Gene annotation
Transcriptome id Sobic.001G343832.1
Synonym -
Functional annotation -
UniProt A0A1Z5S948
Pfam PF01073
Panther DB PTHR10366 PTHR10366:SF471
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT1G47290 : 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1
RAP-DB (Rice) LOC_Os03g29150.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002788 , Zm00025a052162
Brachypodium -
Barley HORVU7Hr1G118180.4 , HORVU7Hr1G118180.2 , HORVU7Hr1G118180.3 , HORVU7Hr1G118180.1 , HORVU7Hr1G118180.5
Wheat TraesCS7A02G538700 , TraesCS7A02G538700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G146100 - -
2 Sobic.001G343500 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
3 Sobic.006G033260 - -
4 Sobic.001G343601 - K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
5 Sobic.001G342700 protein phosphotase protein, putative, expressed -
6 Sobic.008G029400 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@WRKY DNA-binding protein 55("PubMedID : 26759170,PubMedID : 24597475")@WRKY46, expressed -
7 Sobic.002G379100 dehydrogenase, putative, expressed -
8 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
9 Sobic.008G054150 - -
10 Sobic.009G009400 expressed protein -
11 Sobic.001G260000 SAP domain containing protein, expressed -
12 Sobic.007G067300 Cupin domain containing protein, expressed -
13 Sobic.007G158700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@phospholipase A("PubMedID : 26759170,PubMedID : 24597475")@patatin, putative, expressed -
14 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
15 Sobic.004G115500 expressed protein -
16 Sobic.002G099451 - -
17 Sobic.010G179400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
18 Sobic.001G495116 - -
19 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.002G182500 nucleic acid binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G343832 Sobic001G343832 Sobic002G146100 Sobic002G146100 Sobic001G343832--Sobic002G146100 Sobic001G343500 Sobic001G343500 Sobic001G343832--Sobic001G343500 Sobic006G033260 Sobic006G033260 Sobic001G343832--Sobic006G033260 Sobic001G343601 Sobic001G343601 Sobic001G343832--Sobic001G343601 Sobic001G342700 Sobic001G342700 Sobic001G343832--Sobic001G342700 Sobic008G029400 Sobic008G029400 Sobic001G343832--Sobic008G029400 Sobic002G379100 Sobic002G379100 Sobic001G343832--Sobic002G379100 Sobic001G357100 Sobic001G357100 Sobic001G343832--Sobic001G357100 Sobic008G054150 Sobic008G054150 Sobic001G343832--Sobic008G054150 Sobic002G146100--Sobic001G343601 Sobic002G146100--Sobic001G342700 Sobic009G009400 Sobic009G009400 Sobic002G146100--Sobic009G009400 Sobic002G146100--Sobic008G054150 Sobic001G260000 Sobic001G260000 Sobic002G146100--Sobic001G260000 Sobic002G146100--Sobic006G033260 Sobic007G169500 Sobic007G169500 Sobic002G146100--Sobic007G169500 Sobic002G146100--Sobic001G343832 Sobic002G182500 Sobic002G182500 Sobic002G146100--Sobic002G182500 Sobic001G343500--Sobic001G342700 Sobic001G343500--Sobic001G343601 Sobic001G343500--Sobic001G343832 Sobic001G343500--Sobic002G182500 Sobic004G128400 Sobic004G128400 Sobic001G343500--Sobic004G128400 Sobic001G343500--Sobic001G260000 Sobic001G343500--Sobic002G379100 Sobic001G343500--Sobic006G033260 Sobic001G343500--Sobic002G146100 Sobic006G033260--Sobic001G342700 Sobic006G033260--Sobic001G343601 Sobic006G033260--Sobic002G146100 Sobic006G033260--Sobic001G357100 Sobic006G033260--Sobic008G054150 Sobic006G033260--Sobic009G009400 Sobic007G067300 Sobic007G067300 Sobic006G033260--Sobic007G067300 Sobic006G033260--Sobic007G169500 Sobic006G033260--Sobic001G260000 Sobic001G343601--Sobic009G009400 Sobic001G343601--Sobic008G054150 Sobic001G343601--Sobic001G342700 Sobic001G343601--Sobic001G260000 Sobic001G343601--Sobic007G169500 Sobic001G343601--Sobic002G146100 Sobic004G115500 Sobic004G115500 Sobic001G343601--Sobic004G115500 Sobic001G343601--Sobic006G033260 Sobic007G158700 Sobic007G158700 Sobic001G343601--Sobic007G158700 Sobic001G342700--Sobic007G067300 Sobic001G342700--Sobic001G343601 Sobic001G342700--Sobic009G009400 Sobic005G169100 Sobic005G169100 Sobic001G342700--Sobic005G169100 Sobic001G342700--Sobic002G146100 Sobic001G342700--Sobic006G033260 Sobic001G342700--Sobic002G182500 Sobic008G068166 Sobic008G068166 Sobic001G342700--Sobic008G068166 Sobic001G342700--Sobic008G054150 Sobic004G228500 Sobic004G228500 Sobic008G029400--Sobic004G228500 Sobic008G029400--Sobic001G260000 Sobic003G060100 Sobic003G060100 Sobic008G029400--Sobic003G060100 Sobic009G144700 Sobic009G144700 Sobic008G029400--Sobic009G144700 Sobic008G029400--Sobic008G054150 Sobic004G108200 Sobic004G108200 Sobic008G029400--Sobic004G108200 Sobic006G207000 Sobic006G207000 Sobic008G029400--Sobic006G207000 Sobic006G104700 Sobic006G104700 Sobic008G029400--Sobic006G104700 Sobic003G211400 Sobic003G211400 Sobic008G029400--Sobic003G211400 Sobic002G379100--Sobic007G158700 Sobic010G179400 Sobic010G179400 Sobic002G379100--Sobic010G179400 Sobic002G379100--Sobic008G029400 Sobic001G403000 Sobic001G403000 Sobic002G379100--Sobic001G403000 Sobic001G487300 Sobic001G487300 Sobic002G379100--Sobic001G487300 Sobic002G379100--Sobic001G343500 Sobic002G210401 Sobic002G210401 Sobic002G379100--Sobic002G210401 Sobic002G379100--Sobic004G228500 Sobic002G099451 Sobic002G099451 Sobic002G379100--Sobic002G099451 Sobic001G357100--Sobic004G115500 Sobic003G307300 Sobic003G307300 Sobic001G357100--Sobic003G307300 Sobic001G357100--Sobic007G169500 Sobic001G357100--Sobic001G343601 Sobic001G357100--Sobic009G009400 Sobic001G279701 Sobic001G279701 Sobic001G357100--Sobic001G279701 Sobic007G155200 Sobic007G155200 Sobic001G357100--Sobic007G155200 Sobic001G357100--Sobic008G054150 Sobic010G084600 Sobic010G084600 Sobic001G357100--Sobic010G084600 Sobic008G054150--Sobic007G169500 Sobic008G054150--Sobic001G260000 Sobic008G054150--Sobic001G343601 Sobic008G054150--Sobic009G009400 Sobic008G054150--Sobic004G115500 Sobic008G054150--Sobic002G146100 Sobic006G057500 Sobic006G057500 Sobic008G054150--Sobic006G057500 Sobic004G341000 Sobic004G341000 Sobic008G054150--Sobic004G341000 Sobic004G311750 Sobic004G311750 Sobic008G054150--Sobic004G311750
Octagon: transcription factors


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