Gene annotation
Transcriptome id Sobic.001G429700.1
Synonym Sb01g040410
Functional annotation expressed protein
UniProt C5WQ79
Pfam PF11250
Panther DB PTHR33155 PTHR33155:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22090 : Protein of unknown function (DUF3049)
RAP-DB (Rice) LOC_Os03g15530.1 : expressed protein
MaizeGDB (Corn) Zm00025a001689 , Zm00025a052823
Brachypodium KQK13573 , KQK22468
Barley HORVU4Hr1G061680.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G429700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G239800 - -
2 Sobic.009G127500 Alpha amylase, catalytic domain containing protein, expressed -
3 Sobic.002G004600 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.001G057100 plant-specific domain TIGR01615 family protein, expressed -
5 Sobic.009G123700 NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
6 Sobic.003G288401 - -
7 Sobic.004G282900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
8 Sobic.003G301800 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
9 Sobic.002G165700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.007G069000 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
11 Sobic.002G383700 4-alpha-glucanotransferase, chloroplast precursor, putative, expressed K00705: 4-alpha-glucanotransferase
12 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
13 Sobic.003G291800 hexokinase, putative, expressed K00844: hexokinase
14 Sobic.001G282800 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
15 Sobic.009G200200 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]"(PubMedID : 26186930)@Trehalose-6-phosphate synthase(PubMedID : 26320239)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
16 Sobic.004G290100 glutathione peroxidase, putative, expressed -
17 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
18 Sobic.009G008200 STE_PAK_Ste20++TranslationKinase_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
19 Sobic.010G270100 OsFBX79 - F-box domain containing protein, expressed -
20 Sobic.001G178100 inositol-1-monophosphatase, putative, expressed K10047: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase


Gene co-expression network
sample Sobic001G429700 Sobic001G429700 Sobic004G239800 Sobic004G239800 Sobic001G429700--Sobic004G239800 Sobic009G127500 Sobic009G127500 Sobic001G429700--Sobic009G127500 Sobic002G004600 Sobic002G004600 Sobic001G429700--Sobic002G004600 Sobic001G057100 Sobic001G057100 Sobic001G429700--Sobic001G057100 Sobic009G123700 Sobic009G123700 Sobic001G429700--Sobic009G123700 Sobic003G288401 Sobic003G288401 Sobic001G429700--Sobic003G288401 Sobic004G282900 Sobic004G282900 Sobic001G429700--Sobic004G282900 Sobic003G301800 Sobic003G301800 Sobic001G429700--Sobic003G301800 Sobic002G165700 Sobic002G165700 Sobic001G429700--Sobic002G165700 Sobic004G239800--Sobic009G123700 Sobic007G102300 Sobic007G102300 Sobic004G239800--Sobic007G102300 Sobic002G339666 Sobic002G339666 Sobic004G239800--Sobic002G339666 Sobic010G270100 Sobic010G270100 Sobic004G239800--Sobic010G270100 Sobic003G005500 Sobic003G005500 Sobic004G239800--Sobic003G005500 Sobic001G010500 Sobic001G010500 Sobic004G239800--Sobic001G010500 Sobic009G163400 Sobic009G163400 Sobic004G239800--Sobic009G163400 Sobic008G141900 Sobic008G141900 Sobic004G239800--Sobic008G141900 Sobic001G485700 Sobic001G485700 Sobic004G239800--Sobic001G485700 Sobic001G178100 Sobic001G178100 Sobic009G127500--Sobic001G178100 Sobic002G407000 Sobic002G407000 Sobic009G127500--Sobic002G407000 Sobic010G047700 Sobic010G047700 Sobic009G127500--Sobic010G047700 Sobic001G116500 Sobic001G116500 Sobic009G127500--Sobic001G116500 Sobic004G064300 Sobic004G064300 Sobic009G127500--Sobic004G064300 Sobic001G067700 Sobic001G067700 Sobic009G127500--Sobic001G067700 Sobic001G282800 Sobic001G282800 Sobic009G127500--Sobic001G282800 Sobic010G134000 Sobic010G134000 Sobic009G127500--Sobic010G134000 Sobic003G375700 