Gene annotation
Transcriptome id Sobic.002G052900.2
Synonym COAD, ATCOAD, Sb02g004440
Functional annotation cytidylyltransferase domain containing protein, expressed
UniProt A0A1W0W2D1
Pfam PF01467
Panther DB PTHR10695 PTHR10695:SF33
NCBI CDD -
KEGG Orthology K02201; pantetheine-phosphate adenylyltransferase
Gene Ontology GO:0009058; biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT2G18250 : 4-phosphopantetheine adenylyltransferase
RAP-DB (Rice) LOC_Os07g08210.1 : cytidylyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045174
Brachypodium KQK20596
Barley -
Wheat TraesCS6B02G265500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G124300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G253000 AGAP000425-PA, putative, expressed K13120: protein FAM32A
3 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
4 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
5 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.002G352600 expressed protein -
7 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
8 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
9 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
10 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
11 Sobic.004G094300 protein kinase domain containing protein, expressed K04424: ZAK, sterile alpha motif and leucine zipper containing kinase AZK
12 Sobic.003G295400 MAC/Perforin domain containing protein, putative, expressed -
13 Sobic.001G031200 Methyltransferase small domain containing protein, expressed K02493: hemK, prmC, release factor glutamine methyltransferase
14 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
15 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
16 Sobic.004G305600 SKIP/SNW domain containing protein, expressed K06063: SNW1, SKIIP, SNW domain-containing protein 1
17 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
18 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
19 Sobic.008G128600 miro, putative, expressed K07953: GTP-binding protein SAR1
20 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38


Gene co-expression network
sample Sobic002G052900 Sobic002G052900 Sobic001G124300 Sobic001G124300 Sobic002G052900--Sobic001G124300 Sobic004G253000 Sobic004G253000 Sobic002G052900--Sobic004G253000 Sobic001G371300 Sobic001G371300 Sobic002G052900--Sobic001G371300 Sobic010G083700 Sobic010G083700 Sobic002G052900--Sobic010G083700 Sobic004G320000 Sobic004G320000 Sobic002G052900--Sobic004G320000 Sobic002G352600 Sobic002G352600 Sobic002G052900--Sobic002G352600 Sobic004G153600 Sobic004G153600 Sobic002G052900--Sobic004G153600 Sobic010G168600 Sobic010G168600 Sobic002G052900--Sobic010G168600 Sobic001G098200 Sobic001G098200 Sobic002G052900--Sobic001G098200 Sobic009G054700 Sobic009G054700 Sobic001G124300--Sobic009G054700 Sobic001G124300--Sobic004G320000 Sobic001G124300--Sobic010G168600 Sobic010G067700 Sobic010G067700 Sobic001G124300--Sobic010G067700 Sobic009G172400 Sobic009G172400 Sobic001G124300--Sobic009G172400 Sobic004G349800 Sobic004G349800 Sobic001G124300--Sobic004G349800 Sobic010G264200 Sobic010G264200 Sobic001G124300--Sobic010G264200 Sobic004G094300 Sobic004G094300 Sobic001G124300--Sobic004G094300 Sobic004G034400 Sobic004G034400 Sobic001G124300--Sobic004G034400 Sobic003G050600 Sobic003G050600 Sobic004G253000--Sobic003G050600 Sobic004G253000--Sobic010G083700 Sobic004G253000--Sobic001G098200 Sobic003G015900 Sobic003G015900 Sobic004G253000--Sobic003G015900 Sobic003G250500 Sobic003G250500 Sobic004G253000--Sobic003G250500 Sobic004G059000 Sobic004G059000 