Gene annotation
Transcriptome id Sobic.001G348100.2,Sobic.001G348100.1
Synonym Sb01g033360, ACAT2, EMB1276
Functional annotation expressed high in San Chi San (an efficient nitrogen user) (PubMedID : 28697783)
Acetoacetyl-CoA thiolase 2( (PubMedID : 26759170,(PubMedID : 24597475)
acetyl-CoA acetyltransferase, cytosolic, putative, expressed
UniProt A0A1B6QMR1
Pfam PF02803 PF00108
Panther DB PTHR18919 PTHR18919:SF105
NCBI CDD -
KEGG Orthology K00626; ACAT, acetyl-CoA C-acetyltransferase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G48230 : acetoacetyl-CoA thiolase 2
RAP-DB (Rice) LOC_Os09g07830.1 : acetyl-CoA acetyltransferase, cytosolic, putative, expressed
MaizeGDB (Corn) Zm00025a002746 , Zm00025a004866
Brachypodium KQJ81665 , KQJ81666
Barley HORVU5Hr1G052090.11 , HORVU5Hr1G052090.10 , HORVU5Hr1G052090.3 , HORVU5Hr1G052090.2 , HORVU5Hr1G052090.1 , HORVU5Hr1G052090.7 , HORVU5Hr1G052090.6 , HORVU5Hr1G052090.5 , HORVU5Hr1G052090.4 , HORVU5Hr1G052090.9 , HORVU5Hr1G052090.8
Wheat TraesCS5A02G169400 , TraesCS5B02G166200 , TraesCS5B02G166200 , TraesCS2B02G049200 , TraesCS5D02G173800
Populus -


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cDNA sequences
Sobic.001G348100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
2 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
3 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
4 Sobic.002G254500 oxidoreductase, putative, expressed K18160: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
5 Sobic.010G168900 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
6 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
7 Sobic.002G313600 src homology-3 domain protein 3, putative, expressed -
8 Sobic.004G051300 galactosyltransferase, putative, expressed -
9 Sobic.002G332100 expressed protein -
10 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
11 Sobic.007G225300 2-nitropropane dioxygenase family, putative, expressed -
12 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
13 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
14 Sobic.009G193850 - -
15 Sobic.003G312400 dymeclin, putative, expressed -
16 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
17 Sobic.001G313301 - -
18 Sobic.001G480800 Protein strubbelig-receptor family 7(PubMedID : 31721651)@STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
19 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
20 Sobic.001G512000 cyclin-dependent kinase inhibitor, putative, expressed -