Sobic003G375700 Sobic009G127500--Sobic003G375700 Sobic002G004600--Sobic001G282800 Sobic003G310300 Sobic003G310300 Sobic002G004600--Sobic003G310300 Sobic003G150500 Sobic003G150500 Sobic002G004600--Sobic003G150500 Sobic002G004600--Sobic002G407000 Sobic002G004600--Sobic010G134000 Sobic002G043800 Sobic002G043800 Sobic002G004600--Sobic002G043800 Sobic003G107500 Sobic003G107500 Sobic002G004600--Sobic003G107500 Sobic002G004600--Sobic001G116500 Sobic009G200200 Sobic009G200200 Sobic002G004600--Sobic009G200200 Sobic004G097200 Sobic004G097200 Sobic001G057100--Sobic004G097200 Sobic009G245000 Sobic009G245000 Sobic001G057100--Sobic009G245000 Sobic009G231800 Sobic009G231800 Sobic001G057100--Sobic009G231800 Sobic003G288800 Sobic003G288800 Sobic001G057100--Sobic003G288800 Sobic005G132000 Sobic005G132000 Sobic001G057100--Sobic005G132000 Sobic009G040400 Sobic009G040400 Sobic001G057100--Sobic009G040400 Sobic008G002400 Sobic008G002400 Sobic001G057100--Sobic008G002400 Sobic004G125800 Sobic004G125800 Sobic001G057100--Sobic004G125800 Sobic003G277400 Sobic003G277400 Sobic001G057100--Sobic003G277400 Sobic009G123700--Sobic004G239800 Sobic009G123700--Sobic007G102300 Sobic006G119900 Sobic006G119900 Sobic009G123700--Sobic006G119900 Sobic001G076600 Sobic001G076600 Sobic009G123700--Sobic001G076600 Sobic009G123700--Sobic010G270100 Sobic006G193400 Sobic006G193400 Sobic009G123700--Sobic006G193400 Sobic009G046900 Sobic009G046900 Sobic009G123700--Sobic009G046900 Sobic003G178800 Sobic003G178800 Sobic009G123700--Sobic003G178800 Sobic010G058300 Sobic010G058300 Sobic009G123700--Sobic010G058300 Sobic004G118800 Sobic004G118800 Sobic003G288401--Sobic004G118800 Sobic004G344400 Sobic004G344400 Sobic003G288401--Sobic004G344400 Sobic003G078300 Sobic003G078300 Sobic003G288401--Sobic003G078300 Sobic003G197100 Sobic003G197100 Sobic003G288401--Sobic003G197100 Sobic001G103800 Sobic001G103800 Sobic003G288401--Sobic001G103800 Sobic002G001100 Sobic002G001100 Sobic003G288401--Sobic002G001100 Sobic001G286400 Sobic001G286400 Sobic003G288401--Sobic001G286400 Sobic001G522300 Sobic001G522300 Sobic003G288401--Sobic001G522300 Sobic009G099150 Sobic009G099150 Sobic003G288401--Sobic009G099150 Sobic002G052000 Sobic002G052000 Sobic004G282900--Sobic002G052000 Sobic003G188200 Sobic003G188200 Sobic004G282900--Sobic003G188200 Sobic004G323400 Sobic004G323400 Sobic004G282900--Sobic004G323400 Sobic004G282900--Sobic009G245000 Sobic002G052100 Sobic002G052100 Sobic004G282900--Sobic002G052100 Sobic001G181100 Sobic001G181100 Sobic004G282900--Sobic001G181100 Sobic001G104900 Sobic001G104900 Sobic004G282900--Sobic001G104900 Sobic005G002400 Sobic005G002400 Sobic004G282900--Sobic005G002400 Sobic002G338800 Sobic002G338800 Sobic004G282900--Sobic002G338800 Sobic002G052800 Sobic002G052800 Sobic003G301800--Sobic002G052800 Sobic003G301800--Sobic006G119900 Sobic006G189000 Sobic006G189000 Sobic003G301800--Sobic006G189000 Sobic010G009700 Sobic010G009700 Sobic003G301800--Sobic010G009700 Sobic002G151500 Sobic002G151500 Sobic003G301800--Sobic002G151500 Sobic007G105700 Sobic007G105700 Sobic003G301800--Sobic007G105700 Sobic005G060100 Sobic005G060100 Sobic003G301800--Sobic005G060100 Sobic009G168100 Sobic009G168100 Sobic003G301800--Sobic009G168100 Sobic009G125800 Sobic009G125800 Sobic003G301800--Sobic009G125800 Sobic002G060400 Sobic002G060400 Sobic002G165700--Sobic002G060400 Sobic002G165700--Sobic009G123700 Sobic008G116700 Sobic008G116700 Sobic002G165700--Sobic008G116700 Sobic009G008200 Sobic009G008200 Sobic002G165700--Sobic009G008200 Sobic002G069000 Sobic002G069000 Sobic002G165700--Sobic002G069000 Sobic007G016750 Sobic007G016750 Sobic002G165700--Sobic007G016750 Sobic002G165700--Sobic010G134000 Sobic003G433400 Sobic003G433400 Sobic002G165700--Sobic003G433400 Sobic002G076500 Sobic002G076500 Sobic002G165700--Sobic002G076500
Octagon: transcription factors


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