Gene annotation
Transcriptome id Sobic.003G091600.9,Sobic.003G091600.7,Sobic.003G091600.8,Sobic.003G091600.6,Sobic.003G091600.5,Sobic.003G091600.3,Sobic.003G091600.11,Sobic.003G091600.10,Sobic.003G091600.1,Sobic.003G091600.4
Synonym
Functional annotation expressed protein
UniProt A0A1W0VWG8 , A0A1W0VWD4 , A0A1W0VWD0 , A0A1W0VWC9 , A0A1W0VWG2 , A0A1W0VWF8 , A0A1B6Q270 , A0A1B6Q294
Pfam -
Panther DB PTHR34835
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g37320.1,LOC_Os01g63040.1,LOC_Os05g39490.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G184800 transcription factor RF2a, putative, expressed -
2 Sobic.003G289100 3-5 exonuclease domain-containing protein, putative, expressed -
3 Sobic.003G213000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
4 Sobic.008G155400 ankyrin, putative, expressed -
5 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
6 Sobic.010G146000 CSLD5 - cellulose synthase-like family D, expressed -
7 Sobic.008G036600 expressed protein -
8 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
9 Sobic.001G519600 - -
10 Sobic.010G202200 - -
11 Sobic.007G082200 white-brown complex homolog protein 11, putative, expressed -
12 Sobic.004G082800 GRAM and C2 domains containing protein, putative, expressed -
13 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
14 Sobic.009G047700 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed -
15 Sobic.010G024400 expressed protein -
16 Sobic.004G194400 expressed protein -
17 Sobic.001G504500 expressed protein -
18 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
19 Sobic.008G128500 - -
20 Sobic.006G117700 - -


Gene co-expression network
sample Sobic003G091600 Sobic003G091600 Sobic007G184800 Sobic007G184800 Sobic003G091600--Sobic007G184800 Sobic003G289100 Sobic003G289100 Sobic003G091600--Sobic003G289100 Sobic003G213000 Sobic003G213000 Sobic003G091600--Sobic003G213000 Sobic008G155400 Sobic008G155400 Sobic003G091600--Sobic008G155400 Sobic002G203600 Sobic002G203600 Sobic003G091600--Sobic002G203600 Sobic010G146000 Sobic010G146000 Sobic003G091600--Sobic010G146000 Sobic008G036600 Sobic008G036600 Sobic003G091600--Sobic008G036600 Sobic007G192400 Sobic007G192400 Sobic003G091600--Sobic007G192400 Sobic001G519600 Sobic001G519600 Sobic003G091600--Sobic001G519600 Sobic007G184800--Sobic003G091600 Sobic007G184800--Sobic003G213000 Sobic007G184800--Sobic003G289100 Sobic004G259300 Sobic004G259300 Sobic007G184800--Sobic004G259300 Sobic004G082800 Sobic004G082800 Sobic007G184800--Sobic004G082800 Sobic007G184800--Sobic001G519600 Sobic010G202200 Sobic010G202200 Sobic007G184800--Sobic010G202200 Sobic009G230800 Sobic009G230800 Sobic007G184800--Sobic009G230800 Sobic007G184800--Sobic010G146000 Sobic003G289100--Sobic003G091600 Sobic003G289100--Sobic007G184800 Sobic003G289100--Sobic003G213000 Sobic010G073600 Sobic010G073600 Sobic003G289100--Sobic010G073600 Sobic004G218300 Sobic004G218300 Sobic003G289100--Sobic004G218300 Sobic003G289100--Sobic004G259300 Sobic003G289100--Sobic001G519600 Sobic003G289100--Sobic007G192400 Sobic008G155500 Sobic008G155500 Sobic003G289100--Sobic008G155500 Sobic003G213000--Sobic008G155500 Sobic003G213000--Sobic010G202200 Sobic002G382300 