Gene annotation
Transcriptome id Sobic.001G521750.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBP1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
2 Sobic.005G026400 pentatricopeptide repeat domain containing protein, putative, expressed -
3 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
4 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
5 Sobic.003G308500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
6 Sobic.002G356200 GCN5-related N-acetyltransferase, putative, expressed K14682: amino-acid N-acetyltransferase
7 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
8 Sobic.001G376200 auxin response factor, putative, expressed -
9 Sobic.003G146600 pumilio-family RNA binding repeat containing protein, expressed K14790: nucleolar protein 9
10 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
11 Sobic.002G016200 STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.001G332700 pentatricopeptide repeat protein PPR986-12, putative, expressed -
13 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
14 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
15 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
16 Sobic.001G155400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta
17 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
18 Sobic.001G308400 expressed protein -
19 Sobic.003G256800 RNA polymerase III subunit RPC82 family protein, putative, expressed K03023: RPC3, DNA-directed RNA polymerase III subunit RPC3
20 Sobic.008G092800 expressed protein -


Gene co-expression network
sample Sobic001G521750 Sobic001G521750 Sobic010G034100 Sobic010G034100 Sobic001G521750--Sobic010G034100 Sobic005G026400 Sobic005G026400 Sobic001G521750--Sobic005G026400 Sobic002G227500 Sobic002G227500 Sobic001G521750--Sobic002G227500 Sobic009G192300 Sobic009G192300 Sobic001G521750--Sobic009G192300 Sobic003G308500 Sobic003G308500 Sobic001G521750--Sobic003G308500 Sobic002G356200 Sobic002G356200 Sobic001G521750--Sobic002G356200 Sobic003G120300 Sobic003G120300 Sobic001G521750--Sobic003G120300 Sobic001G376200 Sobic001G376200 Sobic001G521750--Sobic001G376200 Sobic003G146600 Sobic003G146600 Sobic001G521750--Sobic003G146600 Sobic010G059500 Sobic010G059500 Sobic010G034100--Sobic010G059500 Sobic001G035200 Sobic001G035200 Sobic010G034100--Sobic001G035200 Sobic010G034100--Sobic009G192300 Sobic001G405600 Sobic001G405600 Sobic010G034100--Sobic001G405600 Sobic009G084900 Sobic009G084900 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic006G252900 Sobic006G252900 Sobic010G034100--Sobic006G252900 Sobic010G034100--Sobic002G227500 Sobic002G398700 Sobic002G398700 Sobic005G026400--Sobic002G398700 Sobic005G026400--Sobic003G146600 Sobic004G224600 Sobic004G224600 Sobic005G026400--Sobic004G224600 Sobic002G235200 Sobic002G235200 Sobic005G026400--Sobic002G235200 Sobic005G026400--Sobic003G308500 Sobic005G026400--Sobic002G356200 Sobic003G012000 Sobic003G012000 Sobic005G026400--Sobic003G012000 Sobic003G143800 Sobic003G143800 Sobic005G026400--Sobic003G143800 Sobic001G015400 Sobic001G015400 Sobic005G026400--Sobic001G015400 Sobic001G308400 Sobic001G308400 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic001G156900 Sobic001G156900 Sobic002G227500--Sobic001G156900 Sobic010G169900 Sobic010G169900 Sobic002G227500--Sobic010G169900 Sobic004G265500 Sobic004G265500 Sobic002G227500--Sobic004G265500 Sobic003G043000 Sobic003G043000 Sobic002G227500--Sobic003G043000 Sobic003G405500 Sobic003G405500 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic002G227500--Sobic010G059500 Sobic004G096400 Sobic004G096400 Sobic009G192300--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic009G192300--Sobic006G234700 Sobic009G192300--Sobic010G059500 Sobic009G192300--Sobic010G034100 Sobic009G192300--Sobic009G084900 Sobic003G444800 Sobic003G444800 Sobic009G192300--Sobic003G444800 Sobic002G260400 Sobic002G260400 Sobic009G192300--Sobic002G260400 SobicK028600 SobicK028600 Sobic009G192300--SobicK028600 Sobic007G125000 Sobic007G125000 Sobic009G192300--Sobic007G125000 Sobic003G308500--Sobic003G146600 Sobic006G125500 Sobic006G125500 Sobic003G308500--Sobic006G125500 Sobic003G296900 Sobic003G296900 Sobic003G308500--Sobic003G296900 Sobic006G002800 Sobic006G002800 Sobic003G308500--Sobic006G002800 Sobic004G019200 Sobic004G019200 Sobic003G308500--Sobic004G019200 Sobic002G371600 Sobic002G371600 Sobic003G308500--Sobic002G371600 Sobic003G308500--Sobic003G012000 Sobic001G145400 Sobic001G145400 Sobic003G308500--Sobic001G145400 Sobic006G245900 Sobic006G245900 Sobic003G308500--Sobic006G245900 Sobic002G356200--Sobic005G026400 Sobic002G356200--Sobic009G192300 Sobic002G356200--Sobic006G234700 Sobic001G340300 Sobic001G340300 Sobic002G356200--Sobic001G340300 Sobic009G251200 Sobic009G251200 Sobic002G356200--Sobic009G251200 Sobic009G194000 Sobic009G194000 Sobic002G356200--Sobic009G194000 Sobic006G155100 Sobic006G155100 Sobic002G356200--Sobic006G155100 Sobic002G356200--Sobic003G012000 Sobic002G292800 Sobic002G292800 Sobic002G356200--Sobic002G292800 Sobic002G424900 Sobic002G424900 Sobic003G120300--Sobic002G424900 Sobic009G129100 Sobic009G129100 Sobic003G120300--Sobic009G129100 Sobic006G216100 Sobic006G216100 Sobic003G120300--Sobic006G216100 Sobic001G455600 Sobic001G455600 Sobic003G120300--Sobic001G455600 Sobic003G120300--Sobic010G034100 Sobic009G107300 Sobic009G107300 Sobic003G120300--Sobic009G107300 Sobic007G017800 Sobic007G017800 Sobic003G120300--Sobic007G017800 Sobic002G042800 Sobic002G042800 Sobic003G120300--Sobic002G042800 Sobic002G425500 Sobic002G425500 Sobic003G120300--Sobic002G425500 Sobic001G376200--Sobic003G444800 Sobic002G016200 Sobic002G016200 Sobic001G376200--Sobic002G016200 Sobic001G376200--SobicK028600 Sobic007G147400 Sobic007G147400 Sobic001G376200--Sobic007G147400 Sobic001G376200--Sobic009G192300 Sobic001G376200--Sobic001G308400 Sobic001G376200--Sobic010G169900 Sobic010G226000 Sobic010G226000 Sobic001G376200--Sobic010G226000 Sobic002G103600 Sobic002G103600 Sobic001G376200--Sobic002G103600 Sobic003G146600--Sobic003G308500 Sobic003G146600--Sobic004G224600 Sobic003G146600--Sobic006G002800 Sobic003G146600--Sobic002G235200 Sobic003G146600--Sobic001G145400 Sobic002G150700 Sobic002G150700 Sobic003G146600--Sobic002G150700 Sobic001G065100 Sobic001G065100 Sobic003G146600--Sobic001G065100 Sobic003G039000 Sobic003G039000 Sobic003G146600--Sobic003G039000 Sobic003G146600--Sobic003G012000
Octagon: transcription factors


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