Gene annotation
Transcriptome id Sobic.001G472500.1
Synonym Sb01g044270
Functional annotation yippee zinc-binding protein, putative, expressed
UniProt C5WUR1
Pfam PF03226
Panther DB PTHR13848
NCBI CDD KOG3399; Predicted Yippee-type zinc-binding protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53940 : Yippee family putative zinc-binding protein
RAP-DB (Rice) LOC_Os03g09290.1 : yippee zinc-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a053188
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G472500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
2 Sobic.003G005200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
3 Sobic.004G339200 CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed -
4 Sobic.002G378300 ADP-ribosylation factor, putative, expressed K07952: ADP-ribosylation factor related protein 1
5 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
6 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
7 Sobic.003G021200 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
8 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
9 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.001G398950 - -
11 Sobic.010G058900 BSD domain containing protein, expressed -
12 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
13 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
14 Sobic.001G289400 expressed protein -
15 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
16 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
17 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
18 Sobic.006G225300 expressed protein -
19 Sobic.010G080200 emp24/gp25L/p24 family protein, putative, expressed -
20 Sobic.003G261400 DUF292 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G472500 Sobic001G472500 Sobic001G010700 Sobic001G010700 Sobic001G472500--Sobic001G010700 Sobic003G005200 Sobic003G005200 Sobic001G472500--Sobic003G005200 Sobic004G339200 Sobic004G339200 Sobic001G472500--Sobic004G339200 Sobic002G378300 Sobic002G378300 Sobic001G472500--Sobic002G378300 Sobic003G043400 Sobic003G043400 Sobic001G472500--Sobic003G043400 Sobic001G439600 Sobic001G439600 Sobic001G472500--Sobic001G439600 Sobic003G021200 Sobic003G021200 Sobic001G472500--Sobic003G021200 Sobic002G352700 Sobic002G352700 Sobic001G472500--Sobic002G352700 Sobic002G256300 Sobic002G256300 Sobic001G472500--Sobic002G256300 Sobic007G176200 Sobic007G176200 Sobic001G010700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G010700--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic001G010700--Sobic001G458700 Sobic003G330500 Sobic003G330500 Sobic001G010700--Sobic003G330500 Sobic004G335000 Sobic004G335000 Sobic001G010700--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic001G010700--Sobic002G428200 Sobic004G224900 Sobic004G224900 Sobic001G010700--Sobic004G224900 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800 Sobic002G300700 Sobic002G300700 Sobic003G005200--Sobic002G300700 Sobic009G160600 Sobic009G160600 Sobic003G005200--Sobic009G160600 Sobic001G360200 Sobic001G360200 Sobic003G005200--Sobic001G360200 Sobic006G225300 Sobic006G225300 Sobic003G005200--Sobic006G225300 Sobic002G281300 Sobic002G281300 Sobic003G005200--Sobic002G281300 Sobic004G091200 Sobic004G091200 Sobic003G005200--Sobic004G091200 Sobic003G038600 Sobic003G038600 Sobic003G005200--Sobic003G038600 Sobic003G005200--Sobic003G021200 Sobic009G058500 Sobic009G058500 Sobic003G005200--Sobic009G058500 Sobic001G078500 Sobic001G078500 Sobic004G339200--Sobic001G078500 Sobic002G400000 Sobic002G400000 Sobic004G339200--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic004G339200--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic004G339200--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic004G339200--Sobic003G007500 Sobic009G198500 Sobic009G198500 Sobic004G339200--Sobic009G198500 Sobic001G433400 Sobic001G433400 Sobic004G339200--Sobic001G433400 Sobic004G339200--Sobic001G439600 Sobic007G186300 Sobic007G186300 Sobic004G339200--Sobic007G186300 Sobic002G378300--Sobic002G256300 Sobic002G378300--Sobic006G225300 Sobic001G313500 Sobic001G313500 Sobic002G378300--Sobic001G313500 Sobic002G090700 Sobic002G090700 Sobic002G378300--Sobic002G090700 Sobic002G378300--Sobic003G038600 Sobic002G040700 Sobic002G040700 Sobic002G378300--Sobic002G040700 Sobic009G160200 Sobic009G160200 Sobic002G378300--Sobic009G160200 Sobic002G378300--Sobic003G007500 Sobic003G201900 Sobic003G201900 Sobic002G378300--Sobic003G201900 Sobic003G043400--Sobic002G423800 Sobic003G043400--Sobic001G010700 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic003G043400--Sobic004G335000 Sobic007G152400 Sobic007G152400 Sobic003G043400--Sobic007G152400 Sobic006G222400 Sobic006G222400 Sobic003G043400--Sobic006G222400 Sobic003G124800 Sobic003G124800 Sobic001G439600--Sobic003G124800 Sobic002G129000 Sobic002G129000 Sobic001G439600--Sobic002G129000 Sobic010G083700 Sobic010G083700 Sobic001G439600--Sobic010G083700 Sobic001G294900 Sobic001G294900 Sobic001G439600--Sobic001G294900 Sobic001G136900 Sobic001G136900 Sobic001G439600--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic001G439600--Sobic001G054200 Sobic001G439600--Sobic010G168600 Sobic001G439600--Sobic002G256300 Sobic001G529000 Sobic001G529000 Sobic001G439600--Sobic001G529000 Sobic003G021200--Sobic001G010700 Sobic003G021200--Sobic006G222400 Sobic010G017000 Sobic010G017000 Sobic003G021200--Sobic010G017000 Sobic003G021200--Sobic003G043400 Sobic003G021200--Sobic004G335000 Sobic001G402300 Sobic001G402300 Sobic003G021200--Sobic001G402300 Sobic003G021200--Sobic002G428200 Sobic010G238700 Sobic010G238700 Sobic003G021200--Sobic010G238700 Sobic006G127000 Sobic006G127000 Sobic003G021200--Sobic006G127000 Sobic002G352700--Sobic010G168600 Sobic010G253800 Sobic010G253800 Sobic002G352700--Sobic010G253800 Sobic001G057800 Sobic001G057800 Sobic002G352700--Sobic001G057800 Sobic002G352700--Sobic002G256300 Sobic002G352700--Sobic003G007500 Sobic004G203100 Sobic004G203100 Sobic002G352700--Sobic004G203100 Sobic002G352700--Sobic010G083700 Sobic009G246950 Sobic009G246950 Sobic002G352700--Sobic009G246950 Sobic008G180900 Sobic008G180900 Sobic002G352700--Sobic008G180900 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic004G104900 Sobic004G104900 Sobic002G256300--Sobic004G104900 Sobic002G256300--Sobic010G168600 Sobic002G256300--Sobic001G136900 Sobic010G193800 Sobic010G193800 Sobic002G256300--Sobic010G193800 Sobic002G256300--Sobic001G439600 Sobic006G263900 Sobic006G263900 Sobic002G256300--Sobic006G263900 Sobic002G256300--Sobic009G171700
Octagon: transcription factors


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