Sobic004G253000--Sobic004G059000 Sobic001G051200 Sobic001G051200 Sobic004G253000--Sobic001G051200 Sobic009G246950 Sobic009G246950 Sobic004G253000--Sobic009G246950 Sobic003G000800 Sobic003G000800 Sobic004G253000--Sobic003G000800 Sobic003G273100 Sobic003G273100 Sobic001G371300--Sobic003G273100 Sobic002G291300 Sobic002G291300 Sobic001G371300--Sobic002G291300 Sobic001G478300 Sobic001G478300 Sobic001G371300--Sobic001G478300 Sobic004G274700 Sobic004G274700 Sobic001G371300--Sobic004G274700 Sobic001G427800 Sobic001G427800 Sobic001G371300--Sobic001G427800 Sobic004G079100 Sobic004G079100 Sobic001G371300--Sobic004G079100 Sobic001G371300--Sobic010G083700 Sobic001G056700 Sobic001G056700 Sobic001G371300--Sobic001G056700 Sobic001G149700 Sobic001G149700 Sobic001G371300--Sobic001G149700 Sobic006G263900 Sobic006G263900 Sobic010G083700--Sobic006G263900 Sobic010G083700--Sobic010G168600 Sobic001G054200 Sobic001G054200 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic008G174300 Sobic008G174300 Sobic004G320000--Sobic008G174300 Sobic004G320000--Sobic004G349800 Sobic001G512900 Sobic001G512900 Sobic004G320000--Sobic001G512900 Sobic004G320000--Sobic001G478300 Sobic010G260500 Sobic010G260500 Sobic004G320000--Sobic010G260500 Sobic004G320000--Sobic001G124300 Sobic009G027000 Sobic009G027000 Sobic004G320000--Sobic009G027000 Sobic004G203100 Sobic004G203100 Sobic004G320000--Sobic004G203100 Sobic003G333600 Sobic003G333600 Sobic004G320000--Sobic003G333600 Sobic002G352600--Sobic003G015900 Sobic010G027600 Sobic010G027600 Sobic002G352600--Sobic010G027600 Sobic009G228700 Sobic009G228700 Sobic002G352600--Sobic009G228700 Sobic004G121100 Sobic004G121100 Sobic002G352600--Sobic004G121100 Sobic009G217100 Sobic009G217100 Sobic002G352600--Sobic009G217100 Sobic001G121200 Sobic001G121200 Sobic002G352600--Sobic001G121200 Sobic010G000900 Sobic010G000900 Sobic002G352600--Sobic010G000900 Sobic004G066200 Sobic004G066200 Sobic002G352600--Sobic004G066200 Sobic003G248200 Sobic003G248200 Sobic002G352600--Sobic003G248200 Sobic001G424700 Sobic001G424700 Sobic004G153600--Sobic001G424700 Sobic003G081100 Sobic003G081100 Sobic004G153600--Sobic003G081100 Sobic004G153600--Sobic003G333600 Sobic009G137800 Sobic009G137800 Sobic004G153600--Sobic009G137800 Sobic004G153600--Sobic010G260500 Sobic007G078000 Sobic007G078000 Sobic004G153600--Sobic007G078000 Sobic003G324000 Sobic003G324000 Sobic004G153600--Sobic003G324000 Sobic002G284200 Sobic002G284200 Sobic004G153600--Sobic002G284200 Sobic008G094700 Sobic008G094700 Sobic004G153600--Sobic008G094700 Sobic010G168600--Sobic010G083700 Sobic001G078500 Sobic001G078500 Sobic010G168600--Sobic001G078500 Sobic010G168600--Sobic009G246950 Sobic002G352700 Sobic002G352700 Sobic010G168600--Sobic002G352700 Sobic010G168600--Sobic006G263900 Sobic010G168600--Sobic003G007500 Sobic009G171700 Sobic009G171700 Sobic010G168600--Sobic009G171700 Sobic010G168600--Sobic002G256300 Sobic004G104900 Sobic004G104900 Sobic010G168600--Sobic004G104900 Sobic004G234900 Sobic004G234900 Sobic001G098200--Sobic004G234900 Sobic006G225600 Sobic006G225600 Sobic001G098200--Sobic006G225600 Sobic001G098200--Sobic004G253000 Sobic002G251700 Sobic002G251700 Sobic001G098200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G098200--Sobic010G090900 Sobic001G098200--Sobic003G050600 Sobic004G301900 Sobic004G301900 Sobic001G098200--Sobic004G301900 Sobic001G098200--Sobic001G051200 Sobic003G044200 Sobic003G044200 Sobic001G098200--Sobic003G044200
Octagon: transcription factors


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