Gene annotation
Transcriptome id Sobic.001G184800.1
Synonym Sb01g016040, small auxin up RNA, SbSAUR7
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR52 - Auxin-responsive SAUR gene family member, expressed
UniProt C5WUB8
Pfam PF02519
Panther DB PTHR31175 PTHR31175:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G29500 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37470.1 : OsSAUR52 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a014496 , Zm00025a047986 , Zm00025a014499 , Zm00025a014498 , Zm00025a014500
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G092500 seven in absentia protein family protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
2 Sobic.001G340900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
4 Sobic.002G070000 OsFBX230 - F-box domain containing protein, expressed -
5 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
6 Sobic.004G326800 expressed protein -
7 Sobic.010G237650 - -
8 Sobic.007G118075 - -
9 Sobic.003G000900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@X8 domain containing protein, expressed -
10 Sobic.003G091600 expressed protein -
11 Sobic.009G024900 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
12 Sobic.009G011500 expressed protein -
13 Sobic.003G092066 - -
14 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
15 Sobic.007G116000 EDM2, putative, expressed -
16 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -
17 Sobic.007G118050 - -
18 Sobic.003G243000 expressed protein -
19 Sobic.004G175000 expressed protein -
20 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic001G184800 Sobic001G184800 Sobic003G092500 Sobic003G092500 Sobic001G184800--Sobic003G092500 Sobic001G340900 Sobic001G340900 Sobic001G184800--Sobic001G340900 Sobic002G367300 Sobic002G367300 Sobic001G184800--Sobic002G367300 Sobic002G070000 Sobic002G070000 Sobic001G184800--Sobic002G070000 Sobic002G203600 Sobic002G203600 Sobic001G184800--Sobic002G203600 Sobic004G326800 Sobic004G326800 Sobic001G184800--Sobic004G326800 Sobic010G237650 Sobic010G237650 Sobic001G184800--Sobic010G237650 Sobic007G118075 Sobic007G118075 Sobic001G184800--Sobic007G118075 Sobic003G000900 Sobic003G000900 Sobic001G184800--Sobic003G000900 Sobic003G092066 Sobic003G092066 Sobic003G092500--Sobic003G092066 Sobic007G118050 Sobic007G118050 Sobic003G092500--Sobic007G118050 Sobic003G092500--Sobic010G237650 Sobic002G106200 Sobic002G106200 Sobic003G092500--Sobic002G106200 Sobic003G066700 Sobic003G066700 Sobic003G092500--Sobic003G066700 Sobic003G092500--Sobic007G118075 Sobic006G022500 Sobic006G022500 Sobic003G092500--Sobic006G022500 Sobic007G127950 Sobic007G127950 Sobic003G092500--Sobic007G127950 Sobic006G181500 Sobic006G181500 Sobic003G092500--Sobic006G181500 Sobic001G340900--Sobic007G118075 Sobic002G299200 Sobic002G299200 Sobic001G340900--Sobic002G299200 Sobic002G259301 Sobic002G259301 Sobic001G340900--Sobic002G259301 Sobic003G090000 Sobic003G090000 Sobic001G340900--Sobic003G090000 Sobic003G044000 Sobic003G044000 Sobic001G340900--Sobic003G044000 Sobic001G288000 Sobic001G288000 Sobic001G340900--Sobic001G288000 Sobic009G152120 Sobic009G152120 Sobic001G340900--Sobic009G152120 Sobic003G396500 Sobic003G396500 Sobic001G340900--Sobic003G396500 Sobic007G038250 Sobic007G038250 Sobic001G340900--Sobic007G038250 Sobic006G262600 Sobic006G262600 Sobic002G367300--Sobic006G262600 Sobic010G091700 Sobic010G091700 Sobic002G367300--Sobic010G091700 Sobic001G184400 Sobic001G184400 Sobic002G367300--Sobic001G184400 Sobic009G011500 Sobic009G011500 Sobic002G367300--Sobic009G011500 Sobic003G380500 Sobic003G380500 