Gene annotation
Transcriptome id Sobic.001G532000.1
Synonym PP2-A13, Sb01g049500, AtPP2-A13
Functional annotation OsFBX76 - F-box domain containing protein, expressed
UniProt C5X109
Pfam PF14299
Panther DB PTHR31960 PTHR31960:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61060 : phloem protein 2-A13
RAP-DB (Rice) LOC_Os03g02550.1 : OsFBX76 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000234 , Zm00025a003079
Brachypodium -
Barley HORVU4Hr1G086110.1
Wheat TraesCS4B02G356300 , TraesCS4D02G350000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
3 Sobic.006G173000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
4 Sobic.010G124001 - -
5 Sobic.007G037100 MYB family transcription factor, putative, expressed -
6 Sobic.007G145200 serine esterase family protein, putative, expressed -
7 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
8 Sobic.004G208400 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
9 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
10 Sobic.001G333200 RING zinc finger protein-like, putative, expressed -
11 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
12 Sobic.007G173200 IDD5(PubMedID : 24676859)@ZOS8-12 - C2H2 zinc finger protein, expressed -
13 Sobic.009G140500 no apical meristem protein, putative, expressed -
14 Sobic.005G028400 "Ca ATPase, IIB type"(PubMedID : 22196357)@Autoihibited Ca2+ - ATPase 11(PubMedID : 26320239)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
15 Sobic.004G065650 - -
16 Sobic.001G067850 - -
17 Sobic.006G137400 - -
18 Sobic.004G212800 - -
19 Sobic.002G115801 - -
20 Sobic.001G439500 acyl CoA binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G532000 Sobic001G532000 Sobic007G211000 Sobic007G211000 Sobic001G532000--Sobic007G211000 Sobic006G082600 Sobic006G082600 Sobic001G532000--Sobic006G082600 Sobic006G173000 Sobic006G173000 Sobic001G532000--Sobic006G173000 Sobic010G124001 Sobic010G124001 Sobic001G532000--Sobic010G124001 Sobic007G037100 Sobic007G037100 Sobic001G532000--Sobic007G037100 Sobic007G145200 Sobic007G145200 Sobic001G532000--Sobic007G145200 Sobic001G222300 Sobic001G222300 Sobic001G532000--Sobic001G222300 Sobic004G208400 Sobic004G208400 Sobic001G532000--Sobic004G208400 Sobic001G024200 Sobic001G024200 Sobic001G532000--Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic004G112500 Sobic004G112500 Sobic007G211000--Sobic004G112500 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic010G248200 Sobic010G248200 Sobic007G211000--Sobic010G248200 Sobic001G162300 Sobic001G162300 Sobic006G082600--Sobic001G162300 Sobic007G178700 Sobic007G178700 Sobic006G082600--Sobic007G178700 Sobic006G082600--Sobic007G037100 Sobic001G251700 Sobic001G251700 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic006G082600--Sobic010G124001 Sobic009G127900 Sobic009G127900 Sobic006G082600--Sobic009G127900 Sobic002G157000 Sobic002G157000 Sobic006G082600--Sobic002G157000 Sobic006G173000--Sobic004G208400 Sobic002G291700 Sobic002G291700 Sobic006G173000--Sobic002G291700 Sobic001G484800 Sobic001G484800 Sobic006G173000--Sobic001G484800 Sobic004G065650 Sobic004G065650 Sobic006G173000--Sobic004G065650 Sobic006G173000--Sobic007G037100 Sobic005G110472 Sobic005G110472 Sobic006G173000--Sobic005G110472 Sobic004G188400 Sobic004G188400 Sobic006G173000--Sobic004G188400 Sobic006G225200 Sobic006G225200 Sobic006G173000--Sobic006G225200 Sobic006G173000--Sobic001G532000 Sobic010G124001--Sobic007G211000 Sobic002G203200 Sobic002G203200 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic010G124001--Sobic004G112500 Sobic010G124001--Sobic006G082600 Sobic001G271900 Sobic001G271900 Sobic010G124001--Sobic001G271900 Sobic001G543900 Sobic001G543900 Sobic010G124001--Sobic001G543900 Sobic007G037900 Sobic007G037900 Sobic010G124001--Sobic007G037900 Sobic010G124001--Sobic007G037100 Sobic007G037100--Sobic006G082600 Sobic007G037100--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic007G037100--Sobic008G116500 Sobic002G001600 Sobic002G001600 Sobic007G037100--Sobic002G001600 Sobic007G037100--Sobic010G124001 Sobic007G037100--Sobic007G211000 Sobic007G078000 Sobic007G078000 Sobic007G037100--Sobic007G078000 Sobic007G037100--Sobic001G162300 Sobic002G283300 Sobic002G283300 Sobic007G037100--Sobic002G283300 Sobic003G220200 Sobic003G220200 Sobic007G145200--Sobic003G220200 Sobic010G026400 Sobic010G026400 Sobic007G145200--Sobic010G026400 Sobic007G145200--Sobic006G082600 Sobic001G451000 Sobic001G451000 Sobic007G145200--Sobic001G451000 Sobic007G145200--Sobic009G127900 Sobic001G446900 Sobic001G446900 Sobic007G145200--Sobic001G446900 Sobic002G157300 Sobic002G157300 Sobic007G145200--Sobic002G157300 Sobic004G290800 Sobic004G290800 Sobic007G145200--Sobic004G290800 Sobic001G486300 Sobic001G486300 Sobic007G145200--Sobic001G486300 Sobic001G222300--Sobic007G037100 Sobic005G162600 Sobic005G162600 Sobic001G222300--Sobic005G162600 Sobic008G101800 Sobic008G101800 Sobic001G222300--Sobic008G101800 Sobic001G222300--Sobic007G211000 Sobic004G188300 Sobic004G188300 Sobic001G222300--Sobic004G188300 Sobic001G222300--Sobic002G001600 Sobic001G222300--Sobic001G451000 Sobic001G222300--Sobic008G116500 Sobic002G284200 Sobic002G284200 Sobic001G222300--Sobic002G284200 Sobic004G208400--Sobic006G173000 Sobic004G208400--Sobic002G291700 Sobic004G279300 Sobic004G279300 Sobic004G208400--Sobic004G279300 Sobic004G208400--Sobic007G211000 Sobic006G137400 Sobic006G137400 Sobic004G208400--Sobic006G137400 Sobic003G121400 Sobic003G121400 Sobic004G208400--Sobic003G121400 Sobic004G096200 Sobic004G096200 Sobic004G208400--Sobic004G096200 Sobic004G208400--Sobic007G037100 Sobic001G515600 Sobic001G515600 Sobic004G208400--Sobic001G515600 Sobic001G024200--Sobic004G212800 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic001G024200--Sobic010G248200
Octagon: transcription factors


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