Gene annotation
Transcriptome id Sobic.001G195700.1
Synonym Sb01g017226
Functional annotation DUF677 domain containing protein, putative, expressed
UniProt C5WVF6
Pfam PF05633
Panther DB PTHR31509 PTHR31509:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46080 : -
RAP-DB (Rice) LOC_Os10g36950.1 : DUF677 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a006325
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G195700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
2 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.007G226100 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
4 Sobic.001G054200 green ripe-like, putative, expressed -
5 Sobic.010G039800 expressed protein -
6 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
7 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
8 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
9 Sobic.001G350501 - K11253: histone H3
10 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
11 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
12 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
13 Sobic.008G142700 expressed protein -
14 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
15 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
16 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
17 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
18 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
19 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
20 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G195700 Sobic001G195700 Sobic004G248800 Sobic004G248800 Sobic001G195700--Sobic004G248800 Sobic006G256500 Sobic006G256500 Sobic001G195700--Sobic006G256500 Sobic007G226100 Sobic007G226100 Sobic001G195700--Sobic007G226100 Sobic001G054200 Sobic001G054200 Sobic001G195700--Sobic001G054200 Sobic010G039800 Sobic010G039800 Sobic001G195700--Sobic010G039800 Sobic003G115800 Sobic003G115800 Sobic001G195700--Sobic003G115800 Sobic004G079100 Sobic004G079100 Sobic001G195700--Sobic004G079100 Sobic003G273100 Sobic003G273100 Sobic001G195700--Sobic003G273100 Sobic001G350501 Sobic001G350501 Sobic001G195700--Sobic001G350501 Sobic006G141500 Sobic006G141500 Sobic004G248800--Sobic006G141500 Sobic001G529000 Sobic001G529000 Sobic004G248800--Sobic001G529000 Sobic004G248800--Sobic010G039800 Sobic003G253000 Sobic003G253000 Sobic004G248800--Sobic003G253000 Sobic004G293700 Sobic004G293700 Sobic004G248800--Sobic004G293700 Sobic008G161800 Sobic008G161800 Sobic004G248800--Sobic008G161800 Sobic002G263800 Sobic002G263800 Sobic004G248800--Sobic002G263800 Sobic002G218000 Sobic002G218000 Sobic004G248800--Sobic002G218000 Sobic003G249800 Sobic003G249800 Sobic004G248800--Sobic003G249800 Sobic009G036900 Sobic009G036900 Sobic006G256500--Sobic009G036900 Sobic002G068300 Sobic002G068300 Sobic006G256500--Sobic002G068300 Sobic006G256500--Sobic004G248800 Sobic007G163700 Sobic007G163700 Sobic006G256500--Sobic007G163700 Sobic006G256500--Sobic001G529000 Sobic006G256500--Sobic010G039800 Sobic009G016201 Sobic009G016201 Sobic006G256500--Sobic009G016201 Sobic001G162000 Sobic001G162000 Sobic006G256500--Sobic001G162000 Sobic010G243200 Sobic010G243200 Sobic006G256500--Sobic010G243200 Sobic010G065400 Sobic010G065400 Sobic007G226100--Sobic010G065400 Sobic007G226100--Sobic001G529000 Sobic001G439600 Sobic001G439600 Sobic007G226100--Sobic001G439600 Sobic005G157200 Sobic005G157200 Sobic007G226100--Sobic005G157200 Sobic001G315500 Sobic001G315500 Sobic007G226100--Sobic001G315500 Sobic005G111100 Sobic005G111100 Sobic007G226100--Sobic005G111100 Sobic010G193800 Sobic010G193800 Sobic007G226100--Sobic010G193800 Sobic003G055500 Sobic003G055500 Sobic007G226100--Sobic003G055500 Sobic003G329800 Sobic003G329800 Sobic007G226100--Sobic003G329800 Sobic010G083700 Sobic010G083700 Sobic001G054200--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic009G246950 Sobic009G246950 Sobic001G054200--Sobic009G246950 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic001G054200--Sobic003G115800 Sobic010G039800--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic010G039800--Sobic007G095400 Sobic010G039800--Sobic004G248800 Sobic010G039800--Sobic001G529000 Sobic010G039800--Sobic008G161800 Sobic010G039800--Sobic009G016201 Sobic010G039800--Sobic002G218000 Sobic002G373800 Sobic002G373800 Sobic010G039800--Sobic002G373800 Sobic010G039800--Sobic009G036900 Sobic003G115800--Sobic007G186300 Sobic004G300900 Sobic004G300900 Sobic003G115800--Sobic004G300900 Sobic003G220600 Sobic003G220600 Sobic003G115800--Sobic003G220600 Sobic002G078400 Sobic002G078400 Sobic003G115800--Sobic002G078400 Sobic010G204300 Sobic010G204300 Sobic003G115800--Sobic010G204300 Sobic003G115800--Sobic001G054200 Sobic002G202300 Sobic002G202300 Sobic003G115800--Sobic002G202300 Sobic003G115800--Sobic004G079100 Sobic003G115800--Sobic004G293700 Sobic004G079100--Sobic004G293700 Sobic001G138300 Sobic001G138300 Sobic004G079100--Sobic001G138300 Sobic004G079100--Sobic001G054200 Sobic004G079100--Sobic010G083700 Sobic004G079100--Sobic003G115800 Sobic004G079100--Sobic007G186300 Sobic004G079100--Sobic009G246950 Sobic009G171700 Sobic009G171700 Sobic004G079100--Sobic009G171700 Sobic001G371300 Sobic001G371300 Sobic004G079100--Sobic001G371300 Sobic003G273100--Sobic001G371300 Sobic001G149700 Sobic001G149700 Sobic003G273100--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic003G273100--Sobic001G478300 Sobic004G274700 Sobic004G274700 Sobic003G273100--Sobic004G274700 Sobic002G291300 Sobic002G291300 Sobic003G273100--Sobic002G291300 Sobic001G427800 Sobic001G427800 Sobic003G273100--Sobic001G427800 Sobic004G231400 Sobic004G231400 Sobic003G273100--Sobic004G231400 Sobic007G126200 Sobic007G126200 Sobic003G273100--Sobic007G126200 Sobic003G273100--Sobic004G079100 Sobic003G024800 Sobic003G024800 Sobic001G350501--Sobic003G024800 Sobic004G349100 Sobic004G349100 Sobic001G350501--Sobic004G349100 Sobic001G309100 Sobic001G309100 Sobic001G350501--Sobic001G309100 Sobic001G350501--Sobic010G193800 Sobic008G142700 Sobic008G142700 Sobic001G350501--Sobic008G142700 Sobic009G034400 Sobic009G034400 Sobic001G350501--Sobic009G034400 Sobic003G420700 Sobic003G420700 Sobic001G350501--Sobic003G420700 Sobic001G350501--Sobic009G036900 Sobic007G063200 Sobic007G063200 Sobic001G350501--Sobic007G063200
Octagon: transcription factors


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