--Sobic001G443900 Sobic001G373200 Sobic001G373200 Sobic010G026775--Sobic001G373200 Sobic010G148501 Sobic010G148501 Sobic010G026775--Sobic010G148501 Sobic009G121100 Sobic009G121100 Sobic010G026775--Sobic009G121100 Sobic010G026775--Sobic003G355600 Sobic003G407300 Sobic003G407300 Sobic010G026775--Sobic003G407300 Sobic001G507300 Sobic001G507300 Sobic010G026775--Sobic001G507300 Sobic006G214500 Sobic006G214500 Sobic010G026775--Sobic006G214500 Sobic001G150650--Sobic001G150600 Sobic004G255000 Sobic004G255000 Sobic001G150650--Sobic004G255000 Sobic001G150650--Sobic003G087200 Sobic001G150650--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic001G150650--Sobic009G029600 Sobic008G153400 Sobic008G153400 Sobic001G150650--Sobic008G153400 Sobic002G085300 Sobic002G085300 Sobic001G150650--Sobic002G085300 Sobic001G162700 Sobic001G162700 Sobic001G150650--Sobic001G162700 Sobic003G259200 Sobic003G259200 Sobic001G150650--Sobic003G259200 Sobic008G162600--Sobic001G150650 Sobic002G020950 Sobic002G020950 Sobic008G162600--Sobic002G020950 Sobic006G100400 Sobic006G100400 Sobic008G162600--Sobic006G100400 Sobic010G170550 Sobic010G170550 Sobic008G162600--Sobic010G170550 Sobic001G412700 Sobic001G412700 Sobic008G162600--Sobic001G412700 Sobic006G039000 Sobic006G039000 Sobic008G162600--Sobic006G039000 Sobic008G162600--Sobic004G255000 Sobic003G269700 Sobic003G269700 Sobic008G162600--Sobic003G269700
Octagon: transcription factors


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