Sobic002G382300 Sobic003G213000--Sobic002G382300 Sobic003G213000--Sobic001G519600 Sobic003G213000--Sobic009G230800 Sobic010G024400 Sobic010G024400 Sobic003G213000--Sobic010G024400 Sobic005G110424 Sobic005G110424 Sobic003G213000--Sobic005G110424 Sobic008G100600 Sobic008G100600 Sobic003G213000--Sobic008G100600 Sobic006G117700 Sobic006G117700 Sobic003G213000--Sobic006G117700 Sobic002G158300 Sobic002G158300 Sobic008G155400--Sobic002G158300 Sobic003G342500 Sobic003G342500 Sobic008G155400--Sobic003G342500 Sobic005G171700 Sobic005G171700 Sobic008G155400--Sobic005G171700 Sobic004G140400 Sobic004G140400 Sobic008G155400--Sobic004G140400 Sobic002G102300 Sobic002G102300 Sobic008G155400--Sobic002G102300 Sobic008G155400--Sobic008G036600 Sobic001G270700 Sobic001G270700 Sobic008G155400--Sobic001G270700 Sobic008G155400--Sobic003G213000 Sobic002G108100 Sobic002G108100 Sobic008G155400--Sobic002G108100 Sobic005G123400 Sobic005G123400 Sobic002G203600--Sobic005G123400 Sobic002G203600--Sobic007G192400 Sobic002G203600--Sobic003G091600 Sobic002G203600--Sobic004G259300 Sobic003G353700 Sobic003G353700 Sobic002G203600--Sobic003G353700 Sobic009G227100 Sobic009G227100 Sobic002G203600--Sobic009G227100 Sobic010G237650 Sobic010G237650 Sobic002G203600--Sobic010G237650 Sobic002G203600--Sobic007G184800 Sobic001G521700 Sobic001G521700 Sobic002G203600--Sobic001G521700 Sobic004G011900 Sobic004G011900 Sobic010G146000--Sobic004G011900 Sobic010G146000--Sobic008G100600 Sobic008G100300 Sobic008G100300 Sobic010G146000--Sobic008G100300 Sobic010G146000--Sobic003G213000 Sobic001G405100 Sobic001G405100 Sobic010G146000--Sobic001G405100 Sobic010G146000--Sobic005G110424 Sobic010G146000--Sobic004G082800 Sobic010G146000--Sobic010G202200 Sobic010G146000--Sobic008G036600 Sobic008G036600--Sobic010G202200 Sobic003G236000 Sobic003G236000 Sobic008G036600--Sobic003G236000 Sobic001G024400 Sobic001G024400 Sobic008G036600--Sobic001G024400 Sobic008G036600--Sobic010G024400 Sobic005G225500 Sobic005G225500 Sobic008G036600--Sobic005G225500 Sobic008G036600--Sobic005G110424 Sobic007G039200 Sobic007G039200 Sobic008G036600--Sobic007G039200 Sobic005G185500 Sobic005G185500 Sobic008G036600--Sobic005G185500 Sobic008G036600--Sobic009G230800 Sobic007G192400--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic007G192400--Sobic008G006000 Sobic007G077532 Sobic007G077532 Sobic007G192400--Sobic007G077532 Sobic010G181600 Sobic010G181600 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic007G192400--Sobic004G259300 Sobic007G192400--Sobic002G203600 Sobic007G192400--Sobic008G036600 Sobic004G141400 Sobic004G141400 Sobic007G192400--Sobic004G141400 Sobic001G519600--Sobic009G230800 Sobic001G519600--Sobic010G202200 Sobic001G519600--Sobic008G155500 Sobic001G340800 Sobic001G340800 Sobic001G519600--Sobic001G340800 Sobic009G061500 Sobic009G061500 Sobic001G519600--Sobic009G061500 Sobic006G269101 Sobic006G269101 Sobic001G519600--Sobic006G269101 Sobic006G143700 Sobic006G143700 Sobic001G519600--Sobic006G143700 Sobic008G148600 Sobic008G148600 Sobic001G519600--Sobic008G148600 Sobic001G519600--Sobic010G024400
Octagon: transcription factors


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