Gene co-expression network
sample Sobic001G348100 Sobic001G348100 Sobic001G436100 Sobic001G436100 Sobic001G348100--Sobic001G436100 Sobic001G116000 Sobic001G116000 Sobic001G348100--Sobic001G116000 Sobic001G196100 Sobic001G196100 Sobic001G348100--Sobic001G196100 Sobic002G254500 Sobic002G254500 Sobic001G348100--Sobic002G254500 Sobic010G168900 Sobic010G168900 Sobic001G348100--Sobic010G168900 Sobic003G353400 Sobic003G353400 Sobic001G348100--Sobic003G353400 Sobic002G313600 Sobic002G313600 Sobic001G348100--Sobic002G313600 Sobic004G051300 Sobic004G051300 Sobic001G348100--Sobic004G051300 Sobic002G332100 Sobic002G332100 Sobic001G348100--Sobic002G332100 Sobic001G436100--Sobic001G116000 Sobic001G436100--Sobic001G196100 Sobic009G194200 Sobic009G194200 Sobic001G436100--Sobic009G194200 Sobic001G026600 Sobic001G026600 Sobic001G436100--Sobic001G026600 Sobic004G331900 Sobic004G331900 Sobic001G436100--Sobic004G331900 Sobic002G075500 Sobic002G075500 Sobic001G436100--Sobic002G075500 Sobic001G313301 Sobic001G313301 Sobic001G436100--Sobic001G313301 Sobic004G333100 Sobic004G333100 Sobic001G436100--Sobic004G333100 Sobic003G319000 Sobic003G319000 Sobic001G436100--Sobic003G319000 Sobic001G116000--Sobic001G196100 Sobic001G035400 Sobic001G035400 Sobic001G116000--Sobic001G035400 Sobic007G044400 Sobic007G044400 Sobic001G116000--Sobic007G044400 Sobic007G048700 Sobic007G048700 Sobic001G116000--Sobic007G048700 Sobic001G116000--Sobic002G313600 Sobic008G084100 Sobic008G084100 Sobic001G116000--Sobic008G084100 Sobic001G116000--Sobic001G026600 Sobic004G031800 Sobic004G031800 Sobic001G116000--Sobic004G031800 Sobic004G184000 Sobic004G184000 Sobic001G116000--Sobic004G184000 Sobic001G196100--Sobic001G116000 Sobic001G196100--Sobic007G044400 Sobic001G281900 Sobic001G281900 Sobic001G196100--Sobic001G281900 Sobic001G196100--Sobic001G035400 Sobic001G418000 Sobic001G418000 Sobic001G196100--Sobic001G418000 Sobic002G087000 Sobic002G087000 Sobic001G196100--Sobic002G087000 Sobic001G196100--Sobic003G319000 Sobic003G322300 Sobic003G322300 Sobic001G196100--Sobic003G322300 Sobic001G530800 Sobic001G530800 Sobic001G196100--Sobic001G530800 Sobic003G118400 Sobic003G118400 Sobic002G254500--Sobic003G118400 Sobic006G029400 Sobic006G029400 Sobic002G254500--Sobic006G029400 Sobic002G254500--Sobic001G116000 Sobic007G022700 Sobic007G022700 Sobic002G254500--Sobic007G022700 Sobic010G277000 Sobic010G277000 Sobic002G254500--Sobic010G277000 Sobic001G460500 Sobic001G460500 Sobic002G254500--Sobic001G460500 Sobic009G207200 Sobic009G207200 Sobic002G254500--Sobic009G207200 Sobic002G254500--Sobic001G035400 Sobic002G423500 Sobic002G423500 Sobic002G254500--Sobic002G423500 Sobic010G168900--Sobic001G116000 Sobic003G312400 Sobic003G312400 Sobic010G168900--Sobic003G312400 Sobic003G412800 Sobic003G412800 Sobic010G168900--Sobic003G412800 Sobic010G168900--Sobic007G044400 Sobic004G208100 Sobic004G208100 Sobic010G168900--Sobic004G208100 Sobic009G119700 Sobic009G119700 Sobic010G168900--Sobic009G119700 Sobic001G412500 Sobic001G412500 Sobic010G168900--Sobic001G412500 Sobic001G122100 Sobic001G122100 Sobic010G168900--Sobic001G122100 Sobic010G168900--Sobic001G026600 Sobic004G337900 Sobic004G337900 Sobic003G353400--Sobic004G337900 Sobic001G099100 Sobic001G099100 Sobic003G353400--Sobic001G099100 Sobic007G225300 Sobic007G225300 Sobic003G353400--Sobic007G225300 Sobic006G242100 Sobic006G242100 Sobic003G353400--Sobic006G242100 Sobic009G030200 Sobic009G030200 Sobic003G353400--Sobic009G030200 Sobic007G178200 Sobic007G178200 Sobic003G353400--Sobic007G178200 Sobic003G353400--Sobic003G319000 Sobic010G050900 Sobic010G050900 Sobic003G353400--Sobic010G050900 Sobic003G353400--Sobic003G312400 Sobic002G313600--Sobic001G116000 Sobic002G313600--Sobic007G044400 Sobic002G313600--Sobic001G196100 Sobic003G134800 Sobic003G134800 Sobic002G313600--Sobic003G134800 Sobic002G313600--Sobic001G026600 Sobic001G108400 Sobic001G108400 Sobic002G313600--Sobic001G108400 Sobic002G313600--Sobic001G530800 Sobic002G313600--Sobic001G281900 Sobic003G017500 Sobic003G017500 Sobic002G313600--Sobic003G017500 Sobic004G051300--Sobic001G099100 Sobic002G118700 Sobic002G118700 Sobic004G051300--Sobic002G118700 Sobic009G125900 Sobic009G125900 Sobic004G051300--Sobic009G125900 Sobic004G051300--Sobic002G075500 Sobic009G026101 Sobic009G026101 Sobic004G051300--Sobic009G026101 Sobic002G276600 Sobic002G276600 Sobic004G051300--Sobic002G276600 Sobic009G079100 Sobic009G079100 Sobic004G051300--Sobic009G079100 Sobic010G090500 Sobic010G090500 Sobic004G051300--Sobic010G090500 Sobic009G063400 Sobic009G063400 Sobic004G051300--Sobic009G063400 Sobic002G332100--Sobic002G075500 Sobic002G332100--Sobic001G436100 Sobic004G212100 Sobic004G212100 Sobic002G332100--Sobic004G212100 Sobic002G342500 Sobic002G342500 Sobic002G332100--Sobic002G342500 Sobic002G332100--Sobic001G196100 Sobic001G338400 Sobic001G338400 Sobic002G332100--Sobic001G338400 Sobic002G332100--Sobic001G116000 Sobic010G060600 Sobic010G060600 Sobic002G332100--Sobic010G060600 Sobic010G253300 Sobic010G253300 Sobic002G332100--Sobic010G253300
Octagon: transcription factors


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