Gene annotation
Transcriptome id Sobic.002G016200.1,Sobic.002G016200.2
Synonym MAPKKK5, Sb02g001590
Functional annotation STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt C5X808 , A0A1W0W1S8
Pfam PF14531
Panther DB PTHR24361 PTHR24361:SF389
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66850 : mitogen-activated protein kinase kinase kinase 5
RAP-DB (Rice) LOC_Os07g02780.1 : STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a008282 , Zm00025a016735 , Zm00025a016219
Brachypodium KQK21115 , KQK13043
Barley HORVU2Hr1G062700.13 , HORVU2Hr1G062700.12 , HORVU2Hr1G062700.11 , HORVU2Hr1G062700.10 , HORVU2Hr1G062700.17 , HORVU2Hr1G062700.16 , HORVU2Hr1G062700.15 , HORVU2Hr1G062700.14 , HORVU2Hr1G062700.18 , HORVU2Hr1G062700.3 , HORVU2Hr1G062700.2 , HORVU2Hr1G062700.1 , HORVU2Hr1G062700.7 , HORVU2Hr1G062700.6 , HORVU2Hr1G062700.5 , HORVU2Hr1G062700.4 , HORVU2Hr1G062700.9 , HORVU2Hr1G062700.8
Wheat TraesCS5A02G401400 , TraesCS5A02G401400 , TraesCS2D02G259300 , TraesCS2D02G259300 , TraesCS2D02G259300 , TraesCS4D02G089900 , TraesCS4B02G093200 , TraesCS4B02G093200 , TraesCS2B02G277400 , TraesCS2B02G277400 , TraesCS2B02G277400 , TraesCS2A02G264600 , TraesCS2A02G264600
Populus -


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cDNA sequences
Sobic.002G016200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G376200 auxin response factor, putative, expressed -
2 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
3 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
4 Sobic.001G490900 growth regulator related protein, putative, expressed -
5 Sobic.009G122500 expressed protein -
6 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
7 Sobic.001G308400 expressed protein -
8 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
9 Sobic.K028600 expressed protein -
10 Sobic.003G444800 expressed protein -
11 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
12 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
13 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
14 Sobic.002G079000 expressed protein -
15 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
16 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.009G249700 expressed protein -
18 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
19 Sobic.007G147400 - -
20 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O


Gene co-expression network
sample Sobic002G016200 Sobic002G016200 Sobic001G376200 Sobic001G376200 Sobic002G016200--Sobic001G376200 Sobic010G169900 Sobic010G169900 Sobic002G016200--Sobic010G169900 Sobic009G192300 Sobic009G192300 Sobic002G016200--Sobic009G192300 Sobic001G490900 Sobic001G490900 Sobic002G016200--Sobic001G490900 Sobic009G122500 Sobic009G122500 Sobic002G016200--Sobic009G122500 Sobic003G181700 Sobic003G181700 Sobic002G016200--Sobic003G181700 Sobic001G308400 Sobic001G308400 Sobic002G016200--Sobic001G308400 Sobic010G034100 Sobic010G034100 Sobic002G016200--Sobic010G034100 SobicK028600 SobicK028600 Sobic002G016200--SobicK028600 Sobic003G444800 Sobic003G444800 Sobic001G376200--Sobic003G444800 Sobic001G376200--Sobic002G016200 Sobic001G376200--SobicK028600 Sobic007G147400 Sobic007G147400 Sobic001G376200--Sobic007G147400 Sobic001G376200--Sobic009G192300 Sobic001G376200--Sobic001G308400 Sobic001G376200--Sobic010G169900 Sobic010G226000 Sobic010G226000 Sobic001G376200--Sobic010G226000 Sobic002G103600 Sobic002G103600 Sobic001G376200--Sobic002G103600 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic006G128100 Sobic006G128100 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic010G169900--Sobic001G490900 Sobic004G096400 Sobic004G096400 Sobic009G192300--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic009G192300--Sobic006G234700 Sobic010G059500 Sobic010G059500 Sobic009G192300--Sobic010G059500 Sobic009G192300--Sobic010G034100 Sobic009G084900 Sobic009G084900 Sobic009G192300--Sobic009G084900 Sobic009G192300--Sobic003G444800 Sobic002G260400 Sobic002G260400 Sobic009G192300--Sobic002G260400 Sobic009G192300--SobicK028600 Sobic007G125000 Sobic007G125000 Sobic009G192300--Sobic007G125000 Sobic001G490900--Sobic009G194000 Sobic006G060000 Sobic006G060000 Sobic001G490900--Sobic006G060000 Sobic001G114200 Sobic001G114200 Sobic001G490900--Sobic001G114200 Sobic001G490900--Sobic010G169900 Sobic001G490900--Sobic003G181700 Sobic001G490900--Sobic002G079000 Sobic001G490900--Sobic009G122500 Sobic007G172700 Sobic007G172700 Sobic001G490900--Sobic007G172700 Sobic001G141400 Sobic001G141400 Sobic001G490900--Sobic001G141400 Sobic001G335000 Sobic001G335000 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic003G181700--Sobic009G194000 Sobic003G021600 Sobic003G021600 Sobic003G181700--Sobic003G021600 Sobic003G181700--Sobic004G122900 Sobic003G181700--Sobic001G490900 Sobic003G181700--Sobic010G169900 Sobic003G181700--Sobic002G227500 Sobic003G181700--Sobic006G060000 Sobic003G181700--Sobic009G122500 Sobic003G181700--Sobic007G172700 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G308400--Sobic001G156900 Sobic001G308400--Sobic003G394200 Sobic010G034100--Sobic010G059500 Sobic001G035200 Sobic001G035200 Sobic010G034100--Sobic001G035200 Sobic010G034100--Sobic009G192300 Sobic001G405600 Sobic001G405600 Sobic010G034100--Sobic001G405600 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic006G252900 Sobic006G252900 Sobic010G034100--Sobic006G252900 Sobic010G034100--Sobic002G227500 SobicK028600--Sobic003G444800 SobicK028600--Sobic004G357100 SobicK028600--Sobic001G308400 SobicK028600--Sobic002G103600 Sobic007G042400 Sobic007G042400 SobicK028600--Sobic007G042400 Sobic006G116100 Sobic006G116100 SobicK028600--Sobic006G116100 SobicK028600--Sobic003G043000 SobicK028600--Sobic006G234700 Sobic002G063900 Sobic002G063900 SobicK028600--Sobic002G063900
Octagon: transcription factors


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