Gene annotation
Transcriptome id Sobic.001G286800.3,Sobic.001G286800.2,Sobic.001G286800.1,Sobic.001G286800.4
Synonym
Functional annotation expressed protein
UniProt A0A109NDT6 , A0A1Z5S814 , A0A1Z5S8A4 , A0A1B6QLN9 , A0A1Z5S824
Pfam -
Panther DB PTHR33890 PTHR33890:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g42066.1 : expressed protein
MaizeGDB (Corn) Zm00025a003491
Brachypodium -
Barley HORVU1Hr1G050590.2
Wheat TraesCS1B02G208300 , TraesCS1D02G197200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G016200 expressed protein -
2 Sobic.008G150500 - -
3 Sobic.001G276600 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.006G125200 ubiquitin family protein, putative, expressed -
5 Sobic.004G211800 - -
6 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -
7 Sobic.001G046400 expressed protein -
8 Sobic.006G127750 - -
9 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
10 Sobic.003G283900 leucine-rich repeat family protein, putative, expressed -
11 Sobic.002G380800 - -
12 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
13 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.002G035000 OsGrx_C10 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
15 Sobic.010G077700 ZOS6-02 - C2H2 zinc finger protein, expressed -
16 Sobic.007G153100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659906)@expressed protein -
17 Sobic.005G042200 homeobox domain containing protein, expressed -
18 Sobic.010G048200 expressed protein -
19 Sobic.008G038900 eukaryotic aspartyl protease domain containing protein, expressed -
20 Sobic.004G302700 YABBY domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G286800 Sobic001G286800 Sobic003G016200 Sobic003G016200 Sobic001G286800--Sobic003G016200 Sobic008G150500 Sobic008G150500 Sobic001G286800--Sobic008G150500 Sobic001G276600 Sobic001G276600 Sobic001G286800--Sobic001G276600 Sobic006G125200 Sobic006G125200 Sobic001G286800--Sobic006G125200 Sobic004G211800 Sobic004G211800 Sobic001G286800--Sobic004G211800 Sobic002G029700 Sobic002G029700 Sobic001G286800--Sobic002G029700 Sobic001G046400 Sobic001G046400 Sobic001G286800--Sobic001G046400 Sobic006G127750 Sobic006G127750 Sobic001G286800--Sobic006G127750 Sobic006G187000 Sobic006G187000 Sobic001G286800--Sobic006G187000 Sobic003G283900 Sobic003G283900 Sobic003G016200--Sobic003G283900 Sobic003G016200--Sobic001G046400 Sobic003G016200--Sobic008G150500 Sobic003G016200--Sobic006G187000 Sobic003G016200--Sobic004G211800 Sobic004G302700 Sobic004G302700 Sobic003G016200--Sobic004G302700 Sobic004G342000 Sobic004G342000 Sobic003G016200--Sobic004G342000 Sobic009G137500 Sobic009G137500 Sobic003G016200--Sobic009G137500 Sobic003G016200--Sobic002G029700 Sobic008G150500--Sobic006G187000 Sobic008G150500--Sobic001G046400 Sobic008G150500--Sobic003G283900 Sobic008G150500--Sobic004G211800 Sobic008G150500--Sobic003G016200 Sobic008G150500--Sobic004G302700 Sobic008G150500--Sobic002G029700 Sobic008G150500--Sobic009G137500 Sobic008G150500--Sobic004G342000 Sobic001G276600--Sobic004G211800 Sobic001G276600--Sobic008G150500 Sobic005G187000 Sobic005G187000 Sobic001G276600--Sobic005G187000 Sobic001G276600--Sobic006G187000 Sobic001G276600--Sobic003G283900 Sobic001G276600--Sobic003G016200 Sobic001G276600--Sobic001G046400 Sobic001G276600--Sobic009G137500 Sobic001G276600--Sobic002G029700 Sobic006G125200--Sobic009G137500 Sobic006G125200--Sobic003G016200 Sobic006G125200--Sobic006G187000 Sobic006G125200--Sobic001G276600 Sobic001G276800 Sobic001G276800 Sobic006G125200--Sobic001G276800 Sobic006G125200--Sobic008G150500 Sobic006G125200--Sobic001G046400 Sobic006G125200--Sobic003G283900 Sobic010G048700 Sobic010G048700 Sobic006G125200--Sobic010G048700 Sobic004G211800--Sobic003G283900 Sobic004G211800--Sobic008G150500 Sobic004G211800--Sobic002G029700 Sobic008G012600 Sobic008G012600 Sobic004G211800--Sobic008G012600 Sobic006G151800 Sobic006G151800 Sobic004G211800--Sobic006G151800 Sobic004G211800--Sobic004G342000 Sobic004G211800--Sobic003G016200 Sobic006G160800 Sobic006G160800 Sobic004G211800--Sobic006G160800 Sobic004G211800--Sobic001G046400 Sobic002G029700--Sobic006G151800 Sobic006G098300 Sobic006G098300 Sobic002G029700--Sobic006G098300 Sobic001G334501 Sobic001G334501 Sobic002G029700--Sobic001G334501 Sobic005G089700 Sobic005G089700 Sobic002G029700--Sobic005G089700 Sobic005G226500 Sobic005G226500 Sobic002G029700--Sobic005G226500 Sobic007G048500 Sobic007G048500 Sobic002G029700--Sobic007G048500 Sobic009G075000 Sobic009G075000 Sobic002G029700--Sobic009G075000 Sobic007G098600 Sobic007G098600 Sobic002G029700--Sobic007G098600 Sobic003G088200 Sobic003G088200 Sobic002G029700--Sobic003G088200 Sobic007G211200 Sobic007G211200 Sobic001G046400--Sobic007G211200 Sobic001G046400--Sobic008G150500 Sobic001G046400--Sobic006G187000 Sobic001G046400--Sobic004G302700 Sobic001G046400--Sobic004G342000 Sobic002G337600 Sobic002G337600 Sobic001G046400--Sobic002G337600 Sobic001G046400--Sobic003G016200 Sobic004G211700 Sobic004G211700 Sobic001G046400--Sobic004G211700 Sobic001G046400--Sobic003G283900 Sobic001G511600 Sobic001G511600 Sobic006G127750--Sobic001G511600 Sobic001G472301 Sobic001G472301 Sobic006G127750--Sobic001G472301 Sobic003G011700 Sobic003G011700 Sobic006G127750--Sobic003G011700 Sobic001G102600 Sobic001G102600 Sobic006G127750--Sobic001G102600 Sobic010G048200 Sobic010G048200 Sobic006G127750--Sobic010G048200 Sobic001G472400 Sobic001G472400 Sobic006G127750--Sobic001G472400 Sobic010G189366 Sobic010G189366 Sobic006G127750--Sobic010G189366 Sobic002G173300 Sobic002G173300 Sobic006G127750--Sobic002G173300 Sobic004G349150 Sobic004G349150 Sobic006G127750--Sobic004G349150 Sobic006G187000--Sobic008G150500 Sobic006G187000--Sobic009G137500 Sobic006G187000--Sobic001G046400 Sobic003G366000 Sobic003G366000 Sobic006G187000--Sobic003G366000 Sobic006G187000--Sobic004G302700 Sobic001G160000 Sobic001G160000 Sobic006G187000--Sobic001G160000 Sobic006G187000--Sobic003G016200 Sobic006G187000--Sobic003G283900 Sobic001G267100 Sobic001G267100 Sobic006G187000--Sobic001G267100
Octagon: transcription factors


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