Gene annotation
Transcriptome id Sobic.001G337300.3,Sobic.001G337300.2
Synonym
Functional annotation -
UniProt A0A1B6QMJ2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
2 Sobic.008G060050 - -
3 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
4 Sobic.007G067350 - -
5 Sobic.001G348700 - -
6 Sobic.010G170500 Leucine Rich Repeat family protein, expressed -
7 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
8 Sobic.006G107200 molybdopterin biosynthesis protein CNX3, putative, expressed K03639: moaA, GTP 3',8-cyclase
9 Sobic.004G128400 O-methyltransferase, putative, expressed -
10 Sobic.002G310500 chalcone synthase, putative, expressed -
11 Sobic.007G066932 - -
12 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
13 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.007G135201 - -
15 Sobic.002G368500 B12D protein, putative, expressed -
16 Sobic.003G362100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
17 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.007G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
20 Sobic.003G240600 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G337300 Sobic001G337300 Sobic008G140300 Sobic008G140300 Sobic001G337300--Sobic008G140300 Sobic008G060050 Sobic008G060050 Sobic001G337300--Sobic008G060050 Sobic007G148000 Sobic007G148000 Sobic001G337300--Sobic007G148000 Sobic007G067350 Sobic007G067350 Sobic001G337300--Sobic007G067350 Sobic001G348700 Sobic001G348700 Sobic001G337300--Sobic001G348700 Sobic010G170500 Sobic010G170500 Sobic001G337300--Sobic010G170500 Sobic004G304300 Sobic004G304300 Sobic001G337300--Sobic004G304300 Sobic006G107200 Sobic006G107200 Sobic001G337300--Sobic006G107200 Sobic004G128400 Sobic004G128400 Sobic001G337300--Sobic004G128400 Sobic008G140300--Sobic007G067350 Sobic008G140300--Sobic001G348700 Sobic006G084600 Sobic006G084600 Sobic008G140300--Sobic006G084600 Sobic002G183100 Sobic002G183100 Sobic008G140300--Sobic002G183100 Sobic007G067400 Sobic007G067400 Sobic008G140300--Sobic007G067400 Sobic004G221500 Sobic004G221500 Sobic008G140300--Sobic004G221500 Sobic007G066932 Sobic007G066932 Sobic008G140300--Sobic007G066932 Sobic010G084600 Sobic010G084600 Sobic008G140300--Sobic010G084600 Sobic010G084300 Sobic010G084300 Sobic008G140300--Sobic010G084300 Sobic002G368500 Sobic002G368500 Sobic008G060050--Sobic002G368500 Sobic003G240600 Sobic003G240600 Sobic008G060050--Sobic003G240600 Sobic008G060050--Sobic006G084600 Sobic008G060050--Sobic001G348700 Sobic003G317100 Sobic003G317100 Sobic008G060050--Sobic003G317100 Sobic004G071650 Sobic004G071650 Sobic008G060050--Sobic004G071650 Sobic001G487300 Sobic001G487300 Sobic008G060050--Sobic001G487300 Sobic003G437200 Sobic003G437200 Sobic008G060050--Sobic003G437200 Sobic003G362100 Sobic003G362100 Sobic008G060050--Sobic003G362100 Sobic005G203100 Sobic005G203100 Sobic007G148000--Sobic005G203100 Sobic007G148000--Sobic003G240600 Sobic002G310500 Sobic002G310500 Sobic007G148000--Sobic002G310500 Sobic007G135201 Sobic007G135201 Sobic007G148000--Sobic007G135201 Sobic003G088500 Sobic003G088500 Sobic007G148000--Sobic003G088500 Sobic008G082200 Sobic008G082200 Sobic007G148000--Sobic008G082200 Sobic003G426100 Sobic003G426100 Sobic007G148000--Sobic003G426100 Sobic001G243600 Sobic001G243600 Sobic007G148000--Sobic001G243600 Sobic010G239300 Sobic010G239300 Sobic007G148000--Sobic010G239300 Sobic007G067350--Sobic007G066932 Sobic002G195400 Sobic002G195400 Sobic007G067350--Sobic002G195400 Sobic007G067350--Sobic003G426100 Sobic007G067350--Sobic006G084600 Sobic010G102300 Sobic010G102300 Sobic007G067350--Sobic010G102300 Sobic007G067350--Sobic008G140300 Sobic007G067350--Sobic010G084300 Sobic001G319700 Sobic001G319700 Sobic007G067350--Sobic001G319700 Sobic010G035700 Sobic010G035700 Sobic007G067350--Sobic010G035700 Sobic003G252800 Sobic003G252800 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic010G084700 Sobic010G084700 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic010G117900 Sobic010G117900 Sobic001G348700--Sobic010G117900 Sobic005G206601 Sobic005G206601 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic006G099900 Sobic006G099900 Sobic001G348700--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic001G348700--Sobic001G317200 Sobic001G337350 Sobic001G337350 Sobic010G170500--Sobic001G337350 Sobic010G170500--Sobic001G337300 Sobic009G106800 Sobic009G106800 Sobic010G170500--Sobic009G106800 Sobic010G170500--Sobic002G368500 Sobic001G100700 Sobic001G100700 Sobic010G170500--Sobic001G100700 Sobic004G333150 Sobic004G333150 Sobic010G170500--Sobic004G333150 Sobic005G092900 Sobic005G092900 Sobic010G170500--Sobic005G092900 Sobic010G170500--Sobic007G148000 Sobic010G170500--Sobic004G304300 Sobic004G304300--Sobic007G066932 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic003G426000 Sobic003G426000 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic005G101800 Sobic005G101800 Sobic004G304300--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic004G304300--Sobic009G128700 Sobic006G107200--Sobic010G117900 Sobic009G068200 Sobic009G068200 Sobic006G107200--Sobic009G068200 Sobic006G107200--Sobic004G221500 Sobic001G231600 Sobic001G231600 Sobic006G107200--Sobic001G231600 Sobic006G173900 Sobic006G173900 Sobic006G107200--Sobic006G173900 Sobic006G107200--Sobic002G183100 Sobic006G107200--Sobic006G084600 Sobic006G107200--Sobic010G084700 Sobic006G107200--Sobic001G348700 Sobic004G128400--Sobic001G231600 Sobic002G182500 Sobic002G182500 Sobic004G128400--Sobic002G182500 Sobic001G320400 Sobic001G320400 Sobic004G128400--Sobic001G320400 Sobic001G331301 Sobic001G331301 Sobic004G128400--Sobic001G331301 Sobic004G128400--Sobic007G135201 Sobic001G495164 Sobic001G495164 Sobic004G128400--Sobic001G495164 Sobic004G128400--Sobic010G117900 Sobic007G067600 Sobic007G067600 Sobic004G128400--Sobic007G067600 Sobic004G128400--Sobic010G084700
Octagon: transcription factors


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