Sobic002G367300--Sobic003G380500 Sobic004G154600 Sobic004G154600 Sobic002G367300--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic002G367300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G367300--Sobic003G174900 Sobic004G205500 Sobic004G205500 Sobic002G367300--Sobic004G205500 Sobic009G024900 Sobic009G024900 Sobic002G070000--Sobic009G024900 Sobic002G070000--Sobic009G011500 Sobic008G169400 Sobic008G169400 Sobic002G070000--Sobic008G169400 Sobic009G158900 Sobic009G158900 Sobic002G070000--Sobic009G158900 Sobic001G448100 Sobic001G448100 Sobic002G070000--Sobic001G448100 Sobic002G070000--Sobic002G367300 Sobic010G046400 Sobic010G046400 Sobic002G070000--Sobic010G046400 Sobic002G216600 Sobic002G216600 Sobic002G070000--Sobic002G216600 Sobic005G204100 Sobic005G204100 Sobic002G070000--Sobic005G204100 Sobic005G123400 Sobic005G123400 Sobic002G203600--Sobic005G123400 Sobic007G192400 Sobic007G192400 Sobic002G203600--Sobic007G192400 Sobic003G091600 Sobic003G091600 Sobic002G203600--Sobic003G091600 Sobic004G259300 Sobic004G259300 Sobic002G203600--Sobic004G259300 Sobic003G353700 Sobic003G353700 Sobic002G203600--Sobic003G353700 Sobic009G227100 Sobic009G227100 Sobic002G203600--Sobic009G227100 Sobic002G203600--Sobic010G237650 Sobic007G184800 Sobic007G184800 Sobic002G203600--Sobic007G184800 Sobic001G521700 Sobic001G521700 Sobic002G203600--Sobic001G521700 Sobic004G229700 Sobic004G229700 Sobic004G326800--Sobic004G229700 Sobic003G319900 Sobic003G319900 Sobic004G326800--Sobic003G319900 Sobic001G183500 Sobic001G183500 Sobic004G326800--Sobic001G183500 Sobic005G062600 Sobic005G062600 Sobic004G326800--Sobic005G062600 Sobic005G168400 Sobic005G168400 Sobic004G326800--Sobic005G168400 Sobic001G079900 Sobic001G079900 Sobic004G326800--Sobic001G079900 Sobic001G384700 Sobic001G384700 Sobic004G326800--Sobic001G384700 Sobic003G035400 Sobic003G035400 Sobic004G326800--Sobic003G035400 Sobic006G232900 Sobic006G232900 Sobic004G326800--Sobic006G232900 Sobic002G033600 Sobic002G033600 Sobic010G237650--Sobic002G033600 Sobic010G237650--Sobic003G092066 Sobic002G268900 Sobic002G268900 Sobic010G237650--Sobic002G268900 Sobic006G144000 Sobic006G144000 Sobic010G237650--Sobic006G144000 Sobic007G139400 Sobic007G139400 Sobic010G237650--Sobic007G139400 Sobic006G215100 Sobic006G215100 Sobic010G237650--Sobic006G215100 Sobic010G073600 Sobic010G073600 Sobic010G237650--Sobic010G073600 Sobic005G128000 Sobic005G128000 Sobic010G237650--Sobic005G128000 Sobic009G102000 Sobic009G102000 Sobic010G237650--Sobic009G102000 Sobic007G118075--Sobic007G118050 Sobic002G108100 Sobic002G108100 Sobic007G118075--Sobic002G108100 Sobic007G118075--Sobic005G123400 Sobic007G118075--Sobic001G340900 Sobic006G237500 Sobic006G237500 Sobic007G118075--Sobic006G237500 Sobic004G353300 Sobic004G353300 Sobic007G118075--Sobic004G353300 Sobic001G433600 Sobic001G433600 Sobic007G118075--Sobic001G433600 Sobic007G118075--Sobic010G237650 Sobic002G147200 Sobic002G147200 Sobic007G118075--Sobic002G147200 Sobic007G198800 Sobic007G198800 Sobic003G000900--Sobic007G198800 Sobic003G000900--Sobic006G022500 Sobic003G107900 Sobic003G107900 Sobic003G000900--Sobic003G107900 Sobic008G172200 Sobic008G172200 Sobic003G000900--Sobic008G172200 Sobic003G412100 Sobic003G412100 Sobic003G000900--Sobic003G412100 Sobic002G355600 Sobic002G355600 Sobic003G000900--Sobic002G355600 Sobic004G197900 Sobic004G197900 Sobic003G000900--Sobic004G197900 Sobic010G235500 Sobic010G235500 Sobic003G000900--Sobic010G235500 Sobic002G334600 Sobic002G334600 Sobic003G000900--Sobic002G334600
Octagon: transcription